Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30413
(747 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 52 7e-07
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 51 9e-07
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 46 4e-05
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 45 8e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.005
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 38 0.007
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.081
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.11
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.11
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.14
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 33 0.33
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 33 0.33
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 1.3
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 30 1.7
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 1.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11) 29 5.3
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 9.2
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 51.6 bits (118), Expect = 7e-07
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 13/209 (6%)
Frame = +3
Query: 123 EVFLPILNQWFQQCAGIVLTNYHYLSTATCF--HGEFYDPAYRRIIAGSSRRSE------ 278
E+ L N C G ++ Y L+++ CF + R+ RR E
Sbjct: 2 EIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIEGYEEII 61
Query: 279 PGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDL 458
G+ Y+H + + D DV+++++ F +
Sbjct: 62 QGDQLYIHPGLVVGDLISPG-DYDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFV 120
Query: 459 LGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDN 638
GWG T +G S L++LE+ + +KE C ++ + D FCAG + GGRD
Sbjct: 121 TGWGKTAEGSPYSP-VLNELEVDIVSKEVCNAN-DSYNGTINDRYFCAGFPQ-GGRDSCG 177
Query: 639 TDLGAPAFFQNA-----LVGIVSFGKSNA 710
D G P NA L G+VS+G+ A
Sbjct: 178 GDSGGPLVCSNADGQYVLRGVVSWGEGCA 206
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Frame = +3
Query: 297 VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTT 476
V + HPE+ + D++++ ++ + F + GWG+T
Sbjct: 154 VSHVIEHPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGST 213
Query: 477 VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAP 656
+ G+ S L + L + + +C+ +Y G V + CAG R+G N D G P
Sbjct: 214 IGTGN-SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGP 269
Query: 657 AFFQN----ALVGIVSFGKSNANDIYPVVLTSIS 746
++ L G VS+GK + Y V ++
Sbjct: 270 LVCEDNGRWYLHGAVSYGKLHCPTTYYTVFARVA 303
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
Frame = +3
Query: 138 ILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFAV-- 311
I N Q C G ++T ++ A C + +PA ++ G+ R+ P + ++
Sbjct: 649 IYNSGRQFCGGTLVTPEWVITAAHCVVDK--NPASIQVRLGAQDRTSPDPSVEMRISIRS 706
Query: 312 --NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQ 482
NHP++ S + D++++R++ + GWGT
Sbjct: 707 IHNHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSS 766
Query: 483 GGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAF 662
GGS + L++ + + + C Y G ++ + CAG GG D D G P
Sbjct: 767 GGSQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE-GGVDTCQGDSGGPLV 821
Query: 663 FQNA----LVGIVSFG 698
Q+ L G+ S+G
Sbjct: 822 CQHGNQWFLTGVTSWG 837
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Frame = +3
Query: 315 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXX---DLLGWGTTVQG 485
HP +S ++YD D++++R+ + F + GWG
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 486 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 665
LH+ + + + + CR+ + D +VT N FCAG + D D G P
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
Query: 666 QNAL 677
N L
Sbjct: 317 DNPL 320
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +3
Query: 462 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 641
GWG +G + L + ++ + +++ C Q DR +T+N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 642 DLGAPAFFQN-------ALVGIVSFGKSNA 710
D G P N LVG+ S+GK A
