Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30412
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p pro...    57   3e-08
AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA ...    57   3e-08

>AY094806-1|AAM11159.1|  325|Drosophila melanogaster LD27256p
           protein.
          Length = 325

 Score = 56.8 bits (131), Expect = 3e-08
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
 Frame = +2

Query: 161 YFQALRIWIQQAQLYQN-LTCFPYYMVTFQGLQNHPTNVPLLNNN---------YXXXXX 310
           YF++L  W +QA L QN +  FPYY++      N+PT  P L ++               
Sbjct: 21  YFESLAEWAKQATLAQNAMLMFPYYLMA-----NYPTMFPGLPSSAALQAAAMGQPQALV 75

Query: 311 XXXXXVPNAPRIVPEA-AQQVASL------TPAEVIARHGGYEYIIPPLHKRLIAEFIDX 469
                 P  P   P   A   + L         ++I R GGYEY++ P  KR +AE ID 
Sbjct: 76  QGSAAAPGEPAAEPRLPAPNFSGLRILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDM 135

Query: 470 XXXXXXXXXXXXXAVDTLEI-----IDTEKFDFQK-FSEYYDDYKSAIEFTSGILFLEIV 631
                         V+   I     +     D +  FS ++D     I  ++ +L +E++
Sbjct: 136 FILFIVKIIITFGVVNLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEML 195

Query: 632 YRLLVCLFEAICLCGNVGQIGGATPG 709
            + +VC +EA+          GATPG
Sbjct: 196 TKFIVCCYEALW----TYLYQGATPG 217


>AE013599-746|AAF59020.1|  325|Drosophila melanogaster CG8237-PA
           protein.
          Length = 325

 Score = 56.8 bits (131), Expect = 3e-08
 Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
 Frame = +2

Query: 161 YFQALRIWIQQAQLYQN-LTCFPYYMVTFQGLQNHPTNVPLLNNN---------YXXXXX 310
           YF++L  W +QA L QN +  FPYY++      N+PT  P L ++               
Sbjct: 21  YFESLAEWAKQATLAQNAMLMFPYYLMA-----NYPTMFPGLPSSAALQAAAMGQPQALV 75

Query: 311 XXXXXVPNAPRIVPEA-AQQVASL------TPAEVIARHGGYEYIIPPLHKRLIAEFIDX 469
                 P  P   P   A   + L         ++I R GGYEY++ P  KR +AE ID 
Sbjct: 76  QGSAAAPGEPAAEPRLPAPNFSGLRILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDM 135

Query: 470 XXXXXXXXXXXXXAVDTLEI-----IDTEKFDFQK-FSEYYDDYKSAIEFTSGILFLEIV 631
                         V+   I     +     D +  FS ++D     I  ++ +L +E++
Sbjct: 136 FILFIVKIIITFGVVNLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEML 195

Query: 632 YRLLVCLFEAICLCGNVGQIGGATPG 709
            + +VC +EA+          GATPG
Sbjct: 196 TKFIVCCYEALW----TYLYQGATPG 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,406,151
Number of Sequences: 53049
Number of extensions: 549303
Number of successful extensions: 1214
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)