Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30418
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 75 7e-14
U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 64 1e-10
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 61 9e-10
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 60 1e-09
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 29 2.4
U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 29 4.3
U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 28 7.4
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 28 7.4
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 28 7.4
AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical ... 27 9.8
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 74.5 bits (175), Expect = 7e-14
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Frame = +2
Query: 128 NKFLDSFDHVLSDCDGVIWTQN-PLPRVGEFFK-QMKKRGKTVNFVSNNSIRSRANYEAQ 301
N+ L ++D L D DGV+WT + P+P E+ ++ K V ++NNS ++ Y +
Sbjct: 9 NELLANYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKK 68
Query: 302 FKAAGIDN-GFESLIIPSIAVAEYLKSAT---FNKTVYCVTCTETKRVLEAH-GFKC-KE 463
+ G + G ++I P+I +A+YLKS + VY + K LE G KC
Sbjct: 69 IEKLGFGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGT 128
Query: 464 GPD-LGPEYYGEYIQYLEDDEEIGAVVFDSDFRINLPKMYRAITYLKRPEVLFINGATDR 640
GPD + G++I ++ AVV D + PK+ +A YL+ P V ++ D
Sbjct: 129 GPDSIRDHTDGDFIHKVDMSIAPKAVVCSYDAHFSYPKIMKASNYLQDPSVEYLVTNQDY 188
Query: 641 SVP-MKPGLLALGTG 682
+ P PG++ G+G
Sbjct: 189 TFPGPVPGVVIPGSG 203
>U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical
protein C45E5.1 protein.
Length = 303
Score = 73.7 bits (173), Expect = 1e-13
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Frame = +2
Query: 128 NKFLDSFDHVLSDCDGVIWTQN-PLPRVGEFFKQ-MKKRGKTVNFVSNNSIRSRANYEAQ 301
++ L +FD + D DGV+WT + P+P E+ + K+V +NNS ++ Y +
Sbjct: 9 SQLLSNFDTFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTNNSTKTLEQYMKK 68
Query: 302 FKAAGIDN-GFESLIIPSIAVAEYLK--SATF-NKTVYCVTCTETKRVL-EAHGFKC-KE 463
K G E+L+ P+I + +Y K S F N+ +Y + K+ L E G KC
Sbjct: 69 VKKMRFGRLGRENLLSPTIVLCDYFKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGT 128
Query: 464 GPDLGPEYY-GEYIQYLEDDEEI-GAVVFDSDFRINLPKMYRAITYLKRPEVLFINGATD 637
GPD Y G++I ++ +I AVV D + PK+ +A +L P V F+ D
Sbjct: 129 GPDHKDNYTDGDFINEVDVKSKIPKAVVVSFDSHFSYPKLMKAANFLADPLVEFLVCNED 188
Query: 638 RSVP-MKPGLLALGTG 682
+ P PG++ TG
Sbjct: 189 STFPGPVPGMILPETG 204
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 63.7 bits (148), Expect = 1e-10
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Frame = +2
Query: 104 LDLSVEDFNKFLDSFDHVLSDCDGVIWT-QNPLPRVGEFFKQMKKRGKTVNFVSNNSIRS 280
L L + F+K + + D + D DGV+W ++ +P + K K + ++NN+ +S
Sbjct: 42 LPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKS 101
Query: 281 RANYEAQFKAAGIDNGF---ESLIIPSIAVAEYLKSATFN-KTVYCVTCTETKRVLEAHG 448
RA Y + G ++ +L+ P+ VA+ L A + K VY + + ++ G
Sbjct: 102 RAVYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELG 161
Query: 449 FKC-KEGPDLGPEYY---GEYIQYLEDDEEIGAVVFDSDFRINLPKMYRAITYLKRPEVL 616
+ GP+ + G ++ ++ +E +GAVV + + KM +A YL+ VL
Sbjct: 162 IEYFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGVL 221
Query: 617 FINGATDRSVP 649
F+ D + P
Sbjct: 222 FVATNEDETCP 232
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 60.9 bits (141), Expect = 9e-10
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Frame = +2
Query: 110 LSVEDFNKFLDSFDHVLSDCDGVIWT-QNPLPRVGEFFKQMKKRGKTVNFVSNNSIRSRA 286
L + F K + + D + D DGV+W ++ +P + K K + ++NN+ +SRA
Sbjct: 17 LCPDTFAKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRA 76
