Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30424
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 50 1e-06
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 42 5e-04
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 40 0.003
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 40 0.003
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 38 0.011
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 37 0.019
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 37 0.019
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 36 0.025
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 33 0.30
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 32 0.40
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 31 0.70
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30) 30 2.1
SB_27394| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 28 6.5
SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22) 28 6.5
SB_47554| Best HMM Match : Fip1 (HMM E-Value=4.4) 28 6.5
SB_35274| Best HMM Match : rve (HMM E-Value=7.2e-21) 28 6.5
SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 28 6.5
SB_26433| Best HMM Match : MAT1 (HMM E-Value=1.2) 28 6.5
SB_10391| Best HMM Match : Fip1 (HMM E-Value=4.4) 28 6.5
SB_3593| Best HMM Match : NAD4L (HMM E-Value=2.3) 28 6.5
SB_39878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_37595| Best HMM Match : Ribosomal_S11 (HMM E-Value=0) 28 8.6
SB_69| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 50.4 bits (115), Expect = 1e-06
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Frame = +1
Query: 109 IAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSN-DLETVYDNVIKEHKYIDVVVNC 285
+ LD++ G L+ NY ++V F KCDVTS +E + +D++ N
Sbjct: 32 VCMLDINEKTGNETLKLLSENYSKHRVLFIKCDVTSQPQMEAAFQRTKDVFGRLDILCNN 91
Query: 286 AGIM---ND--RPNVYLKEIAVNVTALITSSFKAYNLMRKDHG-GKGGTIINISSIVGLF 447
AGI ND R + I +NV +I + + M G GGTI+N++S+
Sbjct: 92 AGIAVRENDLLRSGAWKTIIDINVKGVILGTLLGLDHMGVSGAKGHGGTIVNVASLAESI 151
Query: 448 Q 450
Q
Sbjct: 152 Q 152
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 109 IAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSND-LETVYDNVIKEHKYIDVVVNC 285
+ +D+ G + L N + V F CDV++ D L+ + + H ++D+V N
Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFISCDVSNQDQLKDAFWETVSTHGHLDIVFNN 83
Query: 286 AGIMNDRPNVYLKEIAVNVTALITSSFKAYNLMRKDH 396
AGI+++ + K + VN+ I + ++ R++H
Sbjct: 84 AGILDEER--WSKTLDVNLLNSIEPRYNEHHYNRREH 118
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 41.9 bits (94), Expect = 5e-04
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Frame = +1
Query: 265 IDVVVNCAGIMNDRPNVYLKEIA-------VNVTALITSSFKAYNLMRKDHGGKGGTIIN 423
+DV+VN AGI+ + + E+A NV +A M GG GG I+N
Sbjct: 86 LDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNGGAIVN 145
Query: 424 ISSIVGLFQASLLPV-YAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTLFSS 597
+SS A + YAA K A+ S LG+ + G+RV + G +T + +S
Sbjct: 146 LSSAAARLGAPGEYIDYAAVKGAI--DSMTLGLAKEVAADGIRVNAVRPGVIETEIHAS 202
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 85 ILKEGAKHIAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSNDL-ETVYDNVIKEH- 258
+ +EGA +A LD++ GQ +E +L ++ GNKVKFY DV + D+ V V +H
Sbjct: 44 LAREGAS-VAILDINDELGQQVETDLRSS--GNKVKFYHVDVANKDMCAHVVGCVAADHG 100
Query: 259 KYIDVVVNCAGIMNDR 306
+ ++VN A +
Sbjct: 101 SAVHILVNNAAYFGSK 116
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 39.5 bits (88), Expect = 0.003
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +1
Query: 169 NYKGNKVKFYKCDVTSND-LETVYDNVIKEHKYIDVVVNCAGI-----MNDRPNVYLKE- 327
N G+ + + DV+S+D +E + + +E ID++VN AGI + + +KE
Sbjct: 52 NALGDTLFIRELDVSSDDSVEEALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKET 111
Query: 328 IAVNVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFST 507
N ++ S M+ DH G IINISS G +Y A+K AV S
Sbjct: 112 FNTNFFGVLRMSKAVIPRMKSDHSGH---IINISSTAGHTGMPFTGLYCASKFAVEGLSE 168
