Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30419
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 91 8e-19
11_02_0011 - 7337618-7338496,7338596-7338991 73 2e-13
01_01_1152 + 9170628-9171899 73 2e-13
04_04_0619 + 26652923-26653267,26653440-26654273 72 6e-13
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 71 1e-12
11_02_0012 - 7346282-7347136,7347234-7347593 69 3e-12
11_01_0767 + 6438648-6438809,6439146-6440000 69 3e-12
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 66 3e-11
11_01_0750 - 6315126-6315896,6316371-6316784 65 5e-11
11_02_0014 - 7352619-7352918,7353173-7353418 61 1e-09
11_01_0771 + 6453130-6454488 56 4e-08
05_06_0044 - 25150322-25151260 52 4e-07
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 2.2
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 2.9
02_01_0384 - 2781362-2782299,2782320-2782428 29 3.9
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 5.1
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 6.7
01_06_0373 - 28841462-28842850 28 8.9
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 91.1 bits (216), Expect = 8e-19
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Frame = +1
Query: 157 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIG---FPDDDAIRTE-----FASKSRDL 312
K++ +S S+ LA L + GET ++++ +G P A+ + A S
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 313 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 489
G +++ AN V+V +L +A V D + ++ + + F K A + IN+W E
Sbjct: 92 DDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFES 151
Query: 490 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
T RIKD + D++ AT VL NA+YFKG W SKFD R TSD FY+ + P M
Sbjct: 152 ATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM 211
Query: 670 YKRGDYXYGESAALNAQLIXIPY 738
G + Y A +++ +PY
Sbjct: 212 -SSGKWQYIACRA-GYKVLRLPY 232
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 73.3 bits (172), Expect = 2e-13
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Frame = +1
Query: 157 KSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDLRSIK 324
K++V S S+ LA +A + G T +ELL +G DD +++R D +
Sbjct: 31 KNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESASG 90
Query: 325 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNN 501
G + A V+ + +L + + + + + +F + + K IN WV + TN
Sbjct: 91 GPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNK 150
Query: 502 RIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 681
I +++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ VP M R
Sbjct: 151 LIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSRE 210
Query: 682 DYXYG 696
D G
Sbjct: 211 DQYIG 215
>01_01_1152 + 9170628-9171899
Length = 423
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Frame = +1
Query: 154 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKGV 330
G++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNT 117
Query: 331 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRI 507
A V+V G L FA + + + + DF+ A+ +N +V + T I
Sbjct: 118 SF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLI 175
Query: 508 KDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 687
+D++ P+S+ S+T VL NA++FKG WS F T F++ ++ P M +
Sbjct: 176 RDVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPF 235
Query: 688 XYGESAALNAQLIXIPY 738
+A + +PY
Sbjct: 236 ERHVAAFPGFTALKLPY 252
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 71.7 bits (168), Expect = 6e-13
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +1
Query: 196 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGK 375
LA LA +DGET +LL +G + A ++R+ +L A ++V +
Sbjct: 33 LALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFAAGIFVDRSLR 90
Query: 376 LDENFAVVSRDVFNSDVQNIDFSKNT-VAAKSINDWVEENTNNRIKDLVNPDSLSSATAG 552
L F + + +++DF AA +N ++ + TN R+ + ++P + S+T
Sbjct: 91 LRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTISPGTFGSSTKC 150
Query: 553 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
VL NA++FK W KF+ T R F+ + VP +
Sbjct: 151 VLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFL 189
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +1
Query: 445 KNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDR 624
K A +N WVE+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D
Sbjct: 209 KAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDG 268
Query: 625 DFYVSKDKTIKVPMM 669
+F++ K+++ P M
Sbjct: 269 EFHLLDGKSVQAPFM 283
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +1
Query: 469 INDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 648
+N WV+ T+ IK++ P S++ T VL NA+YFKGAW+ KFD T D +F++ +
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGE 528
Query: 649 TIKVPMMYKRGDYXYGESAALNAQLIXIPY 738
+++ P M R +L +++ +PY
