Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30408
(646 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 1.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.3
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 23 3.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 22 4.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.4
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.8
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 7.7
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 1.9
Identities = 22/79 (27%), Positives = 32/79 (40%)
Frame = -1
Query: 568 PSSDAVGPRVNLLDDPTWPGVPWERSVCYYHDVAYLQGGPAAVGLPPVLQVGQVLPEPAT 389
PSS A GP+ + P P +R GGP G PP Q++ PA+
Sbjct: 16 PSSGAPGPQPSPHQSPQAP----QRGSPPNPSQGPPPGGPP--GAPPSQNPSQMMISPAS 69
Query: 388 PEHICQTLCCAPVCAPYEV 332
H Q L + +P ++
Sbjct: 70 GIHQMQQLLQQHILSPTQL 88
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = +1
Query: 214 QPTSHPRIGERRRSRPSDTE--PLPAGRPGASP 306
QP+ H +R P + P P G PGA P
Sbjct: 24 QPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 221 PLTHVSVSADDPDPLTPNHFLL 286
P T+ + D DPL P HF L
Sbjct: 145 PDTYFIMHGDFKDPLIPVHFAL 166
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 221 PLTHVSVSADDPDPLTPNHFLL 286
P T+ + D DPL P HF L
Sbjct: 145 PDTYFIMHGDFKDPLIPVHFAL 166
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 221 PLTHVSVSADDPDPLTPNHFLL 286
P T+ + D DPL P HF L
Sbjct: 196 PDTYFIMHGDFKDPLIPVHFAL 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 221 PLTHVSVSADDPDPLTPNHFLL 286
P T+ + D DPL P HF L
Sbjct: 145 PDTYFIMHGDFKDPLIPVHFAL 166
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -1
Query: 589 ANWVPGPPSSDAVGPRVNLLDDP 521
A +PGPP+ +G ++L P
Sbjct: 41 AEKIPGPPALPLIGNALDLFGSP 63
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.2 bits (45), Expect = 4.4
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +3
Query: 369 VWQMCSGVAGSGSTCPT 419
+W + +G++G S CP+
Sbjct: 136 LWVLDNGISGETSVCPS 152
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 577 PGPPSSDAVGPRVNLLDDP 521
P PPS+ VG + L DP
Sbjct: 298 PTPPSATLVGTTITHLRDP 316
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 619 PVNCNTTHYRANWVPGPPSSDAVG 548
P +C+T YR V P + AVG
Sbjct: 568 PSDCDTLEYRNGEVTTPLFTPAVG 591
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 178 SYSASRGRVHSEQPTSHPRIGERRRSRPSDTE 273
S ++ R R H Q TS ERR SR + E
Sbjct: 213 SSNSLRNRTHDFQHTSSRYSRERRCSRDRNRE 244
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -1
Query: 454 GPAAVGLPPVLQVGQVLPEPATPEHICQTL 365
G + + +PP ++ + P A H+ QTL
Sbjct: 89 GGSIITIPPTRKLPPLHPHTAMVTHLPQTL 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,203
Number of Sequences: 438
Number of extensions: 4228
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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