Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30394
(740 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023) 97 1e-20
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 65 5e-11
SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10) 60 1e-09
SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0) 60 1e-09
SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08) 57 2e-08
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0) 54 1e-07
SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 50 1e-06
SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 47 1e-05
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 47 1e-05
SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13) 44 1e-04
SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09) 44 1e-04
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 44 1e-04
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_32820| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_54496| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09) 41 0.001
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 39 0.005
SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0) 38 0.006
SB_31669| Best HMM Match : RepL (HMM E-Value=5.7) 36 0.026
SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0) 36 0.046
SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44) 36 0.046
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0) 34 0.14
SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0) 32 0.56
SB_48195| Best HMM Match : DUF229 (HMM E-Value=0) 31 0.74
SB_43676| Best HMM Match : Ion_trans (HMM E-Value=1.2e-39) 31 0.98
SB_17466| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_50102| Best HMM Match : Phage_fiber (HMM E-Value=8.2e-06) 29 3.0
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 29 5.2
SB_55652| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 28 9.1
SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023)
Length = 277
Score = 97.1 bits (231), Expect = 1e-20
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Frame = +1
Query: 67 GYGTTETQGFIAVTDRDAEASSNGWVYNILHYKLID-DNGAEVGPGSNGELYVKGECVVK 243
GYG TE + + +S G V K++D G G GE+ +KG ++K
Sbjct: 67 GYGLTEFCVALIGRKNLKKPASVGEVLPCSQVKVVDLKTGVAQPAGKQGEICIKGPLMMK 126
Query: 244 GYYKNKEAYSESFV-DGWYKTGDWFHLDENERLHFLERRKFNFKFRGCHVSPEEVEGVIG 420
GY N EA + + +GW TGD + D+ E + + R K K++G V P E+E ++
Sbjct: 127 GYLNNPEATANTIDHEGWLHTGDIGYYDDQEHFYIVGRVKELIKYKGFQVPPAELEDLLQ 186
Query: 421 KLPGVHESVVVATDNG-----PAAAVVLLL-EYDLTREDINKAVDSTLSDHKRLHGGIAF 582
P + ++ V+ + P A VVL T +DI + V +S KRL GG+
Sbjct: 187 SHPDIADAAVIGVPDEEAGELPKAFVVLKAGTLGTTPQDIIQFVSENISPQKRLRGGVEI 246
Query: 583 VDSLPHTHSGKLKRMECKK 639
VDS+P T SGK+ R + ++
Sbjct: 247 VDSIPKTPSGKILRRQLRE 265
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 65.3 bits (152), Expect = 5e-11