Query: 287 NYEAQFKAAGIDNGF---ESLIIPSIAVAEYLKSATFN-KTVYCVTCTETKRVLEAHGFK 454
Y + G ++ +L+ P+ VA+ L A + K VY + + ++ G +
Sbjct: 77 VYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIE 136
Query: 455 C-KEGPDLGPEYY---GEYIQYLEDDEEIGAVVFDSDFRINLPKMYRAITYLKRPEVLFI 622
GP+ + G ++ ++ +E +GAVV + + KM +A YL+ VLF+
Sbjct: 137 YFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASNYLREEGVLFV 196
Query: 623 NGATDRSVP 649
D + P
Sbjct: 197 ATNEDETCP 205
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 60.5 bits (140), Expect = 1e-09
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Frame = +2
Query: 110 LSVEDFNKFLDSFDHVLSDCDGVIWT-QNPLPRVGEFFKQMKKRGKTVNFVSNNSIRSRA 286
L + F K + + D + D DGV+W ++ +P + K K + ++NN+ +SRA
Sbjct: 34 LCPDTFAKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRA 93
Query: 287 NYEAQFKAAGIDNGF---ESLIIPSIAVAEYLKSATFN-KTVYCVTCTETKRVLEAHGFK 454
Y + G ++ +L+ P+ VA+ L A + K VY + + ++ G +
Sbjct: 94 VYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIE 153
Query: 455 C-KEGPDLGPEYY---GEYIQYLEDDEEIGAVVFDSDFRINLPKMYRAITYLKRPEVLFI 622
GP+ + G ++ ++ +E +GAVV + + KM +A YL+ VLF+
Sbjct: 154 YFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYIKMMKASNYLREEGVLFV 213
Query: 623 NGATDRSVP 649
D + P
Sbjct: 214 ATNEDETCP 222
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 467 PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFRI 562
P LGP+Y G ++E ++ +++D+D R+
Sbjct: 485 PSLGPKYNGCVFAWIEQEQSYWQMMYDNDIRM 516
>U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical
protein F08F3.8 protein.
Length = 380
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 317 IDNGFESLIIPSIAVAEYLK 376
IDNGFE +++P + A Y K
Sbjct: 51 IDNGFEQILVPKVCAANYDK 70
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = +2
Query: 65 C*INIMGTESKHLLDLSVEDFNKFLDSFDHVLSDCDGVIWTQNPLPRVGEFFKQMKKRGK 244
C +MG ++ L V + + FL + D LSD V +T +P + G
Sbjct: 83 CTEKLMGYAARTLKSSYVTNLDFFLRNLDTALSDL--VFFTNTLIPL--SIVAEATVFGS 138
Query: 245 TVNFVSNNSIRSRANYEAQFKAAGIDNGFESLIIPSI 355
+V FV+ ++I ++ Y K + S ++P I
Sbjct: 139 SVKFVTRDNIGAKIMYLKYIKEHNQMHLLHSFLVPQI 175
>U51993-4|AAB36854.2| 540|Caenorhabditis elegans Hypothetical
protein F56F10.1 protein.
Length = 540
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 461 EGPDLGPEYYGEYIQYLEDDEEIGAVVFDSDFR 559
EGP+ G +QYL+ +E GA VFD + R
Sbjct: 98 EGPENGKWAANPNVQYLQWAKEFGADVFDLEHR 130
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.4
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +2
Query: 71 INIMGTESKHLLDLSVEDFNKFLDSFDHVLSDCDGVIWTQNPLPR--VGEFFKQMKKRGK 244
INI T SK DLSV N D V C + QN P+ G+ F+Q ++ +
Sbjct: 495 INISSTSSKEQPDLSVSLPNVLSDDLQMV---CKEIEIEQNDPPKSVSGDNFQQ-RRSSR 550
Query: 245 TVNFVSNNSIRSRANYEAQFKAAGIDNGFESLII 346
+ VS +S R + + G+ + F + I
Sbjct: 551 DYDNVSEDSYRLSDHERSTRSEVGVGSKFAAATI 584
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 383 TFNKTVYCVTCTETKRVLEAHGFKCKE 463
TFN +Y C ET+R+L +G + E
Sbjct: 11 TFNVLIYLAACQETERILANNGTEDNE 37
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 383 TFNKTVYCVTCTETKRVLEAHGFKCKE 463
TFN +Y C ET+R+L +G + E
Sbjct: 11 TFNVLIYLAACQETERILANNGTEDNE 37
>AC006774-8|AAY43992.1| 295|Caenorhabditis elegans Hypothetical
protein Y46H3A.7 protein.
Length = 295
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 467 PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFRINL 568
P +G Y+ Q L+D EI + FDS +NL
Sbjct: 100 PSVGGAYFSSVNQPLQDQAEIRKIGFDSAEDVNL 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,819,462
Number of Sequences: 27780
Number of extensions: 298809
Number of successful extensions: 857
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -