Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30403
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical ...    40   0.002
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    32   0.31 
AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical ...    31   0.54 
AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical ...    31   0.54 
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    29   2.9  
AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical ...    29   2.9  
AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical ...    29   3.8  
U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned expre...    28   5.0  
U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned expre...    28   5.0  
U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned expre...    28   5.0  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AL021497-2|CAA16400.1|  606|Caenorhabditis elegans Hypothetical
           protein Y51A2D.4 protein.
          Length = 606

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = -1

Query: 339 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L +  +  V+G Y AF+ + G+ ++  ++++ +VPETK   I+E+
Sbjct: 519 LTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEV 563


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 339 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L F  ++     Y  F+ + G  ++  ++V   VPETK   IDE+
Sbjct: 523 LTFLSLSQAATKYGTFFIYCGCTMVALVFVFFFVPETKGYSIDEV 567


>AF040646-6|AAK31540.1|  510|Caenorhabditis elegans Hypothetical
           protein H17B01.1b protein.
          Length = 510

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 339 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L F P+ N++  Y+ F+ F G       Y    VPETK + I++I
Sbjct: 459 LTFLPINNLMQQYS-FFIFSGFLAFFIFYTWKFVPETKGKSIEQI 502


>AF040646-5|AAK31539.1|  492|Caenorhabditis elegans Hypothetical
           protein H17B01.1a protein.
          Length = 492

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 339 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L F P+ N++  Y+ F+ F G       Y    VPETK + I++I
Sbjct: 441 LTFLPINNLMQQYS-FFIFSGFLAFFIFYTWKFVPETKGKSIEQI 484


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 282 RRSRKPHRAPPRSRLA*RTASAGRQRTRTPPW 377
           R SR   R+PPR R   R+ S  R RT    W
Sbjct: 345 RHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNW 376


>AL021497-3|CAA16405.1|  613|Caenorhabditis elegans Hypothetical
           protein Y51A2D.5 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/45 (24%), Positives = 24/45 (53%)
 Frame = -1

Query: 339 LFFKPVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           L +  + + +  Y AF+ +    ++  +++  +VPET    IDE+
Sbjct: 527 LTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEV 571


>AC006627-3|AAK85461.1|  504|Caenorhabditis elegans Hypothetical
           protein E01A2.4 protein.
          Length = 504

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +3

Query: 282 RRSRKPHRAPPRSRLA*RTASAGRQRTRTPP---WWSPSPCR 398
           +R R+P RAP  S    R   + R+R+R+PP     SPSP R
Sbjct: 78  KRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPPR 119


>U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned
           expression site protein22, isoform c protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 324 VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRID 211
           V ++ G Y   ++FGG+ LL A  +   +P   K+  D
Sbjct: 660 VYDITGSYDTAFYFGGLVLLVAGLISATIPFVTKKDAD 697


>U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned
           expression site protein22, isoform a protein.
          Length = 677

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 324 VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRID 211
           V ++ G Y   ++FGG+ LL A  +   +P   K+  D
Sbjct: 605 VYDITGSYDTAFYFGGLVLLVAGLISATIPFVTKKDAD 642


>U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned
           expression site protein22, isoform b protein.
          Length = 777

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 324 VANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRID 211
           V ++ G Y   ++FGG+ LL A  +   +P   K+  D
Sbjct: 660 VYDITGSYDTAFYFGGLVLLVAGLISATIPFVTKKDAD 697


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 327 PVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           P+ +V+G YA    +     ++ L +   +PETK R I +I
Sbjct: 425 PLYSVIGSYAFLILYSIPSFISMLILFRYLPETKGREIHDI 465


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 327 PVANVVGLYAAFYFFGGVCLLTALYVVLVVPETKKRRIDEI 205
           P+ +V+G YA    +     ++ L +   +PETK R I +I
Sbjct: 425 PLYSVIGSYAFLILYSIPSFISMLILFRYLPETKGREIHDI 465


>Z75539-1|CAA99843.1|  672|Caenorhabditis elegans Hypothetical
           protein F28C1.1 protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 19/55 (34%), Positives = 26/55 (47%)
 Frame = +3

Query: 285 RSRKPHRAPPRSRLA*RTASAGRQRTRTPPWWSPSPCRGTVDTTRNFVRYRHSSD 449
           RSR   R+PPR R   R+ +  R+R R       S  R     +R+  R R+S D
Sbjct: 404 RSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRDRRRYSPD 458


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,388,428
Number of Sequences: 27780
Number of extensions: 169068
Number of successful extensions: 654
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)