Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30410
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.26 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.3  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -1

Query: 561 IWIQYFIKDFSFRX*VFYVLCI*KISIVN*YIVLSLLRKVT 439
           +W+ Y+++D + +     +LC  KI +   Y  LS+L  VT
Sbjct: 57  LWVIYWLQDDALKSVYASLLCTEKIFLFAIYTNLSILTTVT 97


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = -3

Query: 673 FFDVLKSLLLNQHSTLFAIVNKP*LL--NKY--FTIYFQIKDLDSIFY*GFQFQVXGLLC 506
           FF V  SLLL  H T F    +  +L  NKY  F I F +     + Y     +    + 
Sbjct: 291 FFIVYVSLLLGPHPTYFGKTGRKTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPVT 350

Query: 505 VMHLKNFNS 479
              L NFN+
Sbjct: 351 NGKLYNFNT 359


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 113 HKKKNHKYICNNKD 154
           H ++  KY+C N+D
Sbjct: 327 HNEQLRKYLCKNED 340


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 113 HKKKNHKYICNNKD 154
           H ++  KY+C N+D
Sbjct: 219 HNEQLRKYLCKNED 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,077
Number of Sequences: 336
Number of extensions: 3343
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)