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +1
Query: 64 NGYGTTETQGFIAVTDRDA-EASSNGWVYNILHYKLID-DNGAEVGPGSNGELYVKGECV 237
+ YG TE V D S G + L K+ID +G EV G GE+ ++G V
Sbjct: 182 SSYGMTELSPVSHVVPLDTYNPKSVGVLLPNLECKIIDLSSGEEVEQGKEGEICIRGPTV 241
Query: 238 VKGYYKNKEAYSESF-VDGWYKTGDWFHLDENERLHFLERRKFNFKFRGCHVS 393
+KGY KN EA + + +GW TGD H D+ + + +R K K++G VS
Sbjct: 242 MKGYLKNPEATARTLDSEGWLHTGDIGHCDQGDFFYITDRLKELIKYKGFQVS 294
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATDNGPAA----AVVLLLEYDL 507
+ +R K K++G V P E+E ++ P V + V+ + A A V+ + L
Sbjct: 776 YITDRLKELIKYKGFQVPPAELEALLLSHPDVEDVAVIGVPDVEAGELPKAFVVRKKESL 835
Query: 508 TREDINKAVDSTLSDHKRLHGGIAFVDSLPHTHSGKL 618
T ED+ V+S ++ +KRL GG+ F D +P + SGK+
Sbjct: 836 TVEDVTGFVNSRVAPYKRLRGGVEFTDEIPKSTSGKI 872
>SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10)
Length = 418
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +1
Query: 46 PDTHLCNGYGTTE-TQGFIAVTDRDAEASSNGWVYNI---LHYKLIDDNGAEVGPGSNGE 213
PD + N YG+TE Q I +D + + ++ + K++DD G V G GE
Sbjct: 192 PDITVRNSYGSTEGCQHAITTYTKDTISICDYGKMSVFPGVEAKVVDDEGKMVKRGVAGE 251
Query: 214 LYVKGECVVKGYYKNKEAYSES-FVDGWYKTGDWFHLDENERLHFLERRKFNFKFRGCHV 390
+ V+ V + Y N E+ + + GWY TGD +D++ R+ L R+K K +
Sbjct: 252 MCVRSAWVFREYLGNPESTRRAKSLTGWYHTGDICQMDKDGRIEVLGRKKDFLKRATVKI 311
Query: 391 SPEEVEGVIGKLPGVHESVVV 453
P E+E V + P V + VV
Sbjct: 312 FPAELERVFQEHPDVLDVAVV 332
>SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 566
Score = 60.5 bits (140), Expect = 1e-09
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Frame = +1
Query: 7 TPDLVKEFKEKLHPDTHLCNGYGTTE-----TQGFIAVTDRDAEASSNGWVYNILHYKLI 171
TPD + + E L P + + YG +E T+ I +D + + + K+I
Sbjct: 330 TPDEIVKTMEAL-PGANALHIYGASEAMKIATRFIIRSALQDKASLCKLTLSPGVELKII 388
Query: 172 DDNGAEVGPGSNGELYVKGECVVKGYYKNKEAYSE-SFVDGWYKTGDWFHLDENERLHFL 348
DD G V G GE+ V+ ECV GY +E + DGW + GD +DE RL L
Sbjct: 389 DDKGCLVPRGEMGEICVRNECVFMGYLGQEETTKKVKSPDGWIRMGDLGVMDEEGRLQVL 448
Query: 349 ERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
R+ K + P E+E + + P + +VV+
Sbjct: 449 GRKVEVIKKASVKIVPGEIEASLMQHPLLARAVVI 483
>SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = +1
Query: 172 DDNGAEVGPGSN---GELYVKGECVVKGYYKNKEAYSESFV-DGWYKTGDWFHLDENERL 339
D+ G+ V GS G L+V+G V KGY+ EA ESF DGW+ TGD L +
Sbjct: 48 DEQGSRVLDGSKSAEGILHVRGPSVFKGYWNRPEATKESFTEDGWFITGDTARLSDGV-Y 106
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATDN---GPAAAVVLLLEYD-- 504
+ R K G +S EVE + + P V + V+ + G A ++ L +
Sbjct: 107 RIIGRPWDIIKSGGYKISALEVERELRQHPDVKDCAVLGIPDPEWGERVAAIVALNDNSA 166
Query: 505 LTREDINKAVDSTLSDHKRLHGGIAFVDSLPHTHSGKLKRME 630
LT ED+ +A S + + V+ LP GK+ + E
Sbjct: 167 LTLEDL-RAWGSDHMVRYHIPAALHIVEELPRNVMGKVNKKE 207
>SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08)
Length = 224
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +1
Query: 67 GYGTTETQGFIAVTDRDAEASSNGWVYNIL---HYKLID-DNGAEVGPGSNGELYVKGEC 234
GYG TE V D +G V +L K+ D D G +GP GE+ ++G
Sbjct: 113 GYGLTEATAGAIVNPIDPTKCKDGSVGVLLPNLEGKVTDLDTGEALGPNQEGEICLRGPI 172
Query: 235 VVKGYYKNKEAYSESFV-DGWYKTGDWFHLDENERLHFLERRKFNFKFRG 381
V GY E + +F DGW +TGD + D + + +R K K++G
Sbjct: 173 VTHGYLNKPEQTANTFTSDGWLRTGDIGYYDTEDYFYITDRLKELIKYKG 222
>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 569
Score = 54.0 bits (124), Expect = 1e-07
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Frame = +1
Query: 46 PD-THLCNGYGTTET---QGFIAVTDRDAEASSNGW--VYNILHYKLIDDNGAEVGPGSN 207
PD T + N YG+TET G + VT + + G V K++DD G V G+
Sbjct: 334 PDLTSIVNSYGSTETFLPSGQV-VTRHNIHSLDYGATEVNPGFEVKVVDDEGHVVPVGTP 392
Query: 208 GELYVKGECVVK---GYYKNKEAYSESFVDGWYKTGDWFHLDENERLHFLERRKFNFKFR 378
GEL+V+G +++ G Y E GWY + D + + R+ L R+ K
Sbjct: 393 GELHVRGAGILQSANGVRMEGVVYEEKTPTGWYPSKDLSKITNDGRVRILGRKDCLIKSA 452
Query: 379 GCHVSPEEVEGVIGK 423
+ P EVE V+GK
Sbjct: 453 TESIYPPEVESVLGK 467
>SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 52.4 bits (120), Expect = 4e-07
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Frame = +1
Query: 46 PDTHLCNGYGTTETQGF-IAVTDRDAEASSNG---WVYNILHYKLIDDNGAEVGPGSNGE 213
P ++ GY ++E + ++D + S+ V+ + K++D +G V G GE
Sbjct: 4 PAAYIFQGYASSEGLKISFRLLNKDIQEKSSVAKMQVFAGVEVKIVDTDGKVVPRGQPGE 63
Query: 214 LYVKGECVVKGYYKNKEAYSE-SFVDGWYKTGDWFHLDENERLHFLERRKFNFKFRGCHV 390
+ + ECV GY N EA S GW T D +D+ + + R+ K +
Sbjct: 64 ICCRSECVFLGYLGNPEATSRVKSPQGWLHTEDLGTMDDQDMIEVTGRKSEIIKRATVKI 123
Query: 391 SPEEVEGVIGKLPGVHESVVV 453
P E+ + K P V +++V+
Sbjct: 124 FPGEIRAELVKNPIVADTIVI 144
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 50.4 bits (115), Expect = 1e-06
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Frame = +1
Query: 58 LCNGYGTTETQGFIAVTD-RDAEASSNGWVYNILHYKLIDDNGAEVGPGSNGELYVKGEC 234
L N YG TET + + + + G + + ++D +V GEL + G+C
Sbjct: 317 LINSYGPTETTVVATTCEIKRGKKITIGRAFGNYNAHILDSILVDVEGEKEGELCISGKC 376
Query: 235 VVKGYYKNKEAYSESFVDGW-----YKTGDWFHLDENERLHFLERRKFNFKFRGCHVSPE 399
+ +GY E + FVD Y+TGD + + +L R K RG V
Sbjct: 377 LARGYRNLPEKTKQQFVDHQLHGRIYRTGDLVRWTPDGEIEYLGRIDDQVKIRGFRVEIG 436
Query: 400 EVEGVIGKLPGVHESVVVATDNGPAAAVVL--LLEYDLTR--EDINKAVDSTLS-DHKRL 564
+E + + V + VV P +V+ L D T+ + V ++ +
Sbjct: 437 SIETHLQRQENVKMAAVVVLSPSPGQQLVVAHLTLVDKTKGFQAQQAVVKMKIALPEYMI 496
Query: 565 HGGIAFVDSLPHTHSGKLKRMECKKL 642
G + LP SGK+ + + K L
Sbjct: 497 PNGYIIHEELPTLASGKVDKKKLKTL 522
>SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGECVVKGYYKNKEAYSES-FVDGWYKTGDWFHLDENERL 339
K++D N V G GE+ + ECV GY N EA S + GW T D +D+ +
Sbjct: 53 KIVDANNKVVPRGEPGEICCRSECVFLGYLGNLEATSRAKSPQGWLHTEDLGTMDDQGMI 112
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