Query: 508 CL 513
L
Sbjct: 169 SL 170
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/89 (34%), Positives = 44/89 (49%)
Frame = +1
Query: 337 NVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLG 516
NV L+ S A N D G+ G I+N+SSI G S YAATK A+ + L
Sbjct: 404 NVARLVAESM-ATNT--PDQEGERGVIVNVSSIHGTEGQSGKVAYAATKGAINAMT--LP 458
Query: 517 MEPHYSHSGVRVLTLCFGCTDTTLFSSNK 603
M + G+RV T+ G +T +F + +
Sbjct: 459 MARDLAKLGIRVNTISPGIFNTPMFMAGR 487
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 37.5 bits (83), Expect = 0.011
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Frame = +1
Query: 157 ELNNNY--KGNKVKFYKCDVTSNDLETVY-DNVIKEHKYIDVVVNCAGIMNDRPNVYLKE 327
E+N Y KG +FY D+T + + + NV K D V+N AG +N N L E
Sbjct: 41 EMNEKYCGKGKPNQFYVVDITDDSVVKEWATNVCKSFGPPDFVLNNAGFVNQ--NAPLWE 98
Query: 328 I-AVNVTALITSSFK-AYNLMRKD-----HGGKGGTIINISSIVGLFQASLLPVYAATKS 486
I A ++ + K + N++R GKG I+N SS G + + Y ATK
Sbjct: 99 ITAEEFDKVVDVNLKGSANVIRSFLPKMIKAGKG-VIVNFSSGYGKAGKAKMAPYCATKW 157
Query: 487 AVLQFSTCLGME 522
+ + L ME
Sbjct: 158 GIEGLTRALAME 169
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/90 (20%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +1
Query: 109 IAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSND-LETVYDNVIKEHKYIDVVVNC 285
+ +D+ +G ++ L + +F +CDV + + L +K+H +D++ N
Sbjct: 66 VRIIDICINSGLKAQENLEAQFGPGTAEFIECDVCNREKLSEAIRQTVKDHSKLDILCNN 125
Query: 286 AGIMNDRPNVYLKEIAVNVTALITSSFKAY 375
AGI++++ + K + +N+ + + Y
Sbjct: 126 AGIIDEKN--WPKSVELNLFSQFIEGYSGY 153
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 36.7 bits (81), Expect = 0.019
Identities = 36/111 (32%), Positives = 49/111 (44%)
Frame = +1
Query: 316 YLKEIAVNVTALITSSFKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVL 495
Y K VN+ LI + L+RK GG ++NISSI G Y+ TK V
Sbjct: 13 YKKMADVNLWGLIDVTLTFLPLIRKC----GGRVVNISSIAGRLSIPNTGPYSVTKYGVE 68
Query: 496 QFSTCLGMEPHYSHSGVRVLTLCFGCTDTTLFSSNKLGAFDKETEMLLEDS 648
FS L E S GV+V + G T + GA +K+ + L E +
Sbjct: 69 AFSDALRRE--VSPWGVKVTLVEPGGFHTRFLAE---GALEKKLQTLWESA 114
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 36.3 bits (80), Expect = 0.025
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTTL 588
G ++N+SSI G+ + Y+ TK V FS L E S GVRV+ + G T L
Sbjct: 71 GRVVNVSSIAGIVVVPSMAAYSITKYGVEAFSDALRRE--MSPWGVRVIIIEPGGFKTPL 128
Query: 589 FSSNKL 606
+ K+
Sbjct: 129 WDEQKI 134
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 36.3 bits (80), Expect = 0.025
Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 24/229 (10%)
Frame = +1
Query: 91 KEGAKHIAALDVDS-VNGQILEDELNNNYKGNKVKFYKCDVTSN-DLETVYDNVIKEHKY 264
K GAK I +D++ N Q +E + N K YKCD +S D+ V D V +E
Sbjct: 75 KIGAK-IVCVDINKQANDQTVEVIKSLNQKAFG---YKCDCSSREDIYRVADIVKREVGE 130
Query: 265 IDVVVNCAGIMNDRPNV------YLKEIAVNVTA-------------LITSSFKAY--NL 381
+ ++VN AGI++ + + K + VN A + K++ ++
Sbjct: 131 VTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTVKSFLPSM 190
Query: 382 MRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME-PHYSHSGVRVLT 558
+ K+HG ++NI+S G F + Y ++K + F L ME +GV+
Sbjct: 191 LAKNHGH----VVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELSSLGKTGVKTTV 246
Query: 559 LCFGCTDTTLFSSNKLGAFDKETEMLLEDSIGTLPMQKPDSAVKGLLDA 705
+C +T +F K T L LP+ PD VK ++DA
Sbjct: 247 VCPYYINTGMFDGVK-------TRFPL-----LLPILDPDWVVKEIVDA 283
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +1
Query: 178 GNKVKFYKCDVTSND-LETVYDNVIKEHKYIDVVVNCAGIM 297
G +V+++K DVTSND + + +V +++ +D++VN AGI+
Sbjct: 71 GGRVEYHKLDVTSNDSIHELTLHVQEKYGGLDILVNNAGIL 111
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 33.5 bits (73), Expect = 0.17
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Frame = +1
Query: 91 KEGAKHIAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYID 270
+EGAK IA +N + L+ EL++ G + + DVT D E + E +D
Sbjct: 38 REGAKVIAT----DINAEKLK-ELHS-VPGIETRVV--DVT--DYEAI-KKFASEVDRVD 86