Sbjct: 529 SVQAPFMSTRKKQYLSSYDSL--KVLKLPY 556
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 69.3 bits (162), Expect = 3e-12
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Frame = +1
Query: 145 NNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP--DD--DAIRTEFASKSRDL 312
+N ++VV S S+ LA +A + G T +EL+ +G DD +++R D
Sbjct: 27 DNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESVRRAVEVGLADE 86
Query: 313 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEE 489
G + A V+ HD E A+ + + + DF + ++ K IN WV +
Sbjct: 87 SESGGPRVSYACGVW-HD-----ERLAL--KPAYRA----ADFQRQPKSSRKKINKWVSK 134
Query: 490 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
TN I++++ S+ TA VLVNAIYFKG WS+ F T+ F+ ++ P M
Sbjct: 135 ATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFM 194
Query: 670 YKRGDYXYG 696
R D G
Sbjct: 195 SSREDQYIG 203
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 412 FNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAW 588
+ +DF + V A K IN WV T N I +++ P+S S T V+ NAIYFKG W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 589 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYXYGESAALNAQLIXIPY 738
+ FD+ T++R+F +++VP M + + + +++ +PY
Sbjct: 102 LAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPY 151
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 66.1 bits (154), Expect = 3e-11
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 460 AKSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVS 639
A +N WV+ T+ IK+++ P S+ T VL NA+YFKGAW+ KFD T D +F +
Sbjct: 6 ASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLL 65
Query: 640 KDKTIKVPMM 669
K++ P M
Sbjct: 66 DGKSVLAPFM 75
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 65.3 bits (152), Expect = 5e-11
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Frame = +1
Query: 160 SVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDD----AIRTEFASKS-----RDL 312
+ +SA +V LA A + G T ++L+A+G A AS+ RD
Sbjct: 33 NAAVSAPAVHVSLALAAGGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDR 92
Query: 313 RSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEE 489
+ G L A V+ L F ++ +V+ S + DF +K A IN WV++
Sbjct: 93 STSGGPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKD 152
Query: 490 NTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
+T + L+ ++ T VL +A+YF+G W + D R T+++ FY +++VP +
Sbjct: 153 STKGTVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFV 212
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/92 (35%), Positives = 46/92 (50%)
Frame = +1
Query: 463 KSINDWVEENTNNRIKDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 642
K IN+WV + TN I +++ S+ T VLVNAIYFKG WS F T+ F+
Sbjct: 88 KKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLD 147
Query: 643 DKTIKVPMMYKRGDYXYGESAALNAQLIXIPY 738
++ V M R D G N ++ +PY
Sbjct: 148 GSSVNVRFMRSREDQYIGFYDGFN--VLKLPY 177
>11_01_0771 + 6453130-6454488
Length = 452
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +1
Query: 376 LDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAGV 555
+D ++ + + V ++ K A K IN W T I D++ P S+ TA V
Sbjct: 146 IDAFILLLDPSMIDQCVLDLVSEKAEEARKQINAWARRATGKLITDVLPPRSVGPETAVV 205
Query: 556 LVNAIYFKGAWSSKFDERLTSDRDFY 633
L NAIYFKG W F+E T + FY
Sbjct: 206 LGNAIYFKGKWDRPFNESDTERKPFY 231
>05_06_0044 - 25150322-25151260
Length = 312
Score = 52.4 bits (120), Expect = 4e-07
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Frame = +1
Query: 352 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTNNRIKDL---- 516
V+V +L+ FA + VF + V++ + N AA++ IN+W T +KD+
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRS---AGNPAAARAEINEWFSSQTGGFVKDILSNS 59
Query: 517 VNPDSLSSATAG-------VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
++ D S G L N++YF W F LT + DF+VS D ++VP M
Sbjct: 60 IDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 348 VRHFKLNAFN*SKVTAFTREFCSYSIVVREADSFQKLFMGFTIRS 214
VRH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +1
Query: 265 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 390
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -3
Query: 335 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAER 168
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRR 264
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 283 TEFASKSRDLRSIKGVELKMANKVYVHDG 369
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 323 LIDRRSRLLLANSVRIASSSGK 258
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 166 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 309
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,325,719
Number of Sequences: 37544
Number of extensions: 365683
Number of successful extensions: 1046
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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