+ R K + P E++ + K P V +++V+
Sbjct: 113 EVIGRTSEIIKRATVKIFPGEIKAELLKNPLVADAIVI 150
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGECVVKGYYKNKEAYSES-FVDGWYKTGDWFHLDENERL 339
K++ D V G+ GE+ V+ + + Y N EA + GWY+ GD +DE+ ++
Sbjct: 314 KIVGDEDKIVRRGTPGEICVRTAMLFQEYVGNPEATKRAKTATGWYRLGDICVMDESGKI 373
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
L R K K + P E+E V+ + V + VVV
Sbjct: 374 KVLGREKDFIKRATVKIFPAEIERVVLQHADVADVVVV 411
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGECVVKGYYKNKEAYSES-FVDGWYKTGDWFHLDENERL 339
K++ D V G+ GE+ V+ + + Y N EA + GWY+ GD +DE+ ++
Sbjct: 366 KIVGDEDKIVRRGTPGEICVRTAMLFQEYVGNPEATKRAKTATGWYRLGDICVMDESGKI 425
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
L R K K + P E+E V+ + V + VVV
Sbjct: 426 KVLGREKDFIKRATVKIFPAEIERVVLQHADVADVVVV 463
>SB_49817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +1
Query: 37 KLHPDTHLCNGYGTTET-QGFIAVTDRDAEASSNGWVYNI--LHYKLIDDNGAEVGPGSN 207
KL+P T Y +TET I + G + + + K++DD G V G+
Sbjct: 318 KLYPKTRAIYLYASTETFMTSIQIVTNQTREEQYGVMSIVPDVEVKVVDDVGNIVAMGTP 377
Query: 208 GELYVKGECVVKGYYKNKEAYSESF-VDGWYKTGDWFHLDENERLHFLER 354
GE+ V+G GY + + S + +GW +TGD + E +L L R
Sbjct: 378 GEILVRGVKTFLGYIDDTDMSSRAITAEGWVRTGDSGYFPEYGKLKLLGR 427
>SB_15902| Best HMM Match : AMOP (HMM E-Value=3.5e-13)
Length = 609
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/77 (25%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +1
Query: 388 VSPEEVEGVIGKLPGVHESVVVATDNGPAAAV---VLLLEYDLTREDINKAVDSTLSDHK 558
V P E+E ++ P + ++ V+ + A + ++ + LT +D+ + V+ ++ +K
Sbjct: 1 VPPAELEAILVLHPSITDAAVIGVPDDEAGELPRAYVVSDGSLTEQDVMQFVEERVAPYK 60
Query: 559 RLHGGIAFVDSLPHTHS 609
+L GG+ F+DS+P + S
Sbjct: 61 KLRGGVEFIDSMPRSVS 77
>SB_37108| Best HMM Match : AMP-binding (HMM E-Value=2e-09)
Length = 488
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 196 PGSNGELYVKGECVVKGYYKNKEAYSESF-VD----GWYKTGDWFHLDENERLHFLERRK 360
P + GE+ + G V GYYKN + E F VD W+ TGD ++ L ++R+K
Sbjct: 291 PFARGEIVIGGSNVTLGYYKNPQKTQEDFEVDRNGQRWFHTGDIGEFHDDGCLKIIDRKK 350
Query: 361 FNFKFR-GCHVSPEEVEGVIGKLPGVHESVVVATDNGPAAAVVLLL 495
K + G +VS +VE + + V E+V V D+ V L++
Sbjct: 351 DLVKLQSGEYVSLGKVEAALAQCQYV-ENVCVFADSLKTFCVCLVV 395
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 6/156 (3%)
Frame = +1
Query: 4 VTPDLVKEFKEKLHPDTHLCNGYGTTETQGFIA--VTDRDAEASSNGWV--YNILHYKLI 171
+ P L+K + L + Y TE VT + ++ G++ + K++
Sbjct: 323 IDPTLLKRVFQALPALCEIQIVYAATEFNVLATCDVTRENIDSDEYGYLDCHEGTELKVV 382
Query: 172 DDNGAEVGPGSNGELYVKGECVVKGYYK-NKEAYSESFVD-GWYKTGDWFHLDENERLHF 345
D G V G+ GELY++ ++ E Y S GW +T D L N +
Sbjct: 383 DSEGHLVPVGTPGELYIRTAAMLHDVDTLGLEGYQRSTTPTGWQRTKDHAFLTANRKFKL 442
Query: 346 LERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
L R K + P EVE V+ K P V V V
Sbjct: 443 LGRIDNLIKCASESIQPTEVESVLTKHPNVVSVVAV 478
