Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30408
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 59 2e-09
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 45 5e-05
AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 2.8
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.8
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.8
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.8
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.8
Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical p... 29 3.7
Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 3.7
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 3.7
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 29 3.7
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 3.7
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 4.9
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 28 4.9
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 28 6.5
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 8.6
AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical ... 24 8.8
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 59.3 bits (137), Expect = 2e-09
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = +2
Query: 47 KLIQWRFIPPGAPFMGGAWERMVRAVKAALSATEQPRHPTPEIFHTLLAEAEFTVNSRPL 226
K I++R I P AP+ GG +ER+V VKA + +L+ AE +NSRPL
Sbjct: 1900 KDIEFRHITPLAPWQGGIYERLVGLVKAQIIKAIGKNILDFHSLRYVLSGAEAMINSRPL 1959
Query: 227 THVSVSADDPDPLTPNHFLLGGP-ARVPVPG-KFD----DADLIGRAHWRAAQRLADVFW 388
T S DD + P FL G VP +FD + + R H + + + W
Sbjct: 1960 TPNPNSPDDMIAIRPQDFLNPGVLLEVPKNSIRFDPTRSNTEQRTRDHLNKLEGVLNELW 2019
Query: 389 SRWLREYLPDLQNRREPHSRGPAL--KIGDVVII 484
W YL L+ + + + L KIG VV+I
Sbjct: 2020 KLWSLRYLSTLRELKHKNKKCSTLLPKIGQVVLI 2053
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 59.3 bits (137), Expect = 2e-09
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Frame = +2
Query: 47 KLIQWRFIPPGAPFMGGAWERMVRAVKAALSATEQPRHPTPEIFHTLLAEAEFTVNSRPL 226
K I++R I P AP+ GG +ER+V VKA + +L+ AE +NSRPL
Sbjct: 1900 KDIEFRHITPLAPWQGGIYERLVGLVKAQIIKAIGKNILDFHSLRYVLSGAEAMINSRPL 1959
Query: 227 THVSVSADDPDPLTPNHFLLGGP-ARVPVPG-KFD----DADLIGRAHWRAAQRLADVFW 388
T S DD + P FL G VP +FD + + R H + + + W
Sbjct: 1960 TPNPNSPDDMIAIRPQDFLNPGVLLEVPKNSIRFDPTRSNTEQRTRDHLNKLEGVLNELW 2019
Query: 389 SRWLREYLPDLQNRREPHSRGPAL--KIGDVVII 484
W YL L+ + + + L KIG VV+I
Sbjct: 2020 KLWSLRYLSTLRELKHKNKKCSTLLPKIGQVVLI 2053
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2
Query: 386 WSRWLREYLPDLQNR---REPHSR--GPALKIGDVVIIADGTLPRNTWPRGIIQEVYPGA 550
W W + YL +L+ R + R + +G VV+I D LPRN W G I E P
Sbjct: 1052 WKIWNKTYLSELRETHKLRMDNKREINDSPFVGQVVLICDPNLPRNNWKMGKITETKPST 1111
Query: 551 DGITR 565
DGI R
Sbjct: 1112 DGILR 1116
>AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical
protein Y20F4.8 protein.
Length = 345
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Frame = +2
Query: 104 ERMVRAVKAALSATEQPRHPTPEIFHTLLAEAEFTVNSRPLTHVSVSADDPDPLTPNHFL 283
ER+V +K L + T TL+ E E +NSRP+T DD + P F+
Sbjct: 29 ERLVALIKNVLYKVLGKQVVTILELETLVIETEGIINSRPITPNKKDPDDAPAIRPADFI 88
Query: 284 -LGGPARVPVPGK--FD-----DADLIGRAHWRAAQRLADVFWSRWLREY---LPDLQNR 430
P K F+ ++ + R + + + W + + Y L D+++
Sbjct: 89 SYNAQLTRPEHHKSIFEAIQGGESGKLTRQLMEKLRIIKEQLWKEFSKSYIAALRDVEHH 148
Query: 431 REPHSRGPALKIGDVVIIADGTLPRNTWPRGIIQEV 538
++ SR +IG VV++ LPR WP I E+
Sbjct: 149 KKATSRLKP-EIGQVVLVFQKLLPRYAWPMARIVEL 183
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2947
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2959
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2845
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2846
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2928
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2947
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2959
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2845
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2846
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2928
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Frame = +1
Query: 181 YSASRGRVHSEQPTSHPRIGERRRSRPSDTEPLPAGRPGASPRAGQIXXXXXXXXXXXXX 360
YS G P S P + + P EP+PA P +P A +
Sbjct: 395 YSGGGGGGGEAAPPSSPP-ADAAPAPPPAPEPVPA--PAPAPEAAPVAPSADAGGYAAAA 451
