Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30422
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    28   0.27 
AY825824-1|AAV70387.1|  161|Anopheles gambiae heat shock protein...    23   5.8  
AY825823-1|AAV70386.1|  161|Anopheles gambiae heat shock protein...    23   5.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 GLKPDDVANTNPNKSCASQNLPPDRKRDPLRIS 341
           G+K DD+ N   N   + + +PP R R+P R S
Sbjct: 230 GIKADDIENIYKNAHASIRKIPPSR-RNPRRRS 261


>AY825824-1|AAV70387.1|  161|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 161

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 319 NATH*ESPAR----NSVGCVCGLIRSSSPSYRESFNKKSNYCNDNS 444
           NA H E   R    +S+ CV  ++   +  Y++S     + CN NS
Sbjct: 116 NAGHEEQLVRKVGVHSLPCVIMVLNDHNYVYKDSVFNPQHVCNSNS 161


>AY825823-1|AAV70386.1|  161|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 161

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +1

Query: 319 NATH*ESPAR----NSVGCVCGLIRSSSPSYRESFNKKSNYCNDNS 444
           NA H E   R    +S+ CV  ++   +  Y++S     + CN NS
Sbjct: 116 NAGHEEQLVRKVGVHSLPCVIMVLNDHNYVYKDSVFNPQHVCNSNS 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,178
Number of Sequences: 2352
Number of extensions: 9331
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)