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Frame = +1
Query: 4 VTPDLVKEFKEKLHPDTHLCNGYGTTETQGFIAVTDRDAEA--SSNGWVYNILHYKLIDD 177
+ P+++ ++KEK D GYG TET + T R E S G ++ID+
Sbjct: 331 LNPEVMVDWKEKTGLDIR--EGYGQTETT-LLCGTFRCIETRPGSMGKPAPGYDVRVIDE 387
Query: 178 NGAEVGPGSNGEL--YVKGECVV---KGYYKNKEAYSESFVDGWYKTGDWFHLDENERLH 342
E G G++ Y+K V Y ++ E ++ +Y TGD DE+ L
Sbjct: 388 KCNETPAGIEGDIAVYLKPRRPVGLFSEYIEDYERNVSAYRGDYYLTGDRAVRDEDGYLW 447
Query: 343 FLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVAT 459
F+ R G + P EVE + + P V E+ VV++
Sbjct: 448 FIGRSDDVIISAGYRIGPFEVESALIEHPAVAEAAVVSS 486
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGECVVKGYYKNKEAYSES-FVDGWYKTGDWFHLDENERL 339
K++ D V G+ GE+ V+ V Y N EA ++ GW++ GD ++E+ ++
Sbjct: 355 KIVGDGDEVVPRGTPGEICVRSAMVFSEYVGNPEATKQAKTATGWFRLGDIGVMNESGKV 414
Query: 340 HFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVV 450
L R+K K +S ++E VI V ++VV
Sbjct: 415 KVLGRKKDFIKRATLKISSLQIEKVILGHADVSDAVV 451
>SB_32820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 49 DTHLCNGYGTTETQGFIAVT-DRDAEASSNGWVYNILHYKLIDDNGAEVGPGS-NGELYV 222
D + GYG TE ++ +D +A G + KL+D GE+ +
Sbjct: 75 DCRIMEGYGQTECTACASLQLPQDMQAGIVGPPLTCNYIKLVDVPEKSYSTKDLKGEVCI 134
Query: 223 KGECVVKGYYKNKEAYSESF-VDGWYKTGD 309
KG V+ Y+KN E +E+ DGW TGD
Sbjct: 135 KGPNVIPRYHKNPEKTAETLDEDGWLHTGD 164
>SB_54496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 388 VSPEEVEGVIGKLPGVHESVVVATDN---GPAAAVVLLLEYDLTREDINKAVDSTLSDHK 558
V P E+E ++ P + ++ V+ + G ++++ +++ +I V ++ K
Sbjct: 72 VPPAELEALLVSHPHIADAAVIGIPDDVAGELPRAFVVVKAEISEREILDFVTEHVAPEK 131
Query: 559 RLHGGIAFVDSLPHTHSGKLKRMECKK 639
+L G+ FV+++P T +GK+ R KK
Sbjct: 132 KLRXGVEFVEAIPKTPTGKILRRVLKK 158
>SB_43724| Best HMM Match : AMP-binding (HMM E-Value=2.6e-09)
Length = 490
Score = 41.1 bits (92), Expect = 0.001
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Frame = +1
Query: 55 HLCNGYGTTETQGFIAVT-DRDAEASSNGWVYNILHYKLIDDNGAEV-GPGSNGELYVKG 228
H+ GYG TET + D G KL+D GE+ G
Sbjct: 240 HVLEGYGQTETTAAATIQLVGDHTFGHVGPPMPCTKIKLVDVPDMNYFAKDGKGEICFYG 299
Query: 229 ECVVKGYYKNKEAYSESF-VDGWYKTGDWFHLDENERLHFLERRKFNFK 372
V KGY + E E+ DGW +GD EN L ++R+K FK
Sbjct: 300 PNVFKGYLHDPEKTREAIDEDGWLHSGDVGEWTENGTLKLIDRKKHIFK 348
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 38.7 bits (86), Expect = 0.005
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Frame = +1
Query: 70 YGTTETQ--GFIAVTDRDAEASSNGWVYNI--LHYKLIDDNGAEVGPGSNGELYVKGECV 237
YG TET G ++ + G ++ I + K++D G V G GE+ V+
Sbjct: 343 YGCTETLLVGLQPISKENVMTEDYGKMFVIPGVEIKVVDREGVVVPRGVIGEVCVRSPKA 402
Query: 238 VKGYYKNKEAYSE-SFVDGWYKTGDWFHLDENERLHFLERRKFNFKFRGCHVSPEEVEGV 414
Y + A + GW T D LD +R+ R++ + K V P E+E
Sbjct: 403 FLEYLDDPVATAGVKTSSGWVHTADLGMLDSRDRIQIFGRKRDSIKRSTRLVYPVEIERT 462
Query: 415 IGKLPGVHESV 447
+ P V +++
Sbjct: 463 MMNNPHVKQAI 473
>SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 514
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGECVVKGYYK-NKEAYSESF---VDGWYKTGDWFHLDEN 330
K++D G V + GEL V+G +V N A S GW+ T DW +
Sbjct: 373 KVVDSEGRLVPVDTAGELCVRGAAMVHSANPFNLPATSHRSPITATGWFHTSDWAAITSE 432
Query: 331 ERLHFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVV 453
+ L R KF V P+EVE ++ + + + VV
Sbjct: 433 GLVRILGRMDDVIKFATDSVQPKEVEEILCEHGAISDVKVV 473
>SB_31669| Best HMM Match : RepL (HMM E-Value=5.7)
Length = 237
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 214 LYVKGECVVKGYYKNKEAYSESF-VDGWYKTGDWFHLDENERLHFLERRKFNF 369
L ++G V G+ N+E E+ VDGW +GD +D+N+ + R F F
Sbjct: 22 LCMRGRNVFMGFLNNEEKTKEALDVDGWLHSGDVCKIDDNKEVSLTLVRTFGF 74
>SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 445
Score = 35.5 bits (78), Expect = 0.046
Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSNGELYVKGEC---VVKGYYKNKEAYSESFVD---GWYKTGDWFHLD 324
+++D G V G G + +K + ++N E + +++ G+Y +GD LD
Sbjct: 302 QILDAKGKPVAAGEQGSIAIKLPLPPGCLPTIWRNHERFEAGYLNTYKGYYVSGDGGMLD 361
Query: 325 ENERLHFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATDNG-----PAAAVVL 489
+ L L R G +S E+E V+ V E V+ ++ P V+L
Sbjct: 362 NDGYLFVLGRTDDIINVAGHRLSTGEMEEVVAGHDAVAECAVIGQNSALKGEEPLGLVLL 421
Query: 490 LLEYDLTREDINKAVDSTLSDH 555
D+ E + K + + D+
Sbjct: 422 KDGVDIDEEQLKKELVQRVRDN 443
>SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44)
Length = 393
Score = 35.5 bits (78), Expect = 0.046
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 12/165 (7%)
Frame = +1
Query: 166 LIDDNGAEVGPGSNGELYVKGEC--VVKGYYKNKEAYSESFVD---GWYKTGDWFHLDEN 330
++D+ G E+ G L +K + + Y N + + + D G+Y TGD DEN
Sbjct: 189 IVDEKGNELEGPCEGFLVIKRPWPGMARTIYGNHKRFENVYFDKFRGYYTTGDGCKRDEN 248
Query: 331 ERLHFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATDNGPAAAVVLLLEYDLT 510
R G +S ++E + + V E+ VV+ + + +
Sbjct: 249 GYYWVTGRTDDCMNVSGHLLSTAQIESALVEHDAVSEAAVVSCPHKEKGEGIYCFATLME 308
Query: 511 REDINKAVDSTLSDHKRLHGG-------IAFVDSLPHTHSGKLKR 624
++++ + L RL G I +LP T SGK+ R
Sbjct: 309 NVELDEKLIRELKQKVRLKIGPFASPDVIQSAPALPKTRSGKIMR 353
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Frame = +1
Query: 172 DDNGAEVGPGSNGELY---VKGECVVK--GYYKNKEAYSE------SFVDGWYKTGDWFH 318
D + PG GE+ +K V++ GY +E + S D + +GD
Sbjct: 399 DGLAVDCQPGEAGEMVSRIIKSSAVMRFDGYLNQRETSKKIARSVFSKDDYAFLSGDIVV 458
Query: 319 LDENERLHFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATD 462
DE ++F +R F++ G +VS EVE + K G+ + VV +
Sbjct: 459 QDEYGYVYFRDRTGDTFRWLGENVSTAEVESIASKFVGLRDVVVYGVE 506
>SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 561
Score = 33.9 bits (74), Expect = 0.14
Identities = 59/234 (25%), Positives = 87/234 (37%), Gaps = 21/234 (8%)
Frame = +1
Query: 19 VKEFKEKLHPDTHLCNGYGTTE--TQGFