Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30403
         (651 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy...    36   0.005
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo...    32   0.083
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    32   0.083
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce...    31   0.11 
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom...    28   1.3  
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa...    27   1.8  
SPAC1B3.18c |mrps18||mitochondrial ribosomal protein subunit S18...    26   4.1  
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom...    25   7.2  

>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 559

 Score = 35.9 bits (79), Expect = 0.005
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = -1

Query: 399 RGTVXXXXXXXXXXXXFLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 220
           RGT              L  L F  + +V+G     + F G C+  A++  L++PETK R
Sbjct: 470 RGTAHGLSAALGKCGAILASLLFNFLTSVIGYGNVMWIFCG-CMWGAIFFTLLLPETKMR 528

Query: 219 RIDEI 205
             DEI
Sbjct: 529 DADEI 533


>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 572

 Score = 31.9 bits (69), Expect = 0.083
 Identities = 20/65 (30%), Positives = 27/65 (41%)
 Frame = -1

Query: 399 RGTVXXXXXXXXXXXXFLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 220
           RGT              L  L F  +  V+G     + F G C+   +   L++PETK R
Sbjct: 481 RGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMWIFCG-CMWGGILFTLLLPETKGR 539

Query: 219 RIDEI 205
             DEI
Sbjct: 540 DADEI 544


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 31.9 bits (69), Expect = 0.083
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = -1

Query: 399 RGTVXXXXXXXXXXXXFLQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKR 220
           RGT              L  L F  + +++G     + F G C+   +   L++PETK R
Sbjct: 482 RGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMWIFCG-CMWGGILFTLLLPETKGR 540

Query: 219 RIDEI 205
             DEI
Sbjct: 541 DADEI 545


>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 583

 Score = 31.5 bits (68), Expect = 0.11
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 348 LQMLFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L  L F  +  V+G     + F G C++    V L++PET  R  D I
Sbjct: 508 LSALLFNKLTEVIGFGNVLWIFFG-CMVAGAVVTLILPETANRDADLI 554


>SPBC3F6.05 |rga1||GTPase activating protein
           Rga1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1150

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = +3

Query: 366 TPPWWSPSPCRGTV----DTTRNFVRYRHSSDTAGTK 464
           TPP   P P R        TT+NF   RH+S  AGT+
Sbjct: 21  TPPKRIPVPSRQNKIEENSTTKNFPHSRHTSTVAGTE 57


>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
           Ght7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 518

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 336 FFKP-VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           FF P + N +G +   Y F    L  A  + L V ETK R ++EI
Sbjct: 390 FFTPFITNSIG-FKYGYIFASCNLTGAAIIFLFVHETKGRTLEEI 433


>SPAC1B3.18c |mrps18||mitochondrial ribosomal protein subunit
           S18|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 223

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = +2

Query: 134 WIDFLSMTIFFSSNFSFLVFKSS*ISSIRLFFV 232
           +I F   +IFFSS   FLV+KS  + S +LFF+
Sbjct: 14  FISFTFSSIFFSSLILFLVYKS--VLS-KLFFI 43


>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 535

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 336 FFKP-VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           FF P ++N +G +   Y F    L  A+ + L   ETK   ++EI
Sbjct: 422 FFTPFISNSIG-FKYGYVFAACNLCAAIIIFLFAKETKGLTLEEI 465


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,847,267
Number of Sequences: 5004
Number of extensions: 28137
Number of successful extensions: 68
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)