Query: 361 STTSG-------RCVLESLAPG--VPARPAEPAGAPQP 447
+ G R V A G PA PAEPA AP P
Sbjct: 452 APAGGGSYPAKKRRVARDYAEGEAAPAAPAEPAPAPAP 489
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 68 IPPGAPFMGGAWERMVRAVKAALSATEQPRH-PTPEIFHTLL 190
IPPG+P GAW ++ S+T+ P H P + + L+
Sbjct: 743 IPPGSPASPGAWSGSNSSLIFMPSSTQAPEHYAIPSVSNVLM 784
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2959
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2959
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -1
Query: 646 PVTTL*NDGPVNCNTTHYRANWVPGP--PSSDAV 551
PVTT NDG +N +T +YR N + G P SD V
Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTV 2959
>Z81486-11|CAB03994.1| 1150|Caenorhabditis elegans Hypothetical
protein C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 392 RWLREYLPDLQNRREPHSRGPALKIGDV 475
R +R+Y+P + P S PAL++GD+
Sbjct: 981 REMRDYIPHALSENIPSSDRPALQVGDI 1008
>Z78015-6|CAB01437.1| 1150|Caenorhabditis elegans Hypothetical protein
C53A5.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 392 RWLREYLPDLQNRREPHSRGPALKIGDV 475
R +R+Y+P + P S PAL++GD+
Sbjct: 981 REMRDYIPHALSENIPSSDRPALQVGDI 1008
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 400 EPATPE-HICQTLCCAPVCAPYEVGVVKFARHGDSRRASQQEVVRCQR 260
+P+ P+ CQ+ C PV AP V V+ A S + Q CQ+
Sbjct: 465 QPSAPQCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQ 512
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 160 PDARNISYSASRGRVHSEQPTSHPRIGERRRSRPSDTEPLPAG-RPGAS 303
P I Y+ R E S PR ER+RSR S T P+ G R G+S
Sbjct: 429 PYPEPIQYTEYSARSPVESSPSPPR-NERKRSRMSTTTPMKNGTRDGSS 476
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 400 EPATPE-HICQTLCCAPVCAPYEVGVVKFARHGDSRRASQQEVVRCQR 260
+PA P+ CQ+ C +PV AP V V+ A S + + CQ+
Sbjct: 452 QPAAPQCQQCQSACQSPVVAPQIVTVILEASVSQSAQCEPECQQSCQQ 499
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Frame = +1
Query: 259 PSDTEPLPAGRPGASPRAGQIXXXXXXXXXXXXXSTTSG------RCVLESLAPG--VPA 414
P+D P PA P P A S G R V A G PA
Sbjct: 46 PADAAPAPA--PAPEPEAAPAAPAADAGGYAAAASAGGGSYPAKKRRVARDYAEGGAAPA 103
Query: 415 RPAEPAGAPQP 447
PAEPA AP P
Sbjct: 104 APAEPASAPAP 114
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 28.3 bits (60), Expect = 4.9
Identities = 26/85 (30%), Positives = 35/85 (41%)
Frame = +2
Query: 2 LRQAMDKATEHEASLKLIQWRFIPPGAPFMGGAWERMVRAVKAALSATEQPRHPTPEIFH 181
LR M K+T + SL IQW +GG W+R + E + E F
Sbjct: 292 LRTLM-KSTRQK-SLDAIQWN--DKITKEIGGFWDRRNEKLSVDEDEDEDEKSLDEETFK 347
Query: 182 TLLAEAEFTVNSRPLTHVSVSADDP 256
+L EAE + + P T S A P
Sbjct: 348 KILHEAENSEDLPPQTSESNKASTP 372
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 224 LTHVSVSADDPDPLTPNHFLLGGPARVPVPGKFDDADLIGRAHWRAAQRL 373
+ H SV AD DP GG + GK+DD DLI +H ++L
Sbjct: 281 IRHFSVCADASDPNENFLIYQGGKSS----GKYDDRDLITISHGDFVEKL 326
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = -1
Query: 487 CYYHDVAYLQGGPAAVGLPPVLQVGQVLPEPATPEHICQTLCCAPVCAPYEVGVVKFARH 308
C+Y + G +V P +Q+ P+P I + P+ ++G V +
Sbjct: 119 CFYKEAEKAVGAEVSVSDPTPVQLEDESPQPVCSYTIHKESPNGPIAKFAQLGDVLYHVW 178
Query: 307 GDSRRASQQEVVRCQRVG 254
A Q EV C VG
Sbjct: 179 ECPSEAYQMEVYNCDVVG 196
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 18 TRRLSMKRA*NLYNGASSHRARLSWAAPGKEWC 116
+RRL ++RA +L+ H ++W A ++ C
Sbjct: 623 SRRLGLERARSLFQFVQDHEEEMAWLAEKEKLC 655
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 18 TRRLSMKRA*NLYNGASSHRARLSWAAPGKEWC 116
+RRL ++RA +L+ H ++W A ++ C
Sbjct: 623 SRRLGLERARSLFQFVQDHEEEMAWLAEKEKLC 655
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 18 TRRLSMKRA*NLYNGASSHRARLSWAAPGKEWC 116
+RRL ++RA +L+ H ++W A ++ C
Sbjct: 623 SRRLGLERARSLFQFVQDHEEEMAWLAEKEKLC 655
>AC092690-3|AAK73857.1| 1145|Caenorhabditis elegans Hypothetical
protein BE0003N10.3 protein.
Length = 1145
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 397 APGVPARPAEPAGAPQP 447
APG P P EP A +P
Sbjct: 609 APGAPGEPGEPEEALEP 625
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 259 PSDTEPLPAGRPGASPRA 312
P E +P G PG +P A
Sbjct: 595 PRAGEEVPVGEPGGAPGA 612
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,973,039
Number of Sequences: 27780
Number of extensions: 344662
Number of successful extensions: 1722
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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