Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30423
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7UAL0 Cluster: Ornithine decarboxylase antizyme; n=1; ...    37   0.56 
UniRef50_A2QIY3 Cluster: Complex: the S. pombe proteins scd1; n=...    36   0.98 
UniRef50_A5AI05 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q870Z0 Cluster: Related to ornithine decarboxylase anti...    34   3.0  
UniRef50_A5B9W0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_Q4QAI5 Cluster: Putative uncharacterized protein; n=2; ...    34   4.0  
UniRef50_A6R1W5 Cluster: Predicted protein; n=1; Ajellomyces cap...    34   4.0  
UniRef50_Q22SU8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_A6LR89 Cluster: Radical SAM domain protein; n=1; Clostr...    33   9.2  

>UniRef50_A7UAL0 Cluster: Ornithine decarboxylase antizyme; n=1;
           Paracoccidioides brasiliensis|Rep: Ornithine
           decarboxylase antizyme - Paracoccidioides brasiliensis
          Length = 272

 Score = 36.7 bits (81), Expect = 0.56
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -3

Query: 583 EIQVLRSHYSYNGCPALQTETHYCFTAEIGRAVVPPVPT-HNSQEVLPPVIISNNSV 416
           + QVL S YS N C    +  HYC T   G    P VP+ H      PP   S  +V
Sbjct: 24  QTQVLASCYSVNPCTGSLSSFHYCTTVGTGAQWYPEVPSGHKFPPTSPPTKYSATAV 80


>UniRef50_A2QIY3 Cluster: Complex: the S. pombe proteins scd1; n=8;
           Trichocomaceae|Rep: Complex: the S. pombe proteins scd1
           - Aspergillus niger
          Length = 924

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
 Frame = -3

Query: 484 VPPVPTHNSQEVLPPVIISNNS-----VPELNISGKSRSRRVKEPHKAP-----EPQVAD 335
           VPP+P H S  + PP    NNS     +P  N +  S S++  +P   P     EPQ +D
Sbjct: 739 VPPIPAHISSMMAPPNRSQNNSPTNANLPIRNANHLSNSQQHSDPRHVPQTHFHEPQYSD 798

Query: 334 Y*P 326
           Y P
Sbjct: 799 YRP 801


>UniRef50_A5AI05 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1031

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 708 SNEESDEEEVSKMFTRLLQSPSGVKWLLEPID 613
           +N ES +EE+ + F +L  SPSG  W +E +D
Sbjct: 358 NNSESIKEEILRYFEKLYXSPSGEPWRVEXLD 389


>UniRef50_Q870Z0 Cluster: Related to ornithine decarboxylase
           antizyme; n=3; Sordariales|Rep: Related to ornithine
           decarboxylase antizyme - Neurospora crassa
          Length = 331

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
 Frame = -3

Query: 589 HLE-IQVLRSHYSYNGCPALQTE-THYCFTAEIGRAVVPPVPTHN--SQEVLPPVIISNN 422
           H+E + +L S Y  +  P  Q +  HYC T   G    P VP+    S    PP+   + 
Sbjct: 28  HMEAVDILASCYLVSNYPGAQLKGLHYCTTGVTGAEWYPEVPSTGLPSPPSSPPLAALDT 87

Query: 421 SVPELNISGKSRS 383
           S  +L ++ K++S
Sbjct: 88  STNQLAVTAKAKS 100


>UniRef50_A5B9W0 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1072

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 708 SNEESDEEEVSKMFTRLLQSPSGVKWLLEPIDIYNVNAPPTLR 580
           +N ES +EE+ + F +L  SPSG  W +E +D + ++     R
Sbjct: 679 NNLESIKEEILRYFEKLYASPSGEPWRVEGLDWFPISGESASR 721


>UniRef50_Q4QAI5 Cluster: Putative uncharacterized protein; n=2;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 812

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = -3

Query: 544 CPALQTETHYCFTAEIGRAVVPPVPTHNSQEVLPPV--IISNNSVPELNISGKSRSRRVK 371
           C AL+T   YC +   G A  PP P+HNS  +       + ++S+P       +RS++ +
Sbjct: 112 CAALETPRRYCASLS-GVAHAPPTPSHNSPRLRGSYRKRLPSSSLPSSASRYTTRSQQHR 170

Query: 370 EPHKAPEPQVADY*PRRVP 314
           +  +AP  +     PRR P
Sbjct: 171 QRAQAPSGRPPR--PRREP 187


>UniRef50_A6R1W5 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 240

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -3

Query: 583 EIQVLRSHYSYNGCPALQTETHYCFTAEIGRAVVPPVPT-HNSQEVLPPVIISNNSVPEL 407
           E +VL S YS N   A     HYC T   G   +P VPT H    + PP  +S  +    
Sbjct: 7   ETKVLASCYSVNTRSATLNSFHYCTTEPSG---IPEVPTGHKFPPISPPTNVSATAAASA 63

Query: 406 NISGKSR 386
            ++ + R
Sbjct: 64  VVADQFR 70


>UniRef50_Q22SU8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 625

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 508 TAEIGRAVVPPVPTHNSQEVLPPVIISNN 422
           T  IG+  +PP PT+  Q+ LPP  + NN
Sbjct: 484 TGYIGQGQIPPPPTNQQQQQLPPHFMPNN 512


>UniRef50_A6LR89 Cluster: Radical SAM domain protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Radical SAM
           domain protein - Clostridium beijerinckii NCIMB 8052
          Length = 436

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 17/50 (34%), Positives = 33/50 (66%)
 Frame = +2

Query: 257 KNCSFLGEFFSRLLGEEIEWYSSRSVISNLRLGSLMRLFNSTATALPRNI 406
           KN + + ++  R++ EEIE Y+S+  I NLR+ +++ +   T T LP+++
Sbjct: 67  KNTNEIPKYKDRII-EEIENYASKEYIKNLRV-NVIHIGGGTPTILPKDV 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,314,743
Number of Sequences: 1657284
Number of extensions: 14482229
Number of successful extensions: 32560
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32542
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)