Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30425
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    26   0.32 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    26   0.32 
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    26   0.32 
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    26   0.32 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   5.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.9  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 130 INVWKKLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 240
           +NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 363 MNVWDGVCMCFI-YASLLEFVCVNYVGRKRPMHNVVY 398


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 130 INVWKKLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 240
           +NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 332 MNVWDGVCMCFI-YASLLEFVCVNYVGRKRPMHNVVY 367


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 130 INVWKKLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 240
           +NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 383 MNVWDGVCMCFI-YASLLEFVCVNYVGRKRPMHNVVY 418


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 130 INVWKKLPIGNLPYINLLYVVCLSFIGTPNPTNNMKF 240
           +NVW  + +  + Y +LL  VC++++G   P +N+ +
Sbjct: 332 MNVWDGVCMCFI-YASLLEFVCVNYVGRKRPMHNVVY 367


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 520 TVVFHGPAVGSLNSSELHLYTYIQKIVLCCSW 615
           T+V+    V S++S      TY+  I L  SW
Sbjct: 30  TIVYFHVTVLSIDSINEESMTYVADIFLAQSW 61


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 63  VINEKYKRAHSKTYPYLNYNVL 128
           VI E  +R HS   P L+Y+ +
Sbjct: 51  VIGEPCQRVHSSRIPDLSYDFI 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,355
Number of Sequences: 438
Number of extensions: 4942
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)