Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30399
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    75   8e-16
U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.           25   0.64 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   1.5  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   3.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 74.5 bits (175), Expect = 8e-16
 Identities = 39/140 (27%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
 Frame = +2

Query: 314 SRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRG-TGNT 490
           SRE     E+ RR+K+ +YI EL+ +VP  +  A++ DK +ILR+A  H++  +      
Sbjct: 29  SREMRNRAEKMRRDKLNSYIGELATLVPMVARSAKRMDKTSILRLAATHLRIYQTLLSGK 88

Query: 491 STDGTYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSC 670
           +      P  +    L+ L+ E   GFL +++   G+I++VS ++  +L + Q +     
Sbjct: 89  NHPHIQLPKHVDQYLLEQLVCEQLGGFLLILT-PNGKIVFVSHTVEHLLGHLQTDLMGQS 147

Query: 671 LYDQVHPDDVEKVREQLSTQ 730
           +++   PDD +++R  ++T+
Sbjct: 148 IFNITSPDDHDRLRMYINTE 167


>U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.
          Length = 45

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 338 ERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMA 451
           ERRR N +      L D+VP+     RK  K   L+MA
Sbjct: 6   ERRRMNSLNDAFDRLRDVVPSLGN-DRKLSKFETLQMA 42


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 323 FHDLQNAPCLEYCPPPSLCIFHHFRRLH 240
           FH    +  L Y PPP +   HH+ R H
Sbjct: 151 FHAAATSLPLHYPPPPPV-YTHHYARYH 177


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 344 DVQSRNDFHDLQNAPCLEYCPPPSLCIF 261
           D+ ++  + DLQN   LE C   SL ++
Sbjct: 32  DIHAKPTYSDLQNLKYLERCIKESLRLY 59


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 344 DVQSRNDFHDLQNAPCLEYCPPPSLCIF 261
           D+  +  ++DLQN   LE C   +L ++
Sbjct: 32  DLSKKPSYNDLQNLKYLERCIKETLRLY 59


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 406 RTRPEARQANHTAYGSSSHESIKRHWQY 489
           RT+P A +   TAY S+    ++R + +
Sbjct: 82  RTKPTAGKRARTAYTSAQLVELEREFHH 109


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 533 ELKHLILEAADGFLFVVSCDTGRIIY 610
           +L   +  A  GFLF++ CD+   IY
Sbjct: 4   QLTACVGSAIAGFLFLLICDSYLKIY 29


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/33 (33%), Positives = 12/33 (36%)
 Frame = -2

Query: 278 PSLCIFHHFRRLHLIQHCQHGVFVNPLLGQPRG 180
           P L   HH   L+   H  H   VNP      G
Sbjct: 34  PGLQGLHHSPHLNHAMHPYHANHVNPTANHVMG 66


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 406 RTRPEARQANHTAYGSSSHESIKRHWQY 489
           RT+P A +   TAY S+    ++R + +
Sbjct: 73  RTKPTAGKRARTAYTSAQLVELEREFHH 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,316
Number of Sequences: 336
Number of extensions: 4042
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)