Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30402
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    31   0.63 
Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical pr...    31   0.83 
L10986-3|AAA28018.1|  650|Caenorhabditis elegans Abnormal cell m...    31   1.1  
AL032631-14|CAA21578.1|  243|Caenorhabditis elegans Hypothetical...    30   1.9  
AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical...    29   4.4  
AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81147-7|CAB03536.1|  459|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z92838-9|CAD30449.1|  549|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z92838-8|CAB07407.1|  401|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z92838-7|CAB07405.1|  593|Caenorhabditis elegans Hypothetical pr...    28   7.7  
Z70287-7|CAA94303.2|  198|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical...    28   7.7  
AF286206-1|AAK28741.1|  549|Caenorhabditis elegans C kinase adap...    28   7.7  
AF286205-1|AAK28740.1|  593|Caenorhabditis elegans C kinase adap...    28   7.7  
AF016686-10|AAB66243.1|  172|Caenorhabditis elegans Hypothetical...    28   7.7  
AF000263-19|AAG00021.1|  321|Caenorhabditis elegans Collagen pro...    28   7.7  
AC006685-5|AAK84575.1|  254|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006677-9|AAF39947.1|  344|Caenorhabditis elegans Serpentine re...    28   7.7  

>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
           protein F36H2.3 protein.
          Length = 1388

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 335 TPLSSSCNMLGDKPKG-FSFGINTATST-INSIP 430
           TP SSSC +    P G   +  N ATST INS+P
Sbjct: 271 TPTSSSCRVPSSTPNGNIVYSANVATSTSINSVP 304


>Z78414-1|CAB01669.2|  472|Caenorhabditis elegans Hypothetical
           protein W09D12.1 protein.
          Length = 472

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -3

Query: 339 GVVENGLDGSNLNIDDPDTVRSLLDSEKIPFFDFSTGFFVSE 214
           GVV  G+ G+N +I  P+  + L+D  K+  F F  G+ + E
Sbjct: 11  GVVSAGIPGTNGDIRQPNFQKELMDEAKVYLFKF--GYMIPE 50


>L10986-3|AAA28018.1|  650|Caenorhabditis elegans Abnormal cell
           migration protein10, isoform b protein.
          Length = 650

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
 Frame = +2

Query: 119 FRDYEAYLKEIQEEYHGPDGDCSEIET-KKNVNSET-KNPVEKSKNGIFSESSRDLTVSG 292
           FR YE Y+K+ Q      D    E+E  +  +NS    + +    +GI + SSR+   S 
Sbjct: 10  FRQYETYMKQKQSADWQLDELLEELEALETQLNSSNGGDQLLLGVSGIPASSSRENVKSI 69

Query: 293 SSIFKLDPSKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINS 424
           S++    P+  +  TP         +   G+  GI+  TS INS
Sbjct: 70  STLPPPPPALSYHQTPQQPQLLHHHNNHLGYQNGIHQITS-INS 112


>AL032631-14|CAA21578.1|  243|Caenorhabditis elegans Hypothetical
           protein Y106G6H.15 protein.
          Length = 243

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 540 EPSEDGLDFNPKEKVFDVCILLEFVDEVPKENPVLIAGMLFIVLVAVFIPKENPFGLSPS 361
           EP+E GL   PKE   D+ I+ +  DE  K  P    G L + ++   + K + F +  S
Sbjct: 105 EPNEQGLSSKPKEN--DIRIVPQITDEEFKTIPKYQLGRLTLEMMNEIVSKMDDFLMKKS 162


>AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +2

Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK--KNVNSETKNPVEKSKNGIFSESSRDLTVS 289
           +F DYE   K++Q  +H  +  C  I+TK  K   +  K   +  +N I   S      S
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSS 235

Query: 290 G 292
           G
Sbjct: 236 G 236


>AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +2

Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK--KNVNSETKNPVEKSKNGIFSESSRDLTVS 289
           +F DYE   K++Q  +H  +  C  I+TK  K   +  K   +  +N I   S      S
Sbjct: 176 VFEDYEFIEKQVQMSWHPDNVFCFVIDTKSSKEFKTNMKKLADCFENIIVLPSKHSFDSS 235

Query: 290 G 292
           G
Sbjct: 236 G 236


>AC024824-1|AAK85503.1|  679|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.3 protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 143 KEIQEEYHGPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRD 277
           KE  EE    D +   +E KKN  S  K P + +      ESS D
Sbjct: 328 KESDEEQQASDSEEEVVEVKKNSKSPKKTPKKTAVKEESEESSGD 372


