Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30419
         (739 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                     112   2e-25
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      90   2e-18
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      87   2e-17
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.0  
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)                       29   3.9  
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)                 29   5.2  
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   5.2  
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)         28   9.1  
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score =  112 bits (270), Expect = 2e-25
 Identities = 56/190 (29%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
 Frame = +1

Query: 172 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 351
           S  S++  LA   L + G T  ++ K   FP D   +     ++ +  +  G ++ MAN+
Sbjct: 33  SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92

Query: 352 VYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 528
           ++   G ++ E F   S++ F++++  +D+ KN+  A+ ++N WVE+ T ++IK+L+   
Sbjct: 93  LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152

Query: 529 SLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYXYGESAA 708
             +  T   LVNA+YFKG+W   F+   T    F  +  + I+V  MY+  ++ Y ES+ 
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESST 212

Query: 709 LNAQLIXIPY 738
           L  Q++ +PY
Sbjct: 213 LGCQIVELPY 222


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
 Frame = +1

Query: 196 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 363
           L  + L S G T  ++    G+ + +   T    K      L S  G  E+++ NK++ H
Sbjct: 5   LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64

Query: 364 DGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 540
           D  ++ E F   +R+ ++S++  +DF +K   A K +N WV + T   IK+L+    ++S
Sbjct: 65  DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124

Query: 541 ATAGVLVNAIYFKGAWSSKFDERLTSDRDFYV--SKDKTIKVPMMYKRGDYXYGESAALN 714
            T  ++VNA+YFKG W  +F E  T    F+V  S +  I+V MM ++    +   A + 
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRKMKVNFYYDADIK 184

Query: 715 AQLIXIPY 738
            +++ +PY
Sbjct: 185 CRVVELPY 192


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
 Frame = +1

Query: 331 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 507
           E+ +AN +++     + + F  + +  +++D+  +D+  +   A K +N WVEE T  +I
Sbjct: 49  EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108

Query: 508 KDLVNPDSLSSATAGVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 687
            DL+ P   +  T   LVNAIYFKG W   F +  +   +F  +    ++V MM+++  +
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168

Query: 688 XYGESAALNAQLIXIPY 738
            Y  S     +L+ +PY
Sbjct: 169 KYLHSDKYKCKLLELPY 185


>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2248

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
 Frame = +1

Query: 202  QLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLD 381
            Q+  +SD     + L  + F ++DA      SK    +    ++++   K+Y      +D
Sbjct: 703  QVTTSSDVNNALDELDEVQFSEEDARGIRGLSKDATFK----IKIEEKRKLYQISKAAVD 758

Query: 382  ENFAVVSRDVFNSDVQNIDFSKNTVA--AKSINDWVEENTNNRIKDLVNPDSLSSATAGV 555
             +      D F   ++  D S N+        +  +++N+N+ + D     +L    A V
Sbjct: 759  GDTGSKMADRFLEQLER-DPSANSDGRGTDEPSGHLDKNSNSEVSDETLEKTLK---ANV 814

Query: 556  LVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIK 657
              N    KG++S   D+   SD    +S DK++K
Sbjct: 815  QDNIKVTKGSFSDSSDKSSGSDNTDKMSSDKSVK 848


>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
          Length = 641

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 373 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 513
           K +E+  + S  +F+ + +N+DFS +     ++ DW   VE    N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507


>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
          Length = 595

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 58  AMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDG 225
           +MAAV   + +L+  +      + + ++KNN  +S+   AF+ L  L  L L+S+G
Sbjct: 36  SMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNG 91


>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 640

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 66  CHCRDGDSKQTNDCL 22
           CHCRDG+S Q N+ +
Sbjct: 336 CHCRDGESVQVNNAM 350


>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
          Length = 672

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 223 HQKLKLTEREEAAPKMPRGQRFSL 152
           HQ L + E + ++PK PR  +F L
Sbjct: 56  HQNLSINEMDSSSPKRPRQHQFGL 79


>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 345

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 223 HQKLKLTEREEAAPKMPRGQRFSL 152
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 223 HQKLKLTEREEAAPKMPRGQRFSL 152
           HQ L + E + ++PK PR  +F L
Sbjct: 50  HQNLSINEMDSSSPKRPRQHQFGL 73


>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 132

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 223 HQKLKLTEREEAAPKMPRGQRFSL 152
           HQ L + E + ++PK PR  +F L
Sbjct: 21  HQNLSINEMDSSSPKRPRQHQFGL 44


>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 223 HQKLKLTEREEAAPKMPRGQRFSL 152
           HQ L + E + ++PK PR  +F L
Sbjct: 7   HQNLSINEMDSSSPKCPRQHQFGL 30


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,254,974
Number of Sequences: 59808
Number of extensions: 427350
Number of successful extensions: 1320
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)