Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30399
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    71   5e-14
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.7  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   10.0 
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   10.0 
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   10.0 
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   10.0 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   10.0 

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 70.5 bits (165), Expect = 5e-14
 Identities = 43/135 (31%), Positives = 67/135 (49%)
 Frame = +2

Query: 317 RENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNTST 496
           RE     E+ RR+K+   I ELS MVP  +   R+ DK  +LR +   ++     G +  
Sbjct: 224 REARNRAEKNRRDKLNGSIQELSAMVPHVAESPRRVDKTAVLRFSAHGLRVDYVFGKSKP 283

Query: 497 DGTYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSCLY 676
           + T KP      E +  +    +GFL  V+C  G+I+ VS S+   L + Q + Y   L+
Sbjct: 284 EETVKP------EAQDSLFRMLNGFLLTVTC-RGQIVLVSPSVEQFLGHCQTDLYGQNLF 336

Query: 677 DQVHPDDVEKVREQL 721
              HPDD   +++QL
Sbjct: 337 TLTHPDDHALLKQQL 351


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/50 (24%), Positives = 28/50 (56%)
 Frame = +3

Query: 180 SPGLTQQRIYKNAVLAVLDQMKTTEVVENTQGWRRTIFKTRSVLQVVKII 329
           +PG   +R+  + +  V++  ++  + EN  G+RR     RS +Q ++++
Sbjct: 504 NPGKVYERLLLSRINDVIEDPESPRLAENQYGFRR----GRSTVQAIQLV 549


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 600  RPVSQLTTNKKPSAASKI 547
            RP S L  +K PSAASK+
Sbjct: 2945 RPESTLIFDKLPSAASKV 2962


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 365 PSSCSSCDVQSRNDFHDLQNAPC 297
           P+ CSS +   R   H++ N PC
Sbjct: 66  PALCSSYEDCIRCAVHEINNIPC 88


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 365 PSSCSSCDVQSRNDFHDLQNAPC 297
           P+ CSS +   R   H++ N PC
Sbjct: 66  PALCSSYEDCIRCAVHEINNIPC 88


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 365 PSSCSSCDVQSRNDFHDLQNAPC 297
           P+ CSS +   R   H++ N PC
Sbjct: 66  PALCSSYEDCIRCAVHEINNIPC 88


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 365 PSSCSSCDVQSRNDFHDLQNAPC 297
           P+ CSS +   R   H++ N PC
Sbjct: 66  PALCSSYEDCIRCAVHEINNIPC 88


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 365 PSSCSSCDVQSRNDFHDLQNAPC 297
           P+ CSS +   R   H++ N PC
Sbjct: 642 PALCSSYEDCIRCAVHEINNIPC 664


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,963
Number of Sequences: 2352
Number of extensions: 15677
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)