Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30405
(797 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 254 2e-66
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 254 2e-66
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 251 2e-65
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 247 2e-64
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 244 3e-63
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 242 6e-63
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 233 4e-60
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 232 7e-60
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 232 7e-60
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 232 9e-60
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 226 6e-58
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 210 3e-53
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 208 1e-52
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 208 2e-52
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 201 2e-50
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 200 3e-50
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 200 4e-50
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 199 6e-50
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 188 2e-46
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 186 6e-46
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 185 1e-45
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 184 2e-45
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 184 2e-45
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 179 9e-44
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 172 1e-41
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 171 2e-41
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 163 6e-39
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 159 1e-37
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 158 2e-37
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 157 3e-37
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 156 5e-37
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 156 7e-37
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 152 1e-35
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 147 3e-34
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 138 1e-31
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 132 1e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 130 5e-29
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 126 9e-28
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 120 4e-26
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 120 6e-26
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 119 1e-25
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 115 1e-24
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 115 1e-24
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 115 1e-24
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 115 2e-24
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 114 2e-24
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 111 3e-23
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 109 6e-23
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 109 8e-23
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 109 1e-22
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 108 2e-22
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 106 6e-22
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 105 1e-21
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 104 2e-21
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 102 9e-21
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 101 2e-20
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 100 8e-20
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 96 8e-19
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 96 1e-18
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 95 2e-18
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 92 1e-17
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 92 1e-17
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 92 1e-17
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 91 2e-17
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 91 3e-17
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 91 4e-17
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 90 5e-17
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 90 7e-17
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 90 7e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 89 9e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 87 4e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 87 6e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 86 1e-15
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 85 2e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 85 3e-15
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 85 3e-15
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 84 3e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 84 4e-15
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 82 2e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 6e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 80 7e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 77 5e-13
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 77 7e-13
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 77 7e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 75 2e-12
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 75 3e-12
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 74 5e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 3e-11
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 69 1e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 67 4e-10
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 63 7e-09
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 2e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 57 4e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 51 3e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 48 4e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 8e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 45 0.003
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.51
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.7
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 6.3
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 8.3
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 254 bits (622), Expect = 2e-66
Identities = 140/257 (54%), Positives = 151/257 (58%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLS
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLS 130
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
SNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 131 SNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAF 190
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 191 LLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVS 250
Query: 723 ISHIISQEEEKRNFWVV 773
+ ++ EK VV
Sbjct: 251 FHMLFPKKVEKSKLLVV 267
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 254 bits (622), Expect = 2e-66
Identities = 132/208 (63%), Positives = 140/208 (67%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILI 704
FDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 193 FDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 251 bits (614), Expect = 2e-65
Identities = 135/252 (53%), Positives = 152/252 (60%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDLAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 135 GNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAV 194
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+
Sbjct: 195 LLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGM 254
Query: 723 ISHIISQEEEKR 758
ISH+++ K+
Sbjct: 255 ISHVVTYYAGKK 266
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 247 bits (605), Expect = 2e-64
Identities = 132/252 (52%), Positives = 149/252 (59%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 134 GNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGI
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGI 253
Query: 723 ISHIISQEEEKR 758
ISH+++ K+
Sbjct: 254 ISHVVAYYAGKK 265
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 244 bits (596), Expect = 3e-63
Identities = 129/252 (51%), Positives = 149/252 (59%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 134 GNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGM 253
Query: 723 ISHIISQEEEKR 758
ISH+++ K+
Sbjct: 254 ISHVVTYYAGKK 265
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 242 bits (593), Expect = 6e-63
Identities = 129/252 (51%), Positives = 149/252 (59%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLA 133
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N +H G SVDL IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 134 GNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAV 193
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+
Sbjct: 194 LLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGM 253
Query: 723 ISHIISQEEEKR 758
ISHI++ K+
Sbjct: 254 ISHIVTYYSGKK 265
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 233 bits (570), Expect = 4e-60
Identities = 127/219 (57%), Positives = 147/219 (67%)
Frame = -2
Query: 667 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 488
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 487 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 308
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 307 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 128
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 127 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 11
L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 232 bits (568), Expect = 7e-60
Identities = 120/226 (53%), Positives = 141/226 (62%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKR 758
FDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E K+
Sbjct: 204 FDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGKK 249
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 232 bits (568), Expect = 7e-60
Identities = 125/248 (50%), Positives = 144/248 (58%), Gaps = 2/248 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
A AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGF 251
Query: 717 GIISHIIS 740
G++SHI+S
Sbjct: 252 GMVSHIVS 259
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 232 bits (567), Expect = 9e-60
Identities = 123/248 (49%), Positives = 145/248 (58%), Gaps = 2/248 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N VP+++GAPD+AFPR+NNI F +VE G+GTG TVYPP
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPP 134
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G +VDLAIFSLHL+G+SS + +LPLFV +V +T
Sbjct: 135 LSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVT 194
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
AF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 195 AFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGF 254
Query: 717 GIISHIIS 740
GIISHI+S
Sbjct: 255 GIISHIVS 262
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 226 bits (552), Expect = 6e-58
Identities = 122/256 (47%), Positives = 147/256 (57%), Gaps = 2/256 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++G+PD+AFPR+NNI F +VE G GTG TVYPP
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPP 139
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS +H G +VDLAIFSLH++G SS S ++PLFV ++ +T
Sbjct: 140 LSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVT 199
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
AF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGF
Sbjct: 200 AFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGF 259
Query: 717 GIISHIISQEEEKRNF 764
G+ISHI+S K F
Sbjct: 260 GMISHIVSTFSRKPVF 275
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 210 bits (513), Expect = 3e-53
Identities = 117/256 (45%), Positives = 140/256 (54%), Gaps = 2/256 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS AH G SVDLAIF+LHL ISS + +LPLFV ++ IT
Sbjct: 133 LSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
AF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGF
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGF 252
Query: 717 GIISHIISQEEEKRNF 764
GIISH++S +K F
Sbjct: 253 GIISHVVSTYSKKPVF 268
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 208 bits (508), Expect = 1e-52
Identities = 118/255 (46%), Positives = 135/255 (52%), Gaps = 1/255 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPL 359
N L+PL LG PD+ FPR+NNI + +ENG GTG T+YPPL
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPL 133
Query: 360 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
S +H G SVDLAIF LHL+GISS +L LF AV ITA
Sbjct: 134 SGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITA 193
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 719
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFG
Sbjct: 194 VLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFG 253
Query: 720 IISHIISQEEEKRNF 764
IIS IS K F
Sbjct: 254 IISTTISANSNKSVF 268
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 208 bits (507), Expect = 2e-52
Identities = 112/230 (48%), Positives = 135/230 (58%), Gaps = 2/230 (0%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
N+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 99 NSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
S ++PLFV A+ ITAF + IT+LL DRN NT
Sbjct: 159 LLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNT 218
Query: 615 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
SFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S +K F
Sbjct: 219 SFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVSTYSKKPVF 268
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 201 bits (490), Expect = 2e-50
Identities = 107/229 (46%), Positives = 130/229 (56%), Gaps = 1/229 (0%)
Frame = +3
Query: 81 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
N+ + I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 126 NVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSL 185
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
+L LF AV ITA A AIT+LLTDRNLNTS
Sbjct: 186 LGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTS 245
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
F++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K F
Sbjct: 246 FYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVISANSNKNVF 294
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 200 bits (488), Expect = 3e-50
Identities = 108/226 (47%), Positives = 127/226 (56%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLA 134
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
S AH G SVD+AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 135 SIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAI 194
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 195 LLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 200 bits (487), Expect = 4e-50
