Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30408
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.13 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +2

Query: 89  MGGAWERMVRAVKAALSATEQPRH--PTPEIFHTLLAEAEFTVNSRPLTHVSVSADDPDP 262
           + G   +++ A+ AAL + E P    PTPE   T   E+E T  S   T  S +      
Sbjct: 371 LSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTT 430

Query: 263 LTP 271
            TP
Sbjct: 431 KTP 433


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 PTSHPRIGERRRSRPSDTEP 276
           P + P +GE R   P   EP
Sbjct: 46  PYAQPPVGENRFEAPKPVEP 65


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 PTSHPRIGERRRSRPSDTEP 276
           P + P +GE R   P   EP
Sbjct: 46  PYAQPPVGENRFEAPKPVEP 65


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 PTSHPRIGERRRSRPSDTEP 276
           P + P +GE R   P   EP
Sbjct: 46  PYAQPPVGENRFEAPKPVEP 65


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 PTSHPRIGERRRSRPSDTEP 276
           P + P +GE R   P   EP
Sbjct: 46  PYAQPPVGENRFEAPKPVEP 65


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 217 PTSHPRIGERRRSRPSDTEP 276
           P + P +GE R   P   EP
Sbjct: 46  PYAQPPVGENRFEAPKPVEP 65


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = +2

Query: 230 HVSVSADDPDPLTPNHFLLGGPARVPVPGKF 322
           H+ +   +P  LTP           P PG F
Sbjct: 213 HIRLHTGEPTDLTPEQIQAAEVKDFPSPGGF 243


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -2

Query: 339 MRSASSNLPGTGTRAGPPSRKWFGVRGSGSSALT 238
           + S S N+P      GPPS  +  +    SS ++
Sbjct: 107 LSSPSGNVPPLTPSPGPPSHPYTVISNGYSSPMS 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,282
Number of Sequences: 336
Number of extensions: 3361
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)