Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30425
         (736 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g62280.1 68416.m06997 GDSL-motif lipase/hydrolase family prot...    32   0.34 
At3g45800.1 68416.m04957 hypothetical protein                          30   1.4  
At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR) domai...    28   5.6  
At4g37390.1 68417.m05294 auxin-responsive GH3 family protein sim...    28   5.6  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    27   9.8  

>At3g62280.1 68416.m06997 GDSL-motif lipase/hydrolase family protein
           similar to Enod8.1 [Medicago truncatula] GI:18390045;
           contains InterPro Entry IPR001087 Lipolytic enzyme,
           G-D-S-L family
          Length = 343

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 559 SSELHLYTYIQKIVLCCSWYTTPNLVHTKTKCSQQNSSRGRD 684
           S++  LY ++  ++ CC +   PN    K  C Q  S+  RD
Sbjct: 262 SADFKLYGFVDPLMACCGYGGRPNNYDRKATCGQPGSTICRD 303


>At3g45800.1 68416.m04957 hypothetical protein
          Length = 563

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +2

Query: 458 PFTLVTINKLFNY*KEILSVLLLCSMVPQS-DHLTRRNYICILTY 589
           PF L+T + +F+  K ++S    C +  ++ D  +R NY+C +++
Sbjct: 72  PFNLITDSLIFHSSKRLVSSSCFCQVPSKAMDEPSRHNYLCSISH 116


>At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR)
           domain-containing protein domain signature TIR exists,
           suggestive of a disease resistance protein.
          Length = 546

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 117 YNVLNQCMEEITDRKSSIH*PIICSLPIIYRHTKSN 224
           Y     C+EE+   K  +H  ++  LPI Y+ T +N
Sbjct: 394 YTESKWCLEELVKIKERVHQGLLKVLPIFYKVTPTN 429


>At4g37390.1 68417.m05294 auxin-responsive GH3 family protein
           similar to auxin-responsive GH3 product [Glycine max]
           GI:18591; contains Pfam profile PF03321: GH3
           auxin-responsive promoter
          Length = 603

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 63  VINEKYKRAHSKTYPYLNYNVLNQCMEEI--TDRKSSIH*PIICSLPIIYRH 212
           V+   YK  H K  PY  YNV     E I  +D   S++  ++C L  + RH
Sbjct: 173 VLTSYYKSDHFKRRPYDPYNVYTSPNEAILCSDSSQSMYAQMLCGL--LMRH 222


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
           protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +3

Query: 432 HFPIKSKTNHLHWSQLISYLIIKKKYYQCY 521
           H P++  T  + W  ++ Y  ++K+Y   Y
Sbjct: 297 HLPLQFLTGRMSWEHVLKYTSLRKRYITQY 326


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,944,877
Number of Sequences: 28952
Number of extensions: 305284
Number of successful extensions: 637
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)