Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30408
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   128   1e-31
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.031
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.38 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    26   0.89 
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    26   0.89 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.7  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    24   3.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.7  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   4.7  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   4.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.3  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  128 bits (310), Expect = 1e-31
 Identities = 62/171 (36%), Positives = 92/171 (53%)
 Frame = +2

Query: 53   IQWRFIPPGAPFMGGAWERMVRAVKAALSATEQPRHPTPEIFHTLLAEAEFTVNSRPLTH 232
            ++W+F PP AP  GG WE  V+++K  L       H T E   TLLAE E  +NSRP+T 
Sbjct: 1530 MKWKFTPPAAPHFGGLWEAAVKSMKFHLKRVLGTGHLTFEDLSTLLAEIEACLNSRPITA 1589

Query: 233  VSVSADDPDPLTPNHFLLGGPARVPVPGKFDDADLIGRAHWRAAQRLADVFWSRWLREYL 412
            +S   +D + LTP HFL+G   +        D       HWR  Q+     W+RW REYL
Sbjct: 1590 ISEDPNDMEALTPGHFLVGNHLQTVADVDIADVPTNRLNHWRLIQKHMQHIWNRWHREYL 1649

Query: 413  PDLQNRREPHSRGPALKIGDVVIIADGTLPRNTWPRGIIQEVYPGADGITR 565
              LQ R + +    +++ G +VI+ +  +  + WP   + +++PG DG+TR
Sbjct: 1650 STLQKRAKWNKNAISIEPGRLVILQEDNVAVSKWPMARVVDLHPGKDGVTR 1700


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 31.1 bits (67), Expect = 0.031
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 211 EQPTSHPRIGERRRSRPSDTEPLPAGRPGASPRAGQ 318
           + PT  P  G ++   P++T+   + RPGA P +GQ
Sbjct: 445 QSPTQSPSPGSQQSLSPANTDENFSYRPGAKPNSGQ 480


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -1

Query: 337 EVGVVKFARHGDSRRASQQEVVRCQRVGIVGAH 239
           ++G  K  +H D+RR  +QEVV   ++ + G +
Sbjct: 493 QLGDAKIDKHEDARRKKKQEVVELFKLEVPGVY 525


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 513 QVFRGSVPSAIITTSPIFRAGPRLWGSRRFCRSGRYSRSQRLQ 385
           Q F   + SA+++ +PIFR+ P    S R  R+ +  R + L+
Sbjct: 310 QSFNALLTSALLSCTPIFRSPPNPPWSNRTLRNLKKDRMKYLR 352


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 517 WPGVPWERSVCYYHDVAYL 461
           WP   WE++   +HDV  L
Sbjct: 265 WPSPAWEKAYVLFHDVGLL 283


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 166 ARNISYSASRG-RVHSEQPTSHPRIGERRRSRPSDTEPLPA 285
           +R++S S SRG R  S    S  R  + R SR     PLPA
Sbjct: 425 SRSVSRSRSRGSRSRSRTSQSRSR-SKTRTSRSRSRTPLPA 464


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 176 FHTLLAEAEFTVNSRPLTHVSVS 244
           FH L + +EFTV++R L + + S
Sbjct: 266 FHALSSNSEFTVSTRVLRNETAS 288


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 172 NISYSASRGRVHSEQPTSHPR-IGERRRSRPSDTEPLPAGRPGASPRAG 315
           ++ Y   +G + +  P  +P  +G +    P      PAG PGA  R G
Sbjct: 135 SLGYPGEKGDLGTPGPPGYPGDVGPKGEPGPKG----PAGHPGAPGRPG 179


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 360 QHNVWQMCSGVAGSGSTCP 416
           Q+NVW      AGS   CP
Sbjct: 270 QYNVWVHVDAYAGSAFICP 288


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 360 QHNVWQMCSGVAGSGSTCP 416
           Q+NVW      AGS   CP
Sbjct: 301 QYNVWVHVDAYAGSAFICP 319


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 11  AMDKATEHEASLKLIQWRFIPPGAPFMGGAWERMVRAVKAALSAT 145
           A+  A EH A + ++   F PP      G WE    + K A+ AT
Sbjct: 21  ALQSAREHRADVLILSDMFTPPN---NNGRWE-FDASRKVAIVAT 61


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 404 EYLPDLQNRREPHSRGPALKI 466
           ++  DL  + EPH  GPA +I
Sbjct: 341 QHKQDLPEQLEPHGFGPAYQI 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,510
Number of Sequences: 2352
Number of extensions: 16044
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)