Sbjct: 409 DSGGPFVCTNPENPRQWTLVGVTSWGKGCA 438
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 41.5 bits (93), Expect = 7e-04
Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 12/210 (5%)
Frame = +3
Query: 153 FQQCAGIVLTNYHYLSTATCFH-----GEFYDPAYRRIIAGSSRRSEPGEISY---VHFA 308
F C G ++++ ++ A H G +P ++ G+ ++ + +
Sbjct: 452 FHTCGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGAHKKRGSTSVQQSLRLSQI 511
Query: 309 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 488
+ HP++++ D++++ + + F + GWG
Sbjct: 512 IEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDT 571
Query: 489 SVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 668
S L + L + + ENCR +Y V + CAG R+ N D G P +
Sbjct: 572 QQSPDILQQAMLPIASHENCRRKY---GDVSSTAHLCAGEARSDAAGGCNGDSGGPLVCE 628
Query: 669 N----ALVGIVSFGKSNANDIYPVVLTSIS 746
+ L G VS+G N + V ++
Sbjct: 629 DNGSWFLHGAVSYGLRNCPTTHYTVFARVA 658
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 153 FQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA--VNHPEF 326
F C G ++++ ++ A C H Y ++ +R + + + HP++
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIHRNKNPGGYTVVVGAHKKRGSTSVQQSLRLSQIIEHPKY 188
Query: 327 SEENYDKDVSIVRVTHAIHF 386
++ D++++ + + F
Sbjct: 189 NDRRIVNDIALLELATPVQF 208
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 7/186 (3%)
Frame = +3
Query: 162 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG--EISYVHFAVNHPEFS-E 332
C G V+ ++ A CF Y + + G + V + HP+++
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSKDAKDYTIAVGEHDLNATDGYEQRPDVERIILHPKYAPH 194
Query: 333 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLH 512
N+D DV+++++ + + + GWG + G LH
Sbjct: 195 NNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGH-GPWVLH 253
Query: 513 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LV 680
+ + + +++ C++ Y V+ CAG AGG D D G P + L+
Sbjct: 254 QAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQGDSGGPLVCKEGDVWYLM 312
Query: 681 GIVSFG 698
G +S+G
Sbjct: 313 GAISWG 318
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 39.9 bits (89), Expect = 0.002
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 7/186 (3%)
Frame = +3
Query: 162 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPG---EISYVHFAVNHPEFSE 332
C G V++ + L+ A C E + ++ G R ++ V ++H +S
Sbjct: 574 CGGNVISPWWVLTAAHCVQDE--RASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYSY 631
Query: 333 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLH 512
D D +++++T ++F + GWG+T GS S L
Sbjct: 632 NTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGSPSPNYLQ 689
Query: 513 KLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LV 680
++ L + N C Y R +T CAG + + D G P + L+
Sbjct: 690 EVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCERGGRWFLM 748
Query: 681 GIVSFG 698
G+ S+G
Sbjct: 749 GLSSWG 754
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Frame = +3
Query: 312 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXD--LLGWGTTVQG 485
+HP FS YD D++++R+ + +LGWG T
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN- 1307
Query: 486 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 665
L + + V N C++ Y+ VT N CAG + RD N D G F
Sbjct: 1308 -KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVF 1365
Query: 666 QNA 674
++
Sbjct: 1366 YDS 1368
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 38.7 bits (86), Expect = 0.005
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Frame = +3
Query: 309 VNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 488
++H +S D D +++++T ++F + GWG+T G
Sbjct: 375 ISHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRG 432
Query: 489 SVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 668
S S L ++ L + N C Y R +T CAG + + D G P +
Sbjct: 433 SPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCE 491
Query: 669 NA----LVGIVSFG 698
L+G+ S+G
Sbjct: 492 RGGRWFLMGLSSWG 505
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 38.3 bits (85), Expect = 0.007
Identities = 37/174 (21%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
Frame = +3
Query: 237 AYRRIIAGSSRRSEPGEISYVHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXX 416
A+RR+ SS +E ++ V H FS Y D++++++
Sbjct: 2 AHRRL---SSNTAE--QVIKVKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLP 56
Query: 417 XXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKF 596
L GWG V L + + + + E+C+ +Y + +
Sbjct: 57 SPGDVPPVGSKCWLTGWGRQVDSSGPLPDILQQARIPIASHEDCKRKY--GSGIYSYTHL 114
Query: 597 CAGLVRAGGRDYDNTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSIS 746
CAG + D G P + L G+VSFG N V T +S
Sbjct: 115 CAGEAKPNAAGACQGDSGGPLVCERNGQWTLYGVVSFGAGNCEVTSYTVYTKVS 168
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 34.7 bits (76), Expect = 0.081
Identities = 28/154 (18%), Positives = 60/154 (38%), Gaps = 5/154 (3%)
Frame = +3
Query: 162 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSEPGEISYVHFA---VNHPEFSE 332
C G +++ ++ A C G + P+Y +++ G R+ P H + HP ++
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSY-KVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 333 ENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLH 512
D++++ ++ + + GWG G S L
Sbjct: 152 PQLSNDIALIELSSPVPLSDRGHQVSVGSKCF---------ITGWGKIRHPGG-SHHILQ 201
Query: 513 KLELIVTNKENCRE--QYKGHDRVVTDNKFCAGL 608
+ + +++ C++ Q G +TD+ CAG+
Sbjct: 202 QAMMPPLSQDACKKKVQQAGFGIQITDSMVCAGV 235
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 456 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 635
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 636 NTDLGAP 656
D G P
Sbjct: 133 QGDSGGP 139
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +3
Query: 456 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 635
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 636 NTDLGAP 656
D G P
Sbjct: 477 QGDSGGP 483
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 13/94 (13%)
Frame = +3
Query: 456 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VTDNKFCAGLV 611
+ GWG + G ++ L + +L V + C E++ G + VT+ CAG
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216
Query: 612 RAGGRDYDNTDLGAPAFFQN-----ALVGIVSFG 698
G++ N D G P +N L G+VS+G
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWG 250
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 32.7 bits (71), Expect = 0.33
Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 2/161 (1%)
Frame = +3
Query: 162 CAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSSRRSE-PGEISY-VHFAVNHPEFSEE 335
C G ++ ++ A C Y ++ R P + ++ + H +FS
Sbjct: 57 CGGSLIAKDWVVTAAHCVDRNPTPSGYTVVVGAHHRTGNTPVQNTFRLKQLFKHEQFSMR 116
Query: 336 NYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSVSDGNLHK 515
+ D++++++ + + GWG TV GGS + G L +
Sbjct: 117 HLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSAA-GILQQ 175
Query: 516 LELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDN 638
L V +C+ V + + CAG GG D+
Sbjct: 176 AMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDS 216
>SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23)
Length = 275
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 317 MVNSK-VNIRYFTGLTATGRSSDNATVCRIVEFSMETGSS*KVVVVGENNTSALLE 153
M+NS+ +N FTG TGR AT +V+ +E GS ++V+ + + +E
Sbjct: 215 MINSRGINALTFTGSLETGRKVAAATAVNLVKCQLEMGSKNALIVLDDADLDNAVE 270
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 123 EVFLPILNQW--FQQCAGIVLTNYHYLSTATCFH-GEFYDPAYRRIIAGSSRRSEPGEIS 293
E F+ + W QC+G ++ H ++ A C H G+++ I+ G S S E+
Sbjct: 138 EPFVSSVKLWSDVMQCSGTLIGPCHVITAAHCIHNGKWFVSPLTAILVGVSNTSSTDELD 197
Query: 294 YVHFAV 311
Y FAV
Sbjct: 198 Y--FAV 201
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 31.9 bits (69), Expect = 0.57
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 495 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 674
+ G L + L + CR+QY+ DR CAG R G N D G P + +
Sbjct: 632 TQGTLQQAMLPIAEHSLCRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQS 687
Query: 675 ----LVGIVSFGKSNANDIYPVVLTSIS 746
L G VS+G Y V T +S
Sbjct: 688 GVWVLHGAVSYGARWCPTDYYTVFTRVS 715
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 31.1 bits (67), Expect = 0.99
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 123 EVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFYDPAYRRIIAGSS---RRSEPGEIS 293
+V L + Q+C G ++ L+ A CF F P + G S RR G+
Sbjct: 1253 QVALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSL 1311
Query: 294 YVHFAVNHPEFSEENYDKDVSIVRVTHAIHF 386
+ HP+++ +++ D++++++ F
Sbjct: 1312 SIKAIFVHPQYNSSSHEHDLAVLQLQQPAEF 1342
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -1
Query: 660 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 571
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 681 LLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 553
L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 162 LICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 456 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGG 623
++GWG TV GG ++ L + L V +C ++ RV + CAG RA G
Sbjct: 92 VVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAG 146
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 28.7 bits (61), Expect = 5.3
Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 9/153 (5%)
Frame = +3
Query: 267 RRSEPGEISY-VHFAVNHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXX 443
RR + E + V + HP + + D DV+++R++H
Sbjct: 1394 RRGDGTEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVG 1453
Query: 444 XXXDLLGWGTT---VQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVR 614
+ GWG T G SV L + + + +++ C + VVT C G
Sbjct: 1454 KNCYITGWGRTGYNRPGASV----LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGA 1508
Query: 615 AGGRDYDNTDLGAPAFFQNA-----LVGIVSFG 698
D G P Q + + G+VS+G
Sbjct: 1509 GSTISGCFGDSGGPFVCQGSNKRWNIQGVVSWG 1541
>SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11)
Length = 204
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 492 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDY----DNTDLGAPA 659
++D H + +N E + Y + V + G +GG + + DLG
Sbjct: 78 IADSRFHSVVATWSNSEGEFQFYVDNSLVTKEKNLATGRTISGGGVFIIGNEQDDLGGGF 137
Query: 660 FFQNALVGIVS 692
F NALVG ++
Sbjct: 138 SFGNALVGTIT 148
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +1
Query: 103 TPAWSKLKYSYPS*INGSNSALVLFSPTTTTFQLLPVSMENSTILHTVALSLDLPVAVSP 282
TP S S PS S SP+T+ Q++P + + L T + S +LPV
Sbjct: 118 TPPISSSLSSLPSERQQSQDPSRGDSPSTSVKQMVPNTQASRLCLQTTSASSNLPVTTQQ 177
Query: 283 VKYLMFTLLLTIPNSL 330
+ FT IP +
Sbjct: 178 SFRMTFTPPSMIPKPI 193
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 726 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICY 586
R CH F+++ LLA F R+ HP + R H P R++C+
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCH 294
>SB_48258| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 473
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 108 SLVQIEVFLPILNQWFQQCAGIVLTNYHYLSTATCFHGEFY 230
+LV +E + P N+W ++ +LT Y STA G+ Y
Sbjct: 111 NLVSMERYDPSTNEWEEEAVAPMLTARKYFSTAV-LDGKLY 150
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -2
Query: 512 VEVAVRYTAALNGSSPSEQI-NKNTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILVVI 336
+++ V Y AA+ S Q N+N L Y + D + A + M SY+ + +
Sbjct: 303 MKIKVNYVAAVQDESTYSQFYNENNLKYEEEFTDVLENIKTRARIVIMVTSYNMAVEGMH 362
Query: 335 LLREFGMVNSK 303
L + G++N +
Sbjct: 363 LAKNRGLINGE 373
>SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 9.2
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = -2
Query: 569 MTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVW 390
M +VLF A+F + EF ++ + + T + +GS + +N Y D +D T+L
Sbjct: 1 MAVVLF-ALFRL--LEFLMLVIFTKGTCSNSGSQQALHVNITCEKYLDVYVDGETMLTGV 57
Query: 389 AEVDGMCYSYDAHILVV 339
V + +H++ V
Sbjct: 58 QGVHSILIDSSSHVMAV 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,846,819
Number of Sequences: 59808
Number of extensions: 630573
Number of successful extensions: 1520
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1518
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -