Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30406
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -3

Query: 332 YYYYYFCALQI*FYLMHKIVTF*SNFKIELLNGHFVCTSLFRCMLY 195
           Y+YY F  L   +Y  +  + F  +    L   +FV    F   +Y
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY 147



 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 562 SFIVFTIHLML 530
           +FI+FT+HL+L
Sbjct: 244 AFILFTVHLLL 254



 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -1

Query: 562 SFIVFTIHLM 533
           +FI+FTIHL+
Sbjct: 218 AFIIFTIHLL 227



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -1

Query: 562 SFIVFTIHLM 533
           +FI+FT+HL+
Sbjct: 119 AFIIFTVHLL 128



 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -1

Query: 562 SFIVFTIHLM 533
           +FI+FT+HL+
Sbjct: 152 AFIIFTVHLL 161


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 225 LYIFIQMYVIYYW 187
           LY+    Y +YYW
Sbjct: 110 LYVLTLCYAVYYW 122


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 608 LPLNTLQSAYVGGAIYKNT 664
           +PLN +Q+    G  YK+T
Sbjct: 359 MPLNNIQNLSQSGINYKDT 377


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,016
Number of Sequences: 336
Number of extensions: 3229
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)