>Z81147-7|CAB03536.1|  459|Caenorhabditis elegans Hypothetical
           protein T09E11.9 protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 116 IFRDYEAYLKEIQEEYHGPDGDCSEIETK 202
           +++DYE   K++Q  YH  +  C  I+ K
Sbjct: 152 VYKDYELVEKQVQMSYHPQNSFCFAIDKK 180


>Z92838-9|CAD30449.1|  549|Caenorhabditis elegans Hypothetical
           protein T03D8.1c protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
           E+P GL  +P ++ +    +  NGLDG NLN
Sbjct: 342 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 372


>Z92838-8|CAB07407.1|  401|Caenorhabditis elegans Hypothetical
           protein T03D8.1b protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
           E+P GL  +P ++ +    +  NGLDG NLN
Sbjct: 194 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 224


>Z92838-7|CAB07405.1|  593|Caenorhabditis elegans Hypothetical
           protein T03D8.1a protein.
          Length = 593

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
           E+P GL  +P ++ +    +  NGLDG NLN
Sbjct: 386 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 416


>Z70287-7|CAA94303.2|  198|Caenorhabditis elegans Hypothetical
           protein R09E10.2 protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 230 PVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTP 340
           P+EK K G +S    +L V   + ++L PSK     P
Sbjct: 107 PLEKKKKGKYSSEYANLLVEKPTRYRLVPSKNVKVVP 143


>AL132860-16|CAB60516.1|  497|Caenorhabditis elegans Hypothetical
           protein Y56A3A.17b protein.
          Length = 497

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
 Frame = +2

Query: 167 GPDGDCSEIETKKNVNSETKNPVEKSKNGIFSESSRDLTVSG----------SSIFKLDP 316
           G DGD  +   K +  S  K P E S+    ++S+  LT             SS+F   P
Sbjct: 230 GKDGDKPKETPKFSGFSFGKKPAEPSEEPKAADSTPKLTFGSPKEADLPKPASSLFGASP 289

Query: 317 SKPFSTTPLSSSCNMLGDKPKGFSFGINTATSTINSIPA 433
           SKP       SS +     PK FS  ++TA S   S  A
Sbjct: 290 SKPLVFG--GSSADSTTSAPKPFS-ALSTAASLFGSSSA 325


>AF286206-1|AAK28741.1|  549|Caenorhabditis elegans C kinase adapter
           1s protein.
          Length = 549

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
           E+P GL  +P ++ +    +  NGLDG NLN
Sbjct: 342 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 372


>AF286205-1|AAK28740.1|  593|Caenorhabditis elegans C kinase adapter
           1 protein.
          Length = 593

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 387 ENPFGL--SPSILQELLNGVVENGLDGSNLN 301
           E+P GL  +P ++ +    +  NGLDG NLN
Sbjct: 386 EDPLGLGITPPVVTKTSGSLSNNGLDGINLN 416


>AF016686-10|AAB66243.1|  172|Caenorhabditis elegans Hypothetical
           protein R07C3.14 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -1

Query: 200 LSQFQSNHHLVHDTLPVFLLNMLHSL*I*VLRCIKVFHPHVF*SNLIEIHSSLSI*HNIL 21
           +  FQ+  +LV DTL ++  N+  +L         +FHP  F    + I  +L I H I+
Sbjct: 26  IDAFQNARNLVTDTLEIYTGNLRETL----ESLPSIFHPSTFPLKALRILRNLHIKHPII 81


>AF000263-19|AAG00021.1|  321|Caenorhabditis elegans Collagen
           protein 56 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 561 GAPNLRGEPSEDGL---DFNPKEKVFDVCIL 478
           G P L GEP  DGL   D+N  E + + CIL
Sbjct: 108 GKPGLDGEPGFDGLPGRDYNYMELMTEHCIL 138


>AC006685-5|AAK84575.1|  254|Caenorhabditis elegans Hypothetical
           protein T13G4.6 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 182 CS-EIETKKN-VNSETKNPVEKSKNGIFSESSRDLTVSGSSIFKLDPSKPFSTTPLSS 349
           CS +I T+++ V S  ++P+E+ +  I   + +D+ +     F L P   F+TT  SS
Sbjct: 152 CSWQIITRRSMVPSTQRHPMERLRTRIIRRNPQDINLEAILKFSLCPPILFTTTIFSS 209


>AC006677-9|AAF39947.1|  344|Caenorhabditis elegans Serpentine
           receptor, class h protein56 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 294 DPDTVRSLLDSEKIPFFDFSTGF-FVSELTFFFV 196
           DP T   L   E +PF+  + GF FV   TFFF+
Sbjct: 190 DPKTYVLLQGGEVLPFWSITIGFGFVIFQTFFFL 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,971,802
Number of Sequences: 27780
Number of extensions: 312292
Number of successful extensions: 1556
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)