Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30417
(675 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein. 68 4e-11
U46025-1|AAD03462.1| 913|Homo sapiens translation intiation fac... 68 4e-11
BT007335-1|AAP35999.1| 325|Homo sapiens eukaryotic translation ... 68 4e-11
BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation ... 68 4e-11
BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation ... 68 4e-11
BC000533-1|AAH00533.1| 325|Homo sapiens EIF3S8 protein protein. 68 4e-11
AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing... 68 4e-11
AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens ... 68 4e-11
AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation ... 68 4e-11
>U91326-1|AAC27674.1| 913|Homo sapiens eIF-3 p110 subunit protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>U46025-1|AAD03462.1| 913|Homo sapiens translation intiation factor
eIF-3 p110 subunit protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>BT007335-1|AAP35999.1| 325|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 325
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 243 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 293
>BC071705-1|AAH71705.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit C protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>BC001571-1|AAH01571.1| 913|Homo sapiens eukaryotic translation
initiation factor 3, subunit 8, 110kDa protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>BC000533-1|AAH00533.1| 325|Homo sapiens EIF3S8 protein protein.
Length = 325
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 243 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 293
>AY762099-1|AAX07826.1| 913|Homo sapiens cell migration-inducing
protein 17 protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>AK000739-1|BAA91352.1| 913|Homo sapiens protein ( Homo sapiens
cDNA FLJ20732 fis, clone HEP08682. ).
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
>AC002544-1|AAC27426.1| 913|Homo sapiens Translation initiation
factor eIF-p110 protein.
Length = 913
Score = 67.7 bits (158), Expect = 4e-11
Identities = 29/51 (56%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Frame = -3
Query: 673 LLASLDDPSECAILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSF 524
L+ASLD P++ ++HR+EPT Q LALQLA+K+G+LV++NER+F+ KQG++
Sbjct: 831 LMASLDQPTQTVVMHRTEPTAQQNLALQLAEKLGSLVENNERVFDHKQGTY 881
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,130,070
Number of Sequences: 237096
Number of extensions: 1420738
Number of successful extensions: 2405
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -