Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30400
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.18 
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   4.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   5.2  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   6.9  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   6.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.9  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    23   6.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 493  RELSTGRPARARPWP-SVRRGSTRRFSASREPYGHSASKGSRRTARRWRAGS 645
            R  S G  +R+R    S   GS +  S SR   G  AS+GSRR+  R R+ S
Sbjct: 1120 RSGSGGSRSRSRSRSRSQSAGSRKSGSRSRSRSGSQASRGSRRSRSRSRSRS 1171


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 452 VCYENLLFRINDTLFDYFNGFSVEKSFT 369
           V Y NLL+     L  Y +GF  +KS T
Sbjct: 18  VIYNNLLYACRSYLSPYQHGFVPKKSTT 45


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 600 CRMPVWLARSRKPASRSTPNAWPRSGP 520
           CR P    RSR     + P +WPRS P
Sbjct: 271 CRSPPARRRSRS----TRPTSWPRSRP 293


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 272 STLRIWVSPPVTTRNLIPT 216
           +T  +W+ P  TT   +PT
Sbjct: 216 TTTTVWIDPTATTTTHVPT 234


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 272 STLRIWVSPPVTTRNLIPT 216
           +T  +W+ P  TT   +PT
Sbjct: 217 TTTTVWIDPTATTTTHVPT 235


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 582 LARSRKPASRSTPNAWPRSGPGRPTCTQLSQLHS 481
           +A +   AS STP   P + P     T LSQ ++
Sbjct: 156 VAAAAAGASASTPPTIPSASPSPTRSTDLSQTYA 189


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 502  STGRPARARPWPSVRRGSTRRFSA-SREPYGHSASKGSRRTARRWRAGS 645
            ++ +PA+ +P P +RR +    S  S  PYG   S+G  R    + AG+
Sbjct: 1123 NSAKPAQ-QP-PPLRRDARELASMRSFSPYGADVSRGDHRGGAAFYAGA 1169


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 435 KILVTYTRNLGYTKVMSVVERVEY 506
           K+  + T+N  YTK  S ++R +Y
Sbjct: 35  KVFRSMTQNFDYTKKPSYLQRAKY 58


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 452 VCYENLLFRINDTLFDYFNGFSVEKSFT 369
           V Y+NLL      L  Y +GF  +KS T
Sbjct: 633 VIYKNLLHACRSYLSPYQHGFVPKKSTT 660


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,389
Number of Sequences: 2352
Number of extensions: 15774
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)