Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30410
         (699 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7N9Z5 Cluster: Transposase; n=70; Proteobacteria|Rep: ...    34   3.9  
UniRef50_A0Q802 Cluster: Putative uncharacterized protein; n=16;...    34   3.9  

>UniRef50_A7N9Z5 Cluster: Transposase; n=70; Proteobacteria|Rep:
           Transposase - Francisella tularensis subsp. holarctica
           FTA
          Length = 389

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 646 LNQHSTLFAIVNKP*LLNKYFTIYFQIKDLDSI--FY*GFQ 530
           L Q+  LF++++K  LL++Y  IYF+ +D  +I  FY  FQ
Sbjct: 317 LEQNKNLFSLISKITLLDRYANIYFETEDTKNIENFYVKFQ 357


>UniRef50_A0Q802 Cluster: Putative uncharacterized protein; n=16;
           Francisella tularensis|Rep: Putative uncharacterized
           protein - Francisella tularensis subsp. novicida (strain
           U112)
          Length = 345

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 646 LNQHSTLFAIVNKP*LLNKYFTIYFQIKDLDSI--FY*GFQ 530
           L Q+  LF++++K  LL++Y  IYF+ +D  +I  FY  FQ
Sbjct: 273 LEQNKNLFSLISKITLLDRYANIYFETEDTKNIENFYVKFQ 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,996,152
Number of Sequences: 1657284
Number of extensions: 11316366
Number of successful extensions: 16576
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16574
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)