Identities = 107/230 (46%), Positives = 125/230 (54%), Gaps = 2/230 (0%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
NN F E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 102 NNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
LPLFV +V +T+F A AIT+LL DRN NT
Sbjct: 162 IVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNT 221
Query: 615 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
SF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ +KR F
Sbjct: 222 SFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIATFSKKRVF 271
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 199 bits (486), Expect = 6e-50
Identities = 105/196 (53%), Positives = 118/196 (60%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 621 FDPAGGGDPILYQHLF 668
FDPAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 188 bits (457), Expect = 2e-46
Identities = 106/224 (47%), Positives = 121/224 (54%), Gaps = 2/224 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 668
A AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 192 AILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 186 bits (453), Expect = 6e-46
Identities = 111/259 (42%), Positives = 134/259 (51%), Gaps = 5/259 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 179
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV---- 347
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDK 161
Query: 348 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 527
YPPLS +H G SVDLAIF+LHL+G+SS +L LF A
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWAT 221
Query: 528 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 707
+ IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+
Sbjct: 222 WSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILII 274
Query: 708 PGFGIISHIISQEEEKRNF 764
PGFGIIS IS K F
Sbjct: 275 PGFGIISTTISSSSNKPIF 293
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 185 bits (451), Expect = 1e-45
Identities = 94/231 (40%), Positives = 130/231 (56%), Gaps = 2/231 (0%)
Frame = +3
Query: 78 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 251
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 252 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 431
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 612 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++ +K F
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVATFSKKPIF 373
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 184 bits (448), Expect = 2e-45
Identities = 94/225 (41%), Positives = 129/225 (57%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 629
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 630 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ +K F
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQVYAKKPIF 285
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 184 bits (448), Expect = 2e-45
Identities = 94/225 (41%), Positives = 129/225 (57%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 629
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 630 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
+GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ +K F
Sbjct: 241 SGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIVQVYAKKPIF 285
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 179 bits (435), Expect = 9e-44
Identities = 99/219 (45%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 300 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 467
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 468 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 647
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Query: 648 ILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
LYQHLF FFGHPEVYI+ILPGFGIIS I+S K F
Sbjct: 272 ELYQHLFWFFGHPEVYIMILPGFGIISQIVSTFSRKPVF 310
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 172 bits (418), Expect = 1e-41
Identities = 98/209 (46%), Positives = 111/209 (53%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLA 122
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 542
N+AH G SVDL IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 123 GNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAV 182
Query: 543 XXXXXXXXXAGAITILLTDRNLNTSFFDP 629
A IT+LLTDRNLNT+FFDP
Sbjct: 183 LLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 171 bits (415), Expect = 2e-41
Identities = 100/237 (42%), Positives = 121/237 (51%), Gaps = 2/237 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LSS AH G SVDLAIF+LHL ISS + +LPLFV ++ IT
Sbjct: 133 LSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 707
AF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 193 AFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 163 bits (395), Expect = 6e-39
Identities = 94/228 (41%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N ++PL++GA D AFPRINNI F +VE+GAGTG TVYPP
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPP 132
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
L+S AH G SVDLAIF+LH+ ISS + +LPLFV A+ IT
Sbjct: 133 LASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILIT 192
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 680
A + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 193 AVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 159 bits (385), Expect = 1e-37
Identities = 87/156 (55%), Positives = 96/156 (61%)
Frame = +3
Query: 216 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 395
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 396 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 575
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 576 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 683
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 158 bits (383), Expect = 2e-37
Identities = 88/252 (34%), Positives = 123/252 (48%), Gaps = 1/252 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N +PL++ D++ PR+NN+ + G G G T+YPPLS
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLS 135
Query: 363 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITA 539
++ G +DLA+FSLH+AG+SS F L P+ + + T+
Sbjct: 136 NSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTS 195
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 719
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG
Sbjct: 196 ILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFG 255
Query: 720 IISHIISQEEEK 755
+ISHI+ + K
Sbjct: 256 VISHILCRSSAK 267
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 157 bits (381), Expect = 3e-37
Identities = 82/214 (38%), Positives = 108/214 (50%)
Frame = +3
Query: 96 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 275
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 276 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 455
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 456 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 635
SF LF+ A ITA AG +T++L DRN NTSF+D G
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG 227
Query: 636 GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
GGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 228 GGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 156 bits (379), Expect = 5e-37
Identities = 87/236 (36%), Positives = 130/236 (55%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 629
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 630 AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNFWVVRNNLCLLA 797
+GGGDP+LY+H+F FFG +++ +I+ II++ I ++ K+ + N+ C +A
Sbjct: 241 SGGGDPLLYEHIFWFFG--QIWPIIIIIIIIINYAICGKDFKK---IYTNSPCYIA 291
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 156 bits (378), Expect = 7e-37
