Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30422
         (607 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.11 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.76 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.76 
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.4  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   5.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.4  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 588 MKMRVFESPDKEFQMRELFSCFCNVPC 508
           ++  + ESPDK+  + E+++ F N  C
Sbjct: 513 IRQSIIESPDKQLTLNEIYNWFQNTFC 539


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 491 SLSKIVQGTLQKQENSSRIWNSLSGDSNTRIFIGPRPHL 607
           S++ I+QGT  +  +    W SL   + +   +GP+  L
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL 48


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 491 SLSKIVQGTLQKQENSSRIWNSLSGDSNTRIFIGPRPHL 607
           S++ I+QGT  +  +    W SL   + +   +GP+  L
Sbjct: 10  SVTAIIQGTQAQHWSRGNTWLSLDNSNMSMSSVGPQSPL 48


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 398  YEGLDERINPQTQPTEFLAGDS 333
            Y+  +   NP  +PTE+L  DS
Sbjct: 964  YKSSESSCNPDQKPTEYLLEDS 985


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 296 AESTTGSETRPTENLRRETQ 355
           A  TTG+ T PT  LR+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 482 FCHSLSKIVQGTLQKQENSSRIWNSLSGDSNTRIFIGPRPHL 607
           FC ++  +    L K    SRI+N+    +    FI PR  L
Sbjct: 730 FCFTV--VYAALLTKTNRISRIFNASKHSAKRPSFISPRSQL 769


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 46  PIIIIVFDNKKDQGLVLIHSVVSYS 120
           P I I  DN+K  G+V I ++  Y+
Sbjct: 403 PSIFISDDNQKLTGIVQISNMTEYN 427


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 KWYTATYRNAIYEYETT 105
           K Y  TY+N+IY+   T
Sbjct: 64  KKYCETYKNSIYDVSMT 80


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 369 WVNSLVEPFV 398
           W+NS + PF+
Sbjct: 349 WINSAINPFI 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,671
Number of Sequences: 438
Number of extensions: 3133
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)