Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30415
         (755 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g21990.1 68415.m02612 expressed protein contains Pfam profile...    29   3.3  
At3g30560.1 68416.m03867 hypothetical protein                          29   4.4  
At5g23940.1 68418.m02811 transferase family protein similar to a...    28   5.8  

>At2g21990.1 68415.m02612 expressed protein contains Pfam profile
           PF04759: Protein of unknown function, DUF617
          Length = 252

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 403 LPALPGAMLRSKHKTGSSGDNL*G 474
           +P LPG  L  +H++GSSG  + G
Sbjct: 72  IPVLPGGSLPDQHRSGSSGSRVTG 95


>At3g30560.1 68416.m03867 hypothetical protein
          Length = 1473

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 215 REFANTISNKSNASQNLKSAIFEGPCFGSLVTHSPEYGRW 96
           +EFA   SNK + S        +G     ++  SPEY  W
Sbjct: 109 KEFAAAASNKEHGSSTTSRCCMQGQIVLPMLKESPEYMWW 148


>At5g23940.1 68418.m02811 transferase family protein similar to
           anthranilate N-hydroxycinnamoyl/benzoyltransferase,
           Dianthus caryophyllus [gi:2239091]; contains Pfam
           transferase family domain PF002458
          Length = 484

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 170 NLKSAIFEGPCFGSLVTHSPEYG 102
           NL  AIF G   G L  H PE+G
Sbjct: 318 NLIQAIFTGTAAGLLAAHGPEFG 340


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,989,239
Number of Sequences: 28952
Number of extensions: 292722
Number of successful extensions: 612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)