Identities = 93/237 (39%), Positives = 117/237 (49%), Gaps = 2/237 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL+LGA D+AF R+NNI F +VE GAGTG TVY P
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFP 137
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
L+ +H G +VDLAIFSLHL+G SS ++ +PLF AV T
Sbjct: 138 LAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFT 197
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 707
A A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 198 AILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 152 bits (368), Expect = 1e-35
Identities = 82/221 (37%), Positives = 110/221 (49%), Gaps = 2/221 (0%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
N + F + G G+ T YPPLS S+D I LH GI S
Sbjct: 109 NALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGS 167
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
+ DQ+ +FV +T+F AG++ LL DRN NT
Sbjct: 168 LLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNT 227
Query: 615 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
SF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 228 SFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 147 bits (356), Expect = 3e-34
Identities = 83/211 (39%), Positives = 115/211 (54%)
Frame = +3
Query: 90 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 269
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 270 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 449
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 450 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 629
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 630 AGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
+GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 241 SGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 138 bits (335), Expect = 1e-31
Identities = 76/208 (36%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 300 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXX 476
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHL 177
Query: 477 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 656
+ L + ++ IT+ G + +LL+D + NT FFDP GDPILY
Sbjct: 178 RAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILY 237
Query: 657 QHLF*FFGHPEVYILILPGFGIISHIIS 740
QHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 238 QHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 132 bits (318), Expect = 1e-29
Identities = 73/216 (33%), Positives = 105/216 (48%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 297 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXX 476
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSV 177
Query: 477 XXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILY 656
D++ ++ +T+F ++ DR+ NT FF+ + GDP+LY
Sbjct: 178 KTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLY 237
Query: 657 QHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
QHLF FFGHPEVYI+ILPGFGIIS ++S K F
Sbjct: 238 QHLFWFFGHPEVYIMILPGFGIISLLLSTYTTKEMF 273
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 130 bits (313), Expect = 5e-29
Identities = 79/205 (38%), Positives = 99/205 (48%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
+YN +VT H N +P+ L D+ PR+N++
Sbjct: 151 VYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYM 210
Query: 300 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 479
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 211 ELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRL 267
Query: 480 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 659
S + V A T+ A IT+LL DRN T+FF+P+GGGDPIL+Q
Sbjct: 268 SFNCS-----IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQ 322
Query: 660 HLF*FFGHPEVYILILPGFGIISHI 734
HLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 323 HLFWFFGHPEVYVLILPGFGIVSHI 347
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 126 bits (303), Expect = 9e-28
Identities = 78/193 (40%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TVYPP
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPP 131
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS +H G SVDLAIFSLHL+GISS + +LPLFV A+ +T
Sbjct: 132 LSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVT 191
Query: 537 AFXXXXXXXXXAG 575
A AG
Sbjct: 192 AILLLLSLPVLAG 204
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 120 bits (289), Expect = 4e-26
Identities = 90/262 (34%), Positives = 119/262 (45%), Gaps = 8/262 (3%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*TVYP 353
N L+PL++GA D+AFPRIN I F I E A TG T+Y
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYT 214
Query: 354 PLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 518
PLS N A+ G VDL + LHL+G+S+ S+ L +F
Sbjct: 215 PLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFS 272
Query: 519 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 698
+ + AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI
Sbjct: 273 WTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYI 330
Query: 699 LILPGFGIISHIISQEEEKRNF 764
++LP GIIS+I+ + +R F
Sbjct: 331 IVLPPMGIISYILPRFSGRRLF 352
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 120 bits (288), Expect = 6e-26
Identities = 72/221 (32%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Frame = +3
Query: 123 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 302
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 303 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 479
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 480 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 644
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 645 PILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNFW 767
PIL+QHLF FGHPEVYI+ILP +GI+ ++S K + W
Sbjct: 266 PILWQHLFWIFGHPEVYIMILPAWGILGDVLSFFARKPHHW 306
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 119 bits (286), Expect = 1e-25
Identities = 77/219 (35%), Positives = 104/219 (47%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 95 LSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLI 145
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ L LF ++ + + A IT++LTD++L T F
Sbjct: 146 SSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCF 203
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 204 YDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 115 bits (277), Expect = 1e-24
Identities = 70/215 (32%), Positives = 99/215 (46%)
Frame = +3
Query: 93 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 272
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 273 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 452
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 453 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 632
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 633 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 180 KGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 115 bits (277), Expect = 1e-24
Identities = 73/229 (31%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ ++ G TG T Y P S AH +V +F + G SS
Sbjct: 130 LSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIV 185
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTS 617
++ ++PLFV A+ T+ G + +L+T NL
Sbjct: 186 TGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFG 244
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++ K F
Sbjct: 245 MFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATYSRKNIF 293
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 115 bits (277), Expect = 1e-24