Query: 271 VVVNCAGIM--NDRPNVYLKEIAVNVTALITSSFK-AYNLMRKDHGGKGGTIINISSIVG 441
V+ NCAG++ + K+ + + + S F+ + K G+IIN++S+
Sbjct: 87 VLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKMRQQGSGSIINMASVAS 146
Query: 442 LFQ-ASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFG 570
+ A Y +K+AV+ F+ + + Y G+RV +C G
Sbjct: 147 SIKGAPNRFAYGTSKAAVIGFTKAIAAD--YITKGIRVNAVCPG 188
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.5 bits (73), Expect = 0.17
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Frame = +1
Query: 205 DVTSND-LETVYDNVIKEHKYIDVVVNCAGI------MNDRPNVYLKEIAVNVTALITSS 363
DV S++ ++ V ++++ IDV+VN AGI + K NV L+ +
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 364 FKAYNLMRKDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSG 543
M+K + G ++NI S++G+ +Y A+K AV ++ M P
Sbjct: 155 NAVIPHMKKQ---RAGHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAE--AMAPVLGKFN 209
Query: 544 VRVLTLCFGCTDTTLFSSNK-------LGAFDKETEMLLEDSI 651
++ + G T S+ K + D++T+ LL+ ++
Sbjct: 210 IKTTIIEPGPVATNFASNAKAIRDEVDISGTDEQTQALLKSAL 252
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 522
G ++N+SSIVGL L Y+ TK V FS L E
Sbjct: 41 GRVVNVSSIVGLIANELTAPYSITKYGVEAFSDVLRRE 78
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 522
G ++N++SIVGL L Y+ TK V FS L E
Sbjct: 207 GRVVNVASIVGLIAGELTAPYSITKYGVEAFSDVLRRE 244
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 522
G ++N++S VGL L Y+ TK V FS L E
Sbjct: 514 GRVVNVASTVGLIANELTAPYSITKYGVEAFSDVLRRE 551
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 32.7 bits (71), Expect = 0.30
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +1
Query: 226 ETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLKEI------AVNVTALITSSFKAYNLMR 387
+ V + IK IDVVVN AGI+ D+ + + E+ V++ + A+ M+
Sbjct: 81 DQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLVTRAAWPHMK 140
Query: 388 KDHGGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 522
K K G II +S G++ Y+A K ++ S L E
Sbjct: 141 KQ---KFGRIIMTTSTSGIYGNFGQANYSAAKLGLVGLSNTLAQE 182
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 32.3 bits (70), Expect = 0.40
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = +1
Query: 259 KYIDVVVNCAGIMNDRPNVYL------KEIAVNVTALITSSFKAYNLMRKDHGGKGGTII 420
K + +VN AGI + P ++ + VNV L+ + L++K G I+
Sbjct: 623 KVLWAIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLLKKSCG----RIV 678
Query: 421 NISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRVLTLCFGCTDTT 585
N++S G L Y+A+K AV FS L +E V ++ F T+ T
Sbjct: 679 NVASCAGKLPGPGLSAYSASKYAVQSFSDALRIEMRPFGVSVHIIDPGFFKTNLT 733
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCL--GMEPHYSHS 540
G ++N SSI G+ +L Y+ TK V FS L M P+ S S
Sbjct: 161 GRVVNFSSIAGVATPALRAAYSVTKYGVESFSDALRREMAPYESES 206
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 31.5 bits (68), Expect = 0.70
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +1
Query: 238 DNVIKEHKYIDVVVNCAGIMNDRP------NVYLKEIAVNVT-ALITSSFKAYNLMRKDH 396
+ +I+ IDV+VN AG M P + + K V+V A + S A ++++
Sbjct: 108 EKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQ-- 165
Query: 397 GGKGGTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGME 522
G+GG IINI+S+ Y A K A+ + + +E
Sbjct: 166 -GQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALE 206
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +1
Query: 409 GTIINISSIVGLFQASLLPVYAATKSAVLQFSTCLGMEPHYSHSGVRV 552
G ++NISSI G F YA TK V FS M + GVRV
Sbjct: 306 GRVVNISSIYGFFSPIFGSHYAITKYGVEAFSD--SMRREMARWGVRV 351
>SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30)
Length = 662
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 TVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLK-EIAVNVTALITSSFKAYNLMRKDHGGK 405
TV DN KEH +NCA ++N ++ + E++ V + T + M K
Sbjct: 404 TVSDNQQKEHASNSRDLNCAEVINPNGELFEEDEVSEQVKSPSTQDKEGEKEMHKGREAS 463
Query: 406 GGTII 420
G TII
Sbjct: 464 GRTII 468
>SB_27394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 524 RTIVILESGCLHCASAAPTPHYSAVINSEHLTKK 625
R + I E GCL+ ++A P ++ A ++ + TKK
Sbjct: 49 RVLKIDEQGCLNASTAMPADYFDAFEDNHNATKK 82
>SB_56362| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 468
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 225 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 264
>SB_55817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 478 TKSAVLQFSTCLGME-PHYSHSG-VRVLTLCFGCTDTTLF 591
TK QFS L + P+Y + ++++ FGCTDT LF
Sbjct: 893 TKRRSNQFSRPLAVPIPYYLYQAPIQLVFTTFGCTDTILF 932
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 482 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 521
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = +1
Query: 88 LKEGAKHIAALDVDSVNGQILEDELNNNYKGNKVKFYKCDVTSNDLETVYD 240
L + ++ + + + + G+++E +++ G K K + + ++ET+YD
Sbjct: 218 LTQPSESLLVEETEIIEGEVVEVQIDRPTTGTGAKVGKLTLKTTEMETIYD 268
>SB_12637| Best HMM Match : rve (HMM E-Value=3.7e-22)
Length = 1072
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 38 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 77
>SB_47554| Best HMM Match : Fip1 (HMM E-Value=4.4)
Length = 238
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 38 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 77
>SB_35274| Best HMM Match : rve (HMM E-Value=7.2e-21)
Length = 803
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 38 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 77
>SB_31343| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 449
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 257 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 296
>SB_26433| Best HMM Match : MAT1 (HMM E-Value=1.2)
Length = 394
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 38 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 77
>SB_10391| Best HMM Match : Fip1 (HMM E-Value=4.4)
Length = 239
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 593 AVINSEHLTKKLKCY*KTASEHYPCRNLIPPSRAC*MRTE 712
A + ++H + K + +TASE YP ++ + C +RTE
Sbjct: 38 AELKAKHAHMRDKSFYRTASEEYPIHVILSDAFYCKIRTE 77
>SB_3593| Best HMM Match : NAD4L (HMM E-Value=2.3)
Length = 277
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = -2
Query: 359 LVIRAVTLTAISFRYTLGLSFIIPAQFTTTSIYLCSLITLSYTVSKSLLVTS 204
+++ +T TAI + ++ I+ TTT+ + LIT + T+ ++T+
Sbjct: 89 MIVLFITTTAIMIALIITITTIVIVFITTTTPIMIVLITTTTTIMNVFIITT 140
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 344 VTLTAISFRYTLGLSFIIPAQFTTTSIYLCSLITLSYTVSKSLLVTS 204
+T TAI + ++ I+ TTT+ + LIT + T+ L++T+
Sbjct: 226 ITTTAIMIALIITITTIVIVFITTTTPIMIVLITTTTTIMNVLIITT 272
>SB_39878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/66 (21%), Positives = 30/66 (45%)
Frame = +1
Query: 145 ILEDELNNNYKGNKVKFYKCDVTSNDLETVYDNVIKEHKYIDVVVNCAGIMNDRPNVYLK 324
I+ +EL+ + K V + + +ND +YD + + V+ + P+V
Sbjct: 979 IIYEELSTHTKDPNVIYDELSTHNNDASVLYDELSTHNNDASVISEELSTQTNDPSVIHH 1038
Query: 325 EIAVNV 342
E++ N+
Sbjct: 1039 ELSTNI 1044
>SB_37595| Best HMM Match : Ribosomal_S11 (HMM E-Value=0)
Length = 543
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 238 DNVIKEHKYIDVVVNCAGIMNDRPNVYLKEIAVNVTALITSSFKAYNLMRKDHGGKGGTI 417
D++ K ++ N I + P + L + N + + SS+ NL+ H G+G +
Sbjct: 140 DSLAKNRGKVESEQNSTVIQSSEPKIMLY-VFYNKSTMPCSSYFVLNLLGWRHVGEGELV 198
Query: 418 INISSIVGLFQASLLPV 468
++ I F + + V
Sbjct: 199 FGVAHIFASFNDTFVHV 215
>SB_69| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 130 SVNGQILEDELNNNYKGNKVKFYKCDVTSNDLET 231
SV G+ LE+ N N V+F+KC + N+ T
Sbjct: 576 SVPGKRLENSKNENVSFCVVEFHKCSILHNERTT 609
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.135 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,385,898
Number of Sequences: 59808
Number of extensions: 447384
Number of successful extensions: 1178
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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