Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30423
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 3.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.0
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 6.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.6
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
Frame = -1
Query: 321 EYHSISSPKRRLKN-SPRN 268
E+ SSPK+R KN P+N
Sbjct: 18 EFEGASSPKKRNKNPQPKN 36
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKI 81
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKI 81
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 285 NENSYRKYRETSKERSRDRKERERSKEPKI 314
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -3
Query: 430 SNNSVPELNISGKSRSRRVKEPHKAPEPQV 341
+ NS + + K RSR KE ++ EP++
Sbjct: 285 NENSYRKYRETSKERSRDRKERERSKEPKI 314
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -3
Query: 490 AVVPPVPTHNSQEVLPPVIISNNSVPEL 407
A +PP+P ++ +PP+ S+P +
Sbjct: 415 APMPPIPNMSNMSGMPPLPNMPGSMPTM 442
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 63 LRDRNLIHPP*NMKLKSHFFC 125
L +N HP +KLK + FC
Sbjct: 33 LNCKNYDHPTTLLKLKRYLFC 53
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 523 THYCFTAEIGRAVVPPVPTHNSQEVLPPVIISNNSV 416
T + T ++ + V V + + V+PPVI+ N+ V
Sbjct: 211 TMHRLTRQVVVSSVANVRIADHRGVMPPVILENSGV 246
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 523 THYCFTAEIGRAVVPPVPTHNSQEVLPPVIISNNSV 416
T + T ++ + V V + + V+PPVI+ N+ V
Sbjct: 211 TMHRLTRQVVVSSVANVRIADHRGVMPPVILENSGV 246
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,730
Number of Sequences: 438
Number of extensions: 4959
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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