Identities = 71/219 (32%), Positives = 98/219 (44%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
F + + G Y PLSS + VD I L + GI S
Sbjct: 119 FGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVS 178
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
S ++PLFV + + A A+ +LL DR L ++F
Sbjct: 179 GAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAF 238
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
FDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 239 FDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 115 bits (276), Expect = 2e-24
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Frame = +3
Query: 120 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 299
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 300 XXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 473
++ +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKY 182
Query: 474 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 653
+F + ++ ++ +T+ AIT LL DRN+N++ +D G DP+L
Sbjct: 183 NRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVL 240
Query: 654 YQHLF*FFGHPEVYILILPGFGIISHIIS 740
YQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 241 YQHLFWFFGHPEVYVIILPVFGLTSLILT 269
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 114 bits (275), Expect = 2e-24
Identities = 76/228 (33%), Positives = 99/228 (43%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F V G T YPPLS G +L I SL L G SS
Sbjct: 114 VAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSIL 170
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+PLF A+ T+ A A+ +L D TSF
Sbjct: 171 GAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSF 230
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
F+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I K F
Sbjct: 231 FNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVIPVHARKPIF 278
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 111 bits (266), Expect = 3e-23
Identities = 74/240 (30%), Positives = 108/240 (45%), Gaps = 1/240 (0%)
Frame = +3
Query: 81 ELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
+L P + IG D+ YN I T H LVPL++G IAFPR+N
Sbjct: 57 QLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRLN 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ V+ G G Y PLS G+ D+ + +S+
Sbjct: 115 AFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSAL 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S D++PLFV ++ +T+F A T L+ DR + T
Sbjct: 175 AIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTH 234
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNFWVVRNNLCLLA 797
FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ ++ F + + L+A
Sbjct: 235 FFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFTQRPVFGYLAMVMALIA 294
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 109 bits (263), Expect = 6e-23
Identities = 75/256 (29%), Positives = 109/256 (42%), Gaps = 2/256 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPP 356
N +PL++ A D+AFPRIN I F ++ A T T+Y P
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTP 188
Query: 357 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
LS ++ +VD+ + LHL G+S+ + L +F +
Sbjct: 189 LSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQ 246
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP
Sbjct: 247 SGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPM 305
Query: 717 GIISHIISQEEEKRNF 764
GI+S I+ + ++ F
Sbjct: 306 GIVSLILPKFSGRKLF 321
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 109 bits (262), Expect = 8e-23
Identities = 69/221 (31%), Positives = 97/221 (43%), Gaps = 3/221 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 261 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 431
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 612 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 734
TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 243 TSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 109 bits (261), Expect = 1e-22
Identities = 72/228 (31%), Positives = 96/228 (42%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLNA 117
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ V G Y PL+ VD I + L G++S
Sbjct: 118 LSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIA 177
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ +++PLFV + AF A LL DR+ T F
Sbjct: 178 GALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRF 237
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
F P GGD +L+QHLF FFGHPEVYILILP GIIS ++ K F
Sbjct: 238 FLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVLPTFSRKPIF 285
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 108 bits (259), Expect = 2e-22
Identities = 67/228 (29%), Positives = 98/228 (42%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F +V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 123 LSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSIL 178
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
+ +LPLFV ++ T+ ++ ++ +
Sbjct: 179 TGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGI 238
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ K F
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVCAFSRKNIF 286
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 106 bits (255), Expect = 6e-22
Identities = 73/233 (31%), Positives = 99/233 (42%), Gaps = 1/233 (0%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
F + GA G T+Y PLS I G D+ I + GI S
Sbjct: 124 AFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGS 183
Query: 435 XXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 614
+ ++P+F + + + A +L DR L
Sbjct: 184 VASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGG 243
Query: 615 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNFWVV 773
+DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II K F V
Sbjct: 244 HLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEIIPVFSRKPMFGYV 295
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 105 bits (252), Expect = 1e-21
Identities = 64/194 (32%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 377
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 378 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 557
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 558 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 722
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G+
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGL 263
Query: 723 ISHIISQEEEKRNF 764
+S +I + +R +
Sbjct: 264 VSEVIQRMARRRAY 277
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 104 bits (250), Expect = 2e-21
Identities = 69/229 (30%), Positives = 95/229 (41%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
N+ F ++ G T Y PL+SN G + + L +AGI +
Sbjct: 139 NLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTL 198
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
+ ++P+F IT A+ +L DR
Sbjct: 199 MTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAH 258
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS K+ F
Sbjct: 259 FFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIISSFARKQLF 307
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 102 bits (245), Expect = 9e-21
Identities = 62/228 (27%), Positives = 98/228 (42%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + Q YN ++T H N +VPL +GA D++FP +N
Sbjct: 52 QLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFLNA 110
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ F + G T Y LS + +G +D + L ++G+ +
Sbjct: 111 LGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLI 168
