Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30417
(675 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MR49 Cluster: GH21728p; n=7; Endopterygota|Rep: GH217... 75 1e-12
UniRef50_Q9BW98 Cluster: EIF3S8 protein; n=11; Coelomata|Rep: EI... 68 2e-10
UniRef50_Q99613 Cluster: Eukaryotic translation initiation facto... 68 2e-10
UniRef50_O02328 Cluster: Probable eukaryotic translation initiat... 58 3e-07
UniRef50_Q5C2D5 Cluster: SJCHGC02270 protein; n=1; Schistosoma j... 54 2e-06
UniRef50_A2X0B4 Cluster: Putative uncharacterized protein; n=2; ... 53 7e-06
UniRef50_O49160 Cluster: Eukaryotic translation initiation facto... 46 6e-04
UniRef50_UPI0000F30700 Cluster: UPI0000F30700 related cluster; n... 46 0.001
UniRef50_Q4N1J6 Cluster: Eukaryotic translation initiation facto... 43 0.006
UniRef50_Q9LIL2 Cluster: Eukaryotic translation initiation facto... 42 0.010
UniRef50_Q4P0P0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.055
UniRef50_Q5KH72 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_Q236V1 Cluster: FHA domain containing protein; n=1; Tet... 35 2.1
UniRef50_Q54X97 Cluster: Putative uncharacterized protein; n=1; ... 34 3.6
>UniRef50_Q8MR49 Cluster: GH21728p; n=7; Endopterygota|Rep: GH21728p
- Drosophila melanogaster (Fruit fly)
Length = 910
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/52 (67%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSFF 521
L+ASLDDPSE +HRSEP+R+QALA+Q DKV NLVD NE++F+ KQG+FF
Sbjct: 797 LMASLDDPSETVGMHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFF 848
>UniRef50_Q9BW98 Cluster: EIF3S8 protein; n=11; Coelomata|Rep:
EIF3S8 protein - Homo sapiens (Human)
Length = 325
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 243 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 293
>UniRef50_Q99613 Cluster: Eukaryotic translation initiation factor 3
subunit 8; n=46; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 8 - Homo sapiens (Human)
Length = 913
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>UniRef50_O02328 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 8; n=2; Caenorhabditis|Rep: Probable
eukaryotic translation initiation factor 3 subunit 8 -
Caenorhabditis elegans
Length = 898
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE 539
L A+LD+P++C I+HR EP+R+Q LAL L+DK+ L ++NE+I E
Sbjct: 788 LSATLDEPTDCLIMHRVEPSRLQMLALNLSDKLQTLAENNEQILE 832
>UniRef50_Q5C2D5 Cluster: SJCHGC02270 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02270 protein - Schistosoma
japonicum (Blood fluke)
Length = 186
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/47 (48%), Positives = 38/47 (80%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFEKQ 533
L ASL+ PS+ I+H++E +R+QALALQL+DKV ++V+ N+++ E +
Sbjct: 111 LAASLEVPSDALIMHKTERSRLQALALQLSDKVNSIVEMNDKLVESR 157
>UniRef50_A2X0B4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 738
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSFF 521
L AS D P++C I H + TR+Q L Q+ADK+ LV+SNER +E K G F
Sbjct: 591 LHASWDQPTKCIIFHNVDQTRLQGLLFQMADKLSVLVESNERAYEAKTGGTF 642
>UniRef50_O49160 Cluster: Eukaryotic translation initiation factor 3
subunit 8; n=12; Magnoliophyta|Rep: Eukaryotic
translation initiation factor 3 subunit 8 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 900
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFEKQ 533
L AS D P+ C + H + +R+Q+LA QL +K+ L +SNER E +
Sbjct: 758 LHASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSILAESNERAMESR 804
>UniRef50_UPI0000F30700 Cluster: UPI0000F30700 related cluster; n=1;
Bos taurus|Rep: UPI0000F30700 UniRef100 entry - Bos
Taurus
Length = 242
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/49 (51%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQG 530
L+AS PS+ ++H +EPT Q LALQLA+ +G+LV+ N+R+F+ KQG
Sbjct: 196 LMASWQ-PSQPVVMHCTEPTAQQNLALQLAENLGSLVE-NKRVFDHKQG 242
>UniRef50_Q4N1J6 Cluster: Eukaryotic translation initiation factor 3
subunit 8, putative; n=2; Theileria|Rep: Eukaryotic
translation initiation factor 3 subunit 8, putative -
Theileria parva
Length = 951
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFEKQGSFF 521
+L S D S+C +++ SEPT +Q LA++LA+ + V+ NE + S F
Sbjct: 849 ILGSWDYSSKCCLINHSEPTELQKLAVKLAENLSTAVEQNELTLNMKNSKF 899
>UniRef50_Q9LIL2 Cluster: Eukaryotic translation initiation factor 3
subunit 8-like protein; n=1; Arabidopsis thaliana|Rep:
Eukaryotic translation initiation factor 3 subunit
8-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 800
Score = 42.3 bits (95), Expect = 0.010
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFEKQ 533
L A+ D P++C + H + R Q+LA Q+ +K+ L +SNE E +
Sbjct: 712 LNATWDQPTQCIVFHEVQHNRAQSLAFQITEKLATLAESNESAMESK 758
>UniRef50_Q4P0P0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 895
Score = 39.9 bits (89), Expect = 0.055
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE 539
L ASLD + HR E T++Q LA LA+K ++++ NER+ +
Sbjct: 794 LAASLDPSANVVSFHRLELTKVQQLAATLAEKANSMLEQNERLLD 838
>UniRef50_Q5KH72 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 885
Score = 37.5 bits (83), Expect = 0.29
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE 539
L ASLD I HR E + +Q LA QLA++ ++++ NE+ +
Sbjct: 779 LAASLDQIDGVVIFHRVEQSEVQRLAQQLAERTASMLEQNEKTLD 823
>UniRef50_Q236V1 Cluster: FHA domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: FHA domain containing
protein - Tetrahymena thermophila SB210
Length = 442
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 221 AYKIGLTFTLSKTLKNSH*AHCKHCSYKINCVKLVSIIN 105
AY+IG F K LK HCS K+NC+K + I+N
Sbjct: 293 AYQIGKNF--QKQLKEDELIENLHCSIKMNCIKQILILN 329
>UniRef50_Q54X97 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 936
Score = 33.9 bits (74), Expect = 3.6
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = -3
Query: 667 ASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE 539
AS++ +E +I R+E T++Q LAL ++ + + V+ NERI++
Sbjct: 798 ASMEHSTE-SITFRAEQTKLQYLALHYSESLVDFVEQNERIYD 839
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,250,048
Number of Sequences: 1657284
Number of extensions: 9182647
Number of successful extensions: 22754
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22749
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -