Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30399
(744 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 51 1e-08
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 44 1e-06
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 25 0.99
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 1.7
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 4.0
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 5.3
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 22 7.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 7.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 7.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 51.2 bits (117), Expect = 1e-08
Identities = 35/110 (31%), Positives = 50/110 (45%)
Frame = +2
Query: 392 VPTCSALARKPDKLTILRMAVAHMKALRGTGNTSTDGTYKPSFLTDQELKHLILEAADGF 571
VPT S L +KPD T+ V G+T TD + T+ L I +A +GF
Sbjct: 108 VPTKSILEKKPDVTTV--ELVDATDPGEHNGDTVTDVEAGLASRTNP-LDDSISQANEGF 164
Query: 572 LFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSCLYDQVHPDDVEKVREQL 721
V+S G ++Y + SI L Y + W D VHP D + +Q+
Sbjct: 165 CAVISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYVHPKDKATLADQI 214
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/40 (20%), Positives = 17/40 (42%)
Frame = +2
Query: 608 YVSDSIAPVLNYSQGEWYSSCLYDQVHPDDVEKVREQLST 727
+V + Y + L+D HP+D+ +++ T
Sbjct: 322 HVDPDVVQYFGYLPQDMVGRSLFDFYHPEDLPFIKDIYET 361
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 44.4 bits (100), Expect = 1e-06
Identities = 32/110 (29%), Positives = 48/110 (43%)
Frame = +2
Query: 392 VPTCSALARKPDKLTILRMAVAHMKALRGTGNTSTDGTYKPSFLTDQELKHLILEAADGF 571
VPT S L +KP+ + G+T TD + T+ L I +A +GF
Sbjct: 108 VPTKSILEKKPELVDATDPG-------EHNGDTVTDVEAGLASRTNP-LDDSISQANEGF 159
Query: 572 LFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSCLYDQVHPDDVEKVREQL 721
V+S G ++Y + SI L Y + W D VHP D + +Q+
Sbjct: 160 CAVISMHDGLVLYTTPSICTALGYLKDAWIGRSFIDYVHPKDKATLADQI 209
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 24.6 bits (51), Expect = 0.99
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 299 KERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKAL 472
K+ SR H E+E+ RR + + +L +VP +R L +L A +K+L
Sbjct: 44 KKSQGSRTTHNELEKNRRAHLRNCLEKLKVLVPLGPETSRH-TTLGLLTKAKRFIKSL 100
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -3
Query: 349 PATFNLAMIFTTCKTLLVLNIVLLHPCVFSTTSVV 245
P +NL M+ V + ++PC+F ++V
Sbjct: 210 PIYYNLTMVKLNWPKKRVTKMSSINPCIFDNATIV 244
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 222 ARRFCKSFAGSAPGIVGATADIGQQTHY 139
ARRF ++ A GIVG +Q Y
Sbjct: 400 ARRFLNNYLFLAVGIVGGACSDVEQNFY 427
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 22.2 bits (45), Expect = 5.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 299 KERFASRENHCE--IERRRRNK-MTAYITELSDMVPTCSALARKPDK 430
+E +A C+ I+ R+ K + A ITE ++PT + +AR D+
Sbjct: 358 EETYALAPAGCDLTIDNLRKAKYLRACITESLRLIPTTTCIARILDE 404
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 99 ITINLKEIKT*TNGNESVDRC 161
I+I++K + N N+S D+C
Sbjct: 108 ISIDVKMLSECINANKSTDKC 128
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 3 CNGKWRLCRVKY 38
CNG WR R+ Y
Sbjct: 55 CNGLWRWIRLTY 66
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 3 CNGKWRLCRVKY 38
CNG WR R+ Y
Sbjct: 93 CNGLWRWIRLTY 104
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/40 (20%), Positives = 17/40 (42%)
Frame = +2
Query: 608 YVSDSIAPVLNYSQGEWYSSCLYDQVHPDDVEKVREQLST 727
+V + Y + L+D HP+D+ +++ T
Sbjct: 28 HVDPDVVQYFGYLPQDMVGRSLFDFYHPEDLPFIKDIYET 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,312
Number of Sequences: 438
Number of extensions: 4451
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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