Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30412
         (709 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g30580.1 68417.m04339 phospholipid/glycerol acyltransferase f...    29   4.0  
At5g38940.1 68418.m04709 germin-like protein, putative similar t...    27   9.2  

>At4g30580.1 68417.m04339 phospholipid/glycerol acyltransferase
           family protein
          Length = 356

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = +2

Query: 194 AQLYQNLTCFPYYMVTFQGLQNHPTN 271
           A+L+ +++ +P+Y +  +GL+N P++
Sbjct: 167 AKLWASISIYPFYKINIEGLENLPSS 192


>At5g38940.1 68418.m04709 germin-like protein, putative similar to
           germin-like portein GLP9 [SP|Q9LEA7]; contains PS00725
           Germin family signature
          Length = 221

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/67 (25%), Positives = 34/67 (50%)
 Frame = -3

Query: 260 GSVNLGM*PCNKGNTLNSDIIVLVGSIFVVPENMLHVLRMLSQLNSVPHLSLVARNYQLV 81
           G++ +G    N  N L S ++   G +FV PE ++H    + +  +V   +L ++N  ++
Sbjct: 125 GTLLVGFVTSNPDNRLFSKVLN-EGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVI 183

Query: 80  FPFLTLF 60
               T+F
Sbjct: 184 TIANTVF 190


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,749,293
Number of Sequences: 28952
Number of extensions: 259974
Number of successful extensions: 528
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)