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
++ +LPLF + + + +++ DR T+F
Sbjct: 169 AGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNF 228
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
F+P GG+ ++++HLF FGHPEVYILILP FGI S +I KR F
Sbjct: 229 FNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVIPVFARKRLF 276
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 101 bits (242), Expect = 2e-20
Identities = 73/248 (29%), Positives = 102/248 (41%), Gaps = 2/248 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY +L P S Y VT H
Sbjct: 23 DIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPF 82
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPL 359
N +VPL +GA D+AFPR+N + + E+GA G T+Y PL
Sbjct: 83 AFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPL 141
Query: 360 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
++ I G +DLA ++ L +S + ++P+F ++ T
Sbjct: 142 TARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTV 201
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGF 716
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P
Sbjct: 202 ILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPAL 259
Query: 717 GIISHIIS 740
G ++ +IS
Sbjct: 260 GAMADVIS 267
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 99.5 bits (237), Expect = 8e-20
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 297 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 464
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 465 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 629
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 630 ------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
AGGG P+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 96.3 bits (229), Expect = 8e-19
Identities = 76/243 (31%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Frame = +3
Query: 81 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 258 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 428
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 429 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 605
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 606 LNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEK 755
L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +IS K
Sbjct: 245 LGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDLISTHARK 304
Query: 756 RNF 764
F
Sbjct: 305 NIF 307
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 95.9 bits (228), Expect = 1e-18
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 1/229 (0%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVNA 111
Query: 261 IRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ GA G T Y P S A VD + ++ L G SS
Sbjct: 112 FSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFSSL 168
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S ++P++V +V + A ++L +R + S
Sbjct: 169 LGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLS 228
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S K F
Sbjct: 229 WFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVASTFARKPLF 277
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 95.1 bits (226), Expect = 2e-18
Identities = 60/188 (31%), Positives = 85/188 (45%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 561 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVS 304
Query: 741 QEEEKRNF 764
KR F
Sbjct: 305 TFAGKRLF 312
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 92.3 bits (219), Expect = 1e-17
Identities = 66/230 (28%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Frame = +3
Query: 81 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
+ + + T YPP S I H + FS+ L G +S
Sbjct: 102 ALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGFASI 158
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNT 614
+++L +FV A + AF G A+T+L D+ + T
Sbjct: 159 LGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGT 217
Query: 615 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++ R F
Sbjct: 218 HFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARNRVF 267
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 92.3 bits (219), Expect = 1e-17
Identities = 71/252 (28%), Positives = 103/252 (40%), Gaps = 1/252 (0%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXX 179
D+G LY AEL PG+ I D +N + T H
Sbjct: 22 DVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILP 81
Query: 180 XXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPL 359
N VP+++ D+A+P++N I F + T PP
Sbjct: 82 FASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPY 135
Query: 360 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 539
S I+ G + D+ IF L + GISS S Q+PL + ++
Sbjct: 136 SV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSS 194
Query: 540 FXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 719
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G
Sbjct: 195 LIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIG 254
Query: 720 IISHIISQEEEK 755
++ ++ + K
Sbjct: 255 MMYEMVPRFSRK 266
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 92.3 bits (219), Expect = 1e-17
Identities = 59/188 (31%), Positives = 82/188 (43%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 561 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTS 303
Query: 741 QEEEKRNF 764
KR F
Sbjct: 304 TFAGKRLF 311
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/95 (51%), Positives = 57/95 (60%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N+ F VE GAGTG TVYPPL+
Sbjct: 100 NMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 91.1 bits (216), Expect = 3e-17
Identities = 55/177 (31%), Positives = 79/177 (44%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 567 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 90.6 bits (215), Expect = 4e-17
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 14/232 (6%)
Frame = +3
Query: 111 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 290
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 291 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 458
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 459 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 629
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 630 -AG------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
AG GG P+L+QHLF F GHPEVYI+++P GI S +I+ K F
Sbjct: 278 IAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITSEVIATNARKPIF 329
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 90.2 bits (214), Expect = 5e-17
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 4/232 (1%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNA 115
Query: 261 IRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 428
+ ++ G G Y L+S G D L L GI
Sbjct: 116 FSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGI 175
Query: 429 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 608
+ + ++P+FV +T+ A+ +L+ DR
Sbjct: 176 GTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTF 235
Query: 609 NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
+FF+ GG + YQHLF FGHPEVYILILP GIIS +I K F
Sbjct: 236 AANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVIPVHARKMLF 287
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 89.8 bits (213), Expect = 7e-17
Identities = 61/220 (27%), Positives = 88/220 (40%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 56 AQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRLT 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
F + +G +YPPLSS + G + D + + IS+
Sbjct: 115 AYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAI 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S ++P+F +TA +L +R +
Sbjct: 175 AAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMP 234
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 235 FFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 89.8 bits (213), Expect = 7e-17
Identities = 52/177 (29%), Positives = 81/177 (45%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 567 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 89.4 bits (212), Expect = 9e-17
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +3
Query: 603 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKR 758
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ KR
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKR 242
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 87.4 bits (207), Expect = 4e-16
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 377
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 378 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 557
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVWGFFTTAILMIIA 196
Query: 558 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
Query: 738 SQEEEKRNF 764
+ + F
Sbjct: 257 PKMARREIF 265
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 86.6 bits (205), Expect = 6e-16
Identities = 60/216 (27%), Positives = 89/216 (41%)
Frame = +3
Query: 81 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 260
+L P + + Y+++ T H N L PL+LG+ D+AFPR+
Sbjct: 77 QLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRLTA 135
Query: 261 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 440
+ + G Y PL+S G ++D+ + L GIS+
Sbjct: 136 FSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGISTTG 195
Query: 441 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 620
S D+LP+ V + + A +L DRN T F
Sbjct: 196 GAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHF 255
Query: 621 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 728
FD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 256 FDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 85.8 bits (203), Expect = 1e-15
Identities = 68/197 (34%), Positives = 80/197 (40%)
Frame = +3
Query: 84 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 263
L G +IG QI VTA A L PL +GAP +A PR+ N+
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 264 RFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXX 443
F + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 91 SFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLG 150
Query: 444 XXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 623
++ LF A AIT+L R N SFF
Sbjct: 151 SMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFF 210
Query: 624 DPAGGGDPILYQHLF*F 674
P G P + F F
Sbjct: 211 XPXXXGXPXXFPTFFXF 227
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 85.0 bits (201), Expect = 2e-15
Identities = 59/212 (27%), Positives = 85/212 (40%)
Frame = +3
Query: 102 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 281
L+G D YN I T H L+P +L A D+ FPR++
Sbjct: 75 LVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYI 132
Query: 282 XXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 461
+ G +YPPL+ G + D + + IS+
Sbjct: 133 VGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIV 192
Query: 462 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 641
S ++P+F A+ I A A +L +R+ FF GG
Sbjct: 193 GTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGG 252
Query: 642 DPILYQHLF*FFGHPEVYILILPGFGIISHII 737
DP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 253 DPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 84.6 bits (200), Expect = 3e-15
Identities = 58/220 (26%), Positives = 89/220 (40%)
Frame = +3
Query: 78 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 257
A+L +P S + Y + T H L+P +LG+ D+A+PR++
Sbjct: 56 AQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRLS 114
Query: 258 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSX 437
F + +G +YPPL+S + G + D + + IS+
Sbjct: 115 AYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEISAI 174
Query: 438 XXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTS 617
S D++P++ +TA +L +R
Sbjct: 175 AAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLP 234
Query: 618 FFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 235 FFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 84.6 bits (200), Expect = 3e-15
Identities = 54/180 (30%), Positives = 80/180 (44%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 561 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 84.2 bits (199), Expect = 3e-15
Identities = 57/180 (31%), Positives = 77/180 (42%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 561 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFS 323
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 83.8 bits (198), Expect = 4e-15
Identities = 51/144 (35%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +3
Query: 336 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 506
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 507 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 686
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 687 EVYILILPGFGIISHIISQEEEKR 758
EVY+LI+P FG I+ I+ +R
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
Score = 37.9 bits (84), Expect = 0.29
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 81 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 255 NNIRF 269
N+I F
Sbjct: 148 NSIGF 152
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 81.8 bits (193), Expect = 2e-14
Identities = 51/177 (28%), Positives = 78/177 (44%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 567 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 2e-14
Identities = 67/233 (28%), Positives = 98/233 (42%), Gaps = 16/233 (6%)
Frame = +3
Query: 87 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 266
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 267 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 431
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 432 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 611
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 612 TSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +3
Query: 216 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 395
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 396 LAIFS 410
LAI+S
Sbjct: 61 LAIYS 65
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +2
Query: 515 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 682
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.8 bits (188), Expect = 7e-14
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 14/222 (6%)
Frame = +3
Query: 117 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 296
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 297 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 467
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 468 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG---- 635
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 636 -------GGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
GG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 77.0 bits (181), Expect = 5e-13
Identities = 46/177 (25%), Positives = 75/177 (42%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 567 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
+ +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +2
Query: 602 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTGR 748
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSK 55
