Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30400
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   2.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   6.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   8.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.4  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 195 FRNISSFYRLDFNAFYFN 142
           FRNIS  Y+  FN ++ N
Sbjct: 112 FRNISEKYQEIFNGYFLN 129


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 643 NPLAICEQFFLNLSMPNAR 587
           NP+   E++FLNL++ N R
Sbjct: 403 NPVKGFEEYFLNLTVENNR 421


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 591 PVWLARSRKPASRSTPNAWPRSGPG 517
           PV++++ R P  R    A P + PG
Sbjct: 102 PVYISQPRPPHPRLRREAEPEAEPG 126



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 591 PVWLARSRKPASRSTPNAWPRSGPG 517
           PV++++ R P  R    A P + PG
Sbjct: 158 PVYISQPRPPHPRLRREAEPEAEPG 182


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 591 PVWLARSRKPASRSTPNAWPRSGPG 517
           P+++ + R P  R    A P++ PG
Sbjct: 47  PIYIPQPRPPHPRLRREAEPKAEPG 71


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 365 FWNSVGFSQEPLCIKTTV 312
           FWNS+ F++  L    T+
Sbjct: 546 FWNSINFNENKLHTSDTL 563


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 365 FWNSVGFSQEPLCIKTTV 312
           FWNS+ F++  L    T+
Sbjct: 546 FWNSINFNENKLHTSDTL 563


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,121
Number of Sequences: 438
Number of extensions: 4417
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)