BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30408 (646 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g39110.1 68417.m05538 protein kinase family protein contains ... 33 0.16 At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein si... 31 0.65 At3g10360.1 68416.m01242 pumilio/Puf RNA-binding domain-containi... 30 1.1 At2g47930.1 68415.m05993 hydroxyproline-rich glycoprotein family... 29 3.5 At5g59100.1 68418.m07404 subtilase family protein contains simil... 28 6.1 At3g03380.1 68416.m00336 DegP protease, putative contains simila... 27 8.1 At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 27 8.1 >At4g39110.1 68417.m05538 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 878 Score = 33.1 bits (72), Expect = 0.16 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = +2 Query: 194 EAEFTVNSRP--LTHVSVSADDPDPLTPNHFLLGGPARVPVPGKFDD 328 +AE T N++P +T SV DP P+TP+ A VPVP K ++ Sbjct: 809 KAEETENAKPDVVTPGSVPVSDPSPITPS-VTTNEAATVPVPAKVEE 854 >At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein similar to GTPase activating protein [Yarrowia lipolytica] GI:2370595; contains Pfam profile PF00566: TBC domain Length = 550 Score = 31.1 bits (67), Expect = 0.65 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = -2 Query: 333 SASSNLPGTGTRAGPPSRKWFGVRGSGSSALTDTWV--RGRLFTVNSASASRV 181 S+SS+LP + + + PPS S SS+ + +W+ R LF N +S S V Sbjct: 25 SSSSSLPSSSS-SSPPSSNSNSYSNSNSSSSSSSWIHLRSVLFVANLSSPSSV 76 >At3g10360.1 68416.m01242 pumilio/Puf RNA-binding domain-containing protein similar to RNA binding protein PufA GB:AAD39751 [Dictyostelium discoideum] and similar to Pumilio protein GB:A46221 [Drosophila sp.] Length = 1003 Score = 30.3 bits (65), Expect = 1.1 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -2 Query: 336 RSASSNLPGTGTRAGPPSRK-WFGVRGSGSSALTDTWVRGRLFTVNSASASRV 181 RS +S LP GTR GP +K FG + T V L +N + S+V Sbjct: 313 RSTASGLPPIGTRVGPVEKKNTFGTAIQNCESYTAADVADTLSRLNMSEMSQV 365 >At2g47930.1 68415.m05993 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 136 Score = 28.7 bits (61), Expect = 3.5 Identities = 18/61 (29%), Positives = 28/61 (45%) Frame = +2 Query: 131 ALSATEQPRHPTPEIFHTLLAEAEFTVNSRPLTHVSVSADDPDPLTPNHFLLGGPARVPV 310 A+S P PTP + +E ++ P S+S +PD +TP+ L P P+ Sbjct: 48 AMSPDTSPLFPTPGSSEMSPSPSESSI--MPTIPSSLSPPNPDAVTPDPLLEVSPVGSPL 105 Query: 311 P 313 P Sbjct: 106 P 106 >At5g59100.1 68418.m07404 subtilase family protein contains similarity to prepro-cucumisin GI:807698 from [Cucumis melo] Length = 741 Score = 27.9 bits (59), Expect = 6.1 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -2 Query: 294 GPPSRKWFGVRGSGSSALTDTWVRG-RLFTVNSASASRV*NISGVGCLGCSVAESAA 127 GPP +KW G G + + V G R +T S + + SG G S+A A Sbjct: 160 GPPPKKWKGTCAGGKNFTCNNKVIGARDYTAKSKANQTARDYSGHGTHTASIAAGNA 216 >At3g03380.1 68416.m00336 DegP protease, putative contains similarity to degP GI:2623992 from [Bradyrhizobium japonicum] Length = 1097 Score = 27.5 bits (58), Expect = 8.1 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +2 Query: 188 LAEAEFTVNSRPLTHVSVSADDPDPLTPNHFL 283 + E E +PL+ VSVS D +TP+HFL Sbjct: 350 ILELEIERGGQPLS-VSVSVQDLHSITPDHFL 380 >At2g17930.1 68415.m02076 FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein contains Pfam profiles PF02259 FAT domain, PF00454 Phosphatidylinositol 3- and 4-kinase, PF02260: FATC domain Length = 3795 Score = 27.5 bits (58), Expect = 8.1 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +2 Query: 296 ARVPVPGKFDDA-DLIGRAHWRAAQRLADVFWSRWLREYLPDLQNRREPHSRGPALKIGD 472 ARV FD A + +G+ + ++ W W+ + L LQ PH + LKI Sbjct: 3059 ARVLYLLSFDTANEPVGKVFDKHLDQVPHWVWLSWIPQLLLSLQRTEAPHCKLVLLKIAA 3118 Query: 473 V 475 V Sbjct: 3119 V 3119 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,291,861 Number of Sequences: 28952 Number of extensions: 316304 Number of successful extensions: 1018 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 957 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1018 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1334473344 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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