Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30424
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 49 6e-07
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 1e-06
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 42 7e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 40 3e-04
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.008
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 35 0.013
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 29 0.66
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 29 0.87
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 29 0.87
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 29 0.87
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 29 0.87
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c... 28 1.5
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 26 6.1
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 8.1
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 49.2 bits (112), Expect = 6e-07
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Frame = +1
Query: 181 NKVKFYKCDVTS-NDLETVYDNVIKEHKYIDVVVNCAG--IMNDRPNVYLKEIA----VN 339
+K+ K DVT +ET + + + +D+V+N AG ++ + + ++E+ VN
Sbjct: 47 SKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVN 106
Query: 340 VTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAV 492
+ + +A NLMR+ GKGG I+ ISS+ G + + L +Y A+K AV
Sbjct: 107 FWGVAYITKEALNLMRES--GKGGRILQISSVAGYYPSPCLSMYNASKFAV 155
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 48.0 bits (109), Expect = 1e-06
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +1
Query: 199 KCDVTSND-LETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKEIA--VNVTALITSSF- 366
+ DV+ D +ET + VI+ IDV++N AG+ +D P L + +V+ ++ ++
Sbjct: 51 QADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYL 110
Query: 367 -KAYNLMRKDHGGKGGTIINISSIVG-LFQASLLPVYAATKSAVLQFSTCLGMEPHYSHS 540
+ Y + GKGG+I+NI S+ G ++ S P Y+A K+ + + L + Y
Sbjct: 111 TQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGS--PAYSAAKAGLENLTKALAV--RYGPL 166
Query: 541 GVRV 552
G+RV
Sbjct: 167 GIRV 170
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 42.3 bits (95), Expect = 7e-05
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Frame = +1
Query: 175 KGNKVKFYKCDVTSN--DLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKE------I 330
KG + DV S+ +L++++++V ID VV+ AG++ V E I
Sbjct: 49 KGQQHTLTIADVQSDMKNLKSIFESV-----EIDTVVHAAGVLQSSLCVRTSEKEIDSII 103
Query: 331 AVN-VTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFST 507
N V+A+ S R + + I+NISS + + VYAA+K+ + F+
Sbjct: 104 CTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTK 163
Query: 508 CLGMEPHYSHSGVRVLTLCFGCTDTTLFSS 597
L E + G+RV + G DT + SS
Sbjct: 164 VLAAE--VASKGIRVNAISPGYVDTPMLSS 191
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 40.3 bits (90), Expect = 3e-04
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 5/127 (3%)
Frame = +1
Query: 157 ELNNNYKGNKVKFYKCDVTS-NDLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKEIA 333
EL + Y+ + + K DV+ + V +++ KE IDV++N AG+ V I
Sbjct: 50 ELESKYEVSVLPL-KLDVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNID 108
Query: 334 VNVTALITSSFKAYNLMRKD----HGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQF 501
VT + T+ + R + G I+N+ SI G VY +TKSA+ QF
Sbjct: 109 DAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQF 168
Query: 502 STCLGME 522
++ L E
Sbjct: 169 TSALRKE 175
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 35.5 bits (78), Expect = 0.008
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 2/191 (1%)
Frame = +1
Query: 109 IAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDVVVNCA 288
I+ L + + ++ D + + + K D + N + V D +K+ +IDV+VN
Sbjct: 71 ISCLPEERDDAEVTRDLIEREGRNCWIWEGKLDKSDNCRDLV-DFALKKLGWIDVLVNNI 129
Query: 289 GIMNDRPNVYLKEIAVNVTALITSSFKAYNLMRK--DHGGKGGTIINISSIVGLFQASLL 462
++ + T+ F + + + H G +I+N SSI L
Sbjct: 130 AYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKSGSSIVNCSSINAYVGRPDL 189
Query: 463 PVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTLFSSNKLGAFDKETEMLLE 642
Y +TK A+ F+ G+ Y+ G+RV + G T L SS F KE ++ L
Sbjct: 190 LDYTSTKGAITAFTR--GLSNQYAQHGIRVNAVAPGPIYTPLVSS----TFPKE-KIELS 242
Query: 643 DSIGTLPMQKP 675
D + M +P
Sbjct: 243 DQVPLGRMGQP 253
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 34.7 bits (76), Expect = 0.013
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTL 588
GTI+N++S+V + Y A+K+A+L +S L +E + GV+V ++ G T +
Sbjct: 128 GTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIE--LAPFGVQVTSIMTGGVQTKI 185
Query: 589 FSSNKLG 609
S LG
Sbjct: 186 -QSKPLG 191
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 29.1 bits (62), Expect = 0.66
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 415 IINISSIVGLFQASLLPV-YAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTLF 591
+I I+ +G +S+L Y S VL + LG S V ++ LCF C+ L
Sbjct: 299 MITIAGTMGHDFSSILNTPYGEPVSQVLYNN--LGKRGAVGVSAVLIIALCFNCSALCLA 356
Query: 592 SSNKLGAFDKE 624
SS ++ AF ++
Sbjct: 357 SSREIFAFARD 367
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 28.7 bits (61), Expect = 0.87
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +1
Query: 157 ELNNNYKGNKVKFYKCDVTS--NDLETVYDNVIKEHKY 264
E NNN +G K+K+YK TS +D+++ + ++ + KY
Sbjct: 642 EANNNGRGWKIKYYKGLGTSDHDDMKSYFSDLDRHMKY 679
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 28.7 bits (61), Expect = 0.87
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTL 588
G IIN+SSI G L +Y TK A+ S L E V+++ F T+ +
Sbjct: 94 GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRV 153
Query: 589 --FSSNKLGAFDKETEMLLEDSIGTLPMQKPDSAV 687
+ +D + L ED + L P +
Sbjct: 154 EEGAGKHYAEYDNLKQKLYEDLLPKLKTATPPQKI 188
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 28.7 bits (61), Expect = 0.87
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 121 DVDSVNGQILEDELNNNYKGNKVKFYKCDVTSNDLETVYD 240
+ + + G+++E +++ + G K K + S D+ETVYD
Sbjct: 129 ETEIIEGEVVEVQIDRSITGGN-KQGKLTIRSTDMETVYD 167
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 28.7 bits (61), Expect = 0.87
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTL 588
G IIN+SSI G L +Y TK A+ S L E V+++ F T+ +
Sbjct: 94 GMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEALTWEMQSIGVKVKIIEPGFTATEFRV 153
Query: 589 --FSSNKLGAFDKETEMLLEDSIGTLPMQKPDSAV 687
+ +D + L ED + L P +
Sbjct: 154 EEGAGKHYAEYDNLKQKLYEDLLPKLKTATPPQKI 188
>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 571
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 524 RTIVILESGCLHCASAAPTPHYSAVINSEHLTKKLKCY*K 643
+T V E+GC++C + PH SA ++ E + K K + K
Sbjct: 27 KTCVSNENGCINCRCSPSEPHESANVD-ESVNKLSKTFSK 65
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 226 ETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKEIAVNVTALITSSFKAYNLMRK 390
ET N+ + K++ + N+ P+VY K + T+L+ SS AY+ M++
Sbjct: 1032 ETTNLNLDSDKKFVRETYTSSNQTNE-PDVYDKPSNSSRTSLLRSSRSAYSKMKR 1085
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.1
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = -1
Query: 309 RSIIHYTSAVHDNIYIFMFFDH 244
R+IIH+ + DN+Y ++ ++
Sbjct: 68 RNIIHFVESFEDNVYYYVVLEY 89
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,831,067
Number of Sequences: 5004
Number of extensions: 56972
Number of successful extensions: 164
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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