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 76.6 bits (180), Expect = 7e-13
Identities = 49/125 (39%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCK 131
Query: 357 LSSNI 371
LS I
Sbjct: 132 LSQII 136
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 74.9 bits (176), Expect = 2e-12
Identities = 53/188 (28%), Positives = 79/188 (42%)
Frame = +3
Query: 201 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 380
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 561 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEIIP 322
Query: 741 QEEEKRNF 764
EK F
Sbjct: 323 TFAEKPLF 330
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 74.5 bits (175), Expect = 3e-12
Identities = 53/214 (24%), Positives = 79/214 (36%)
Frame = +3
Query: 123 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 302
YN ++T HA N +PL LG D+A PR+N
Sbjct: 74 YNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVV 133
Query: 303 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 482
G T Y PL+ + G SV + L+ G+ S
Sbjct: 134 LGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRA 191
Query: 483 XXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 662
++P+F ++ T+ A + + L S F+P GG P+LYQ
Sbjct: 192 PGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQ 251
Query: 663 LF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
F F+ HP VY+++LP GI + + S K F
Sbjct: 252 FFWFYSHPAVYVMLLPYLGIGAEVASTMARKPLF 285
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 73.7 bits (173), Expect = 5e-12
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 383
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 384 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 563
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 564 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 740
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 354 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 533
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 534 TAFXXXXXXXXXAGAITILLTDR 602
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 188 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 313
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 69.3 bits (162), Expect = 1e-10
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 176
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 347
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 67.3 bits (157), Expect = 4e-10
Identities = 60/255 (23%), Positives = 92/255 (36%), Gaps = 13/255 (5%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 182
DIG LY EL + G+ + YN V+ H
Sbjct: 24 DIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPF 83
Query: 183 XXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 362
N LVPL +GA D+AFPR+N + + G T+Y PL+
Sbjct: 84 AFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLN 142
Query: 363 SN--IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 536
+ I G + +L + + +P+F ++ +T
Sbjct: 143 TPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLT 202
Query: 537 AFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGH 683
+ A+ IL +D L T++F D G +L+ HLF FFGH
Sbjct: 203 VWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGH 262
Query: 684 PEVYILILPGFGIIS 728
PEVYI+ P G+++
Sbjct: 263 PEVYIVFFPALGVMA 277
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 63.3 bits (147), Expect = 7e-09
Identities = 43/125 (34%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +3
Query: 3 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 176
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 177 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 356
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKI 137
Query: 357 LSSNI 371
SS +
Sbjct: 138 CSSKM 142
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 312 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 434
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +3
Query: 498 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 677
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 678 GHPEVYILIL 707
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 81 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 254
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 255 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 347
NNI F +VE+GAGTG TV
Sbjct: 99 NNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 672 FFGHPEVYILILPGFGIISHIISQEEEKR 758
FFGHPEVYILILPGFG+ISHI++ K+
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKK 30
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 518 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 670
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 47.6 bits (108), Expect = 4e-04
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 659 TFILIFWTS*SLYFNFTRIWYNFSYYFTGR 748
+ ++IFW+S SLYFN IWYNF YY+T +
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSK 31
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 46.4 bits (105), Expect = 8e-04
Identities = 41/177 (23%), Positives = 65/177 (36%)
Frame = +3
Query: 207 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 386
L+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 180 LIPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSPTT-GGFQTGWWGYPPLAQN---SGS 235
Query: 387 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 566
+ + ++S S ++P+FV + A
Sbjct: 236 GIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPA 295
Query: 567 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 737
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 296 TYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 672 FFGHPEVYILILPGFGIISHI 734
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 44.8 bits (101), Expect = 0.003
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 687 EVYILILPGFGIISHIISQEEEKR 758
EVYILILPGFG+ISHIISQE K+
Sbjct: 155 EVYILILPGFGMISHIISQESGKK 178
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +2
Query: 245 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 424
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 425 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 604
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 605 LKY 613
KY
Sbjct: 199 PKY 201
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.51
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +3
Query: 381 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 560
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 561 XXXAGAITILLTDRNLNT 614
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 636 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQEEEKRNF 764
G DP+L + LF F GHP VY +LP + + + Q+ R F
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAGGRLF 266
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 6.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 642 DPILYQHLF*FFGHPEVYILILPGF 716
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 8.3
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +2
Query: 530 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 709
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 710 RI 715
I
Sbjct: 154 SI 155
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,985,209
Number of Sequences: 1657284
Number of extensions: 10673003
Number of successful extensions: 25758
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 23773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25486
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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