Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30422
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0816 + 11487811-11488708,11488835-11489235                       29   2.2  
03_01_0453 - 3471656-3471819,3472416-3472580,3473062-3473145,347...    28   6.6  
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901...    28   6.6  
10_06_0087 - 10520708-10520823,10521041-10521130,10521571-105219...    27   8.7  
03_05_0324 - 23121401-23121465,23121507-23122059                       27   8.7  

>03_02_0816 + 11487811-11488708,11488835-11489235
          Length = 432

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 346 RNSVGCVCGLIRSSSPSYRESFNKK 420
           R SVGC+ GL+R  SP +R    K+
Sbjct: 22  RRSVGCMAGLLRLLSPYHRSHHRKR 46


>03_01_0453 -
           3471656-3471819,3472416-3472580,3473062-3473145,
           3473304-3473375,3473496-3473574,3473894-3473990,
           3474064-3474116,3474257-3474386,3474464-3474498,
           3476108-3476212,3476759-3476833,3477671-3477799,
           3477918-3478097,3478737-3478820,3478943-3479059,
           3479170-3479242,3479316-3479437,3479519-3479641,
           3479917-3479989,3480218-3480396,3480699-3480837,
           3481105-3481259,3481570-3481875
          Length = 912

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 392 GLDERINPQTQPTEFLAGDSQW 327
           G D++ +P   PT+F AG++ W
Sbjct: 491 GHDDKAHPPIHPTKFSAGETNW 512


>01_06_1729 +
           39486553-39487413,39487953-39488020,39489574-39490154,
           39490623-39491432,39491738-39493035
          Length = 1205

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 349 NSVGCVCGLIRSSSPSYRESFNKKSNYCNDNSI 447
           N+VGCV   + SSS   +E  + ++ +CN +S+
Sbjct: 564 NNVGCVGTKLSSSSTERQERPSSQNAHCNGSSV 596


>10_06_0087 -
           10520708-10520823,10521041-10521130,10521571-10521901,
           10522248-10522409,10522506-10522726,10523852-10524056
          Length = 374

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 255 DDVANTNPNKSCASQNLPPDRKRDPLRISGEKLSGLCLWVNSLV 386
           DD+ N    + C + N+P +RK   L+   E       W N  V
Sbjct: 155 DDILNAGDKQICLNANVPNERKEFYLQYLAELEEQNAAWSNQAV 198


>03_05_0324 - 23121401-23121465,23121507-23122059
          Length = 205

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 291 ASQNLPPDRKRDPLRISGEKLSGLC 365
           A+++ PPD+K +P RI+ E     C
Sbjct: 128 AAKSCPPDKKHEPTRITSEATRTWC 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,822,810
Number of Sequences: 37544
Number of extensions: 238882
Number of successful extensions: 558
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)