BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30406
(682 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 24 3.9
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 3.9
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 24 5.1
AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding pr... 23 6.7
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 23 8.9
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 23 8.9
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 23 8.9
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 23 8.9
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 24.2 bits (50), Expect = 3.9
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = -2
Query: 219 IFIQMYVIYYWIHWSYIHFAPHLKIELN 136
+ + ++V ++ I W Y HF LN
Sbjct: 2 LIVAVFVAFFGIFWIYFHFRQRYLFWLN 29
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 3.9
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 98 RAKLARCTICTRLQNIVCTH 39
R ++RCT+C N++ H
Sbjct: 897 RPYISRCTVCEAPTNVIAVH 916
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 23.8 bits (49), Expect = 5.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 98 YCPLSLEQYQEDIFNSILRWGAKC 169
YCP+ LE +++ + W A C
Sbjct: 33 YCPIPLEVLEQENGTAPADWSASC 56
>AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding
protein AgamOBP53 protein.
Length = 171
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -2
Query: 216 FIQMYVIYYWIHWSYIHF-APH 154
F+ MY IYY W ++ F PH
Sbjct: 10 FLFMYNIYYRALWLFLKFEVPH 31
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 344 IGLDYYYYYF 315
IGL+ YYYYF
Sbjct: 229 IGLNAYYYYF 238
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 344 IGLDYYYYYF 315
IGL+ YYYYF
Sbjct: 229 IGLNAYYYYF 238
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 344 IGLDYYYYYF 315
IGL+ YYYYF
Sbjct: 229 IGLNAYYYYF 238
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -3
Query: 344 IGLDYYYYYF 315
IGL+ YYYYF
Sbjct: 229 IGLNAYYYYF 238
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,320
Number of Sequences: 2352
Number of extensions: 12822
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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