Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30423
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    29   0.037
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   3.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 29.1 bits (62), Expect = 0.037
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 517 NAFRFEGRGSRCNYSETLELVSQGGWRI 600
           N+ ++ G      Y+E +EL  +GGW++
Sbjct: 286 NSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 517 NAFRFEGRGSRCNYSETLELVSQGGW 594
           +A R+ G      Y+E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 328 PRRVPLDLFS*KTTK 284
           PRRVP DLF  K  K
Sbjct: 333 PRRVPFDLFENKKRK 347


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 190 LSKKSYNTLYRYCNT 234
           LS K ++TLYR C T
Sbjct: 19  LSCKDFDTLYRDCTT 33


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 330 DLDEYHSISSPKRRLKN 280
           D+D++H +  PK  L N
Sbjct: 372 DMDDFHGLCGPKNPLIN 388


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -1

Query: 492 GRWYLPCRLTTHKRSYH 442
           G WYL C     K S H
Sbjct: 461 GHWYLDCGFGPWKPSMH 477


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 332 VISNLRLGSLMRLFNST 382
           +ISN+ L SL+ LFN T
Sbjct: 236 LISNISLVSLIFLFNCT 252


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 633 WLLEPIDIYNVNAPPTLRYK 574
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 35  HLLLNKYRRAQRSQFNSPTIKYEAKISFFLYKGYSILQ 148
           +L+LNKY   + S+   P +         LYK   I+Q
Sbjct: 29  YLVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKLLGIIQ 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,399
Number of Sequences: 336
Number of extensions: 3812
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)