Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30423
         (711 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   4.7  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   4.7  
AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p pro...    29   6.2  
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...    29   6.2  
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...    29   6.2  
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA...    29   6.2  
AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    29   8.2  

>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 490   AVVPPVPTHNSQEVLPPVIISNNSVPELNISGKSRSRRVKEPHKAPEPQVADY 332
             AV+P  PT      L   II   + P+  +        V+EP KAPE Q  D+
Sbjct: 13874 AVIPEQPTEEEAADLKITIIEEETPPQELVQEIEEIEIVEEP-KAPEEQPTDF 13925


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -3

Query: 490   AVVPPVPTHNSQEVLPPVIISNNSVPELNISGKSRSRRVKEPHKAPEPQVADY 332
             AV+P  PT      L   II   + P+  +        V+EP KAPE Q  D+
Sbjct: 15733 AVIPEQPTEEEAADLKITIIEEETPPQELVQEIEEIEIVEEP-KAPEEQPTDF 15784


>AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p
           protein.
          Length = 857

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 493 RAVVPPVPTHN--SQEVLPPVIISNNSVP-ELNIS-GKSRSRRVKEPHKAPEPQVAD 335
           R  V P  T+   S+E  PPV+IS  S P +LN S  +SR     EP +  E  V D
Sbjct: 674 RGSVEPPSTYEQWSEEEEPPVVISEKSNPRDLNRSRARSRGEWEPEPPRHLERSVRD 730


>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 493 RAVVPPVPTHN--SQEVLPPVIISNNSVP-ELNIS-GKSRSRRVKEPHKAPEPQVAD 335
           R  V P  T+   S+E  PPV+IS  S P +LN S  +SR     EP +  E  V D
Sbjct: 823 RGSVEPPSTYEQWSEEEEPPVVISEKSNPRDLNRSRARSRGEWEPEPPRHLERSVRD 879


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 493 RAVVPPVPTHN--SQEVLPPVIISNNSVP-ELNIS-GKSRSRRVKEPHKAPEPQVAD 335
           R  V P  T+   S+E  PPV+IS  S P +LN S  +SR     EP +  E  V D
Sbjct: 823 RGSVEPPSTYEQWSEEEEPPVVISEKSNPRDLNRSRARSRGEWEPEPPRHLERSVRD 879


>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
            isoform A protein.
          Length = 1553

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 21/70 (30%), Positives = 34/70 (48%)
 Frame = -3

Query: 508  TAEIGRAVVPPVPTHNSQEVLPPVIISNNSVPELNISGKSRSRRVKEPHKAPEPQVADY* 329
            TA+  RA  PP     S  V+P  +++++ VP  N S +S+  ++      PE     Y 
Sbjct: 1415 TADSSRA--PPEKMEQSLFVIPSHMLNSSLVPAANASDQSQRSQLYRDLDGPED---GYE 1469

Query: 328  PRRVPLDLFS 299
            P   P D+F+
Sbjct: 1470 PCYRPFDIFA 1479


>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 672 MFTRLLQSPSGVKWLLEPIDIYNVNAPPTLRYK 574
           ++TRL    S + W+L  +D Y V +PP ++Y+
Sbjct: 231 VYTRL---SSFIDWILMVVDNYTVRSPPKIQYR 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,627,533
Number of Sequences: 53049
Number of extensions: 700492
Number of successful extensions: 1545
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)