Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30418
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    25   0.92 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.6  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 397 CLLCNLY*DQKSLRSSRIQMQGR 465
           CLLC    DQK+L  S ++  G+
Sbjct: 64  CLLCQKAFDQKNLYQSHLRSHGK 86


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 506 TEYIRHSTLALDLDLPCI*IRELLRLFWSQY 414
           T Y   S    DL L  + +   L LFW QY
Sbjct: 75  TNYYLFSLAISDLILLVLGLPNELSLFWQQY 105


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +2

Query: 557 RINLPKMYRAITYLKRPEVLFINGATD 637
           RIN  K+ R     KRP   F   ATD
Sbjct: 146 RINFTKLKRHHPRYKRPRTTFEPRATD 172


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 128 NKFLDSFDHVLSDCDGVIWTQNPLPR 205
           NKF ++F  +L +C G   +Q   PR
Sbjct: 353 NKFREAFKLMLPNCCGKWSSQKSEPR 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,432
Number of Sequences: 438
Number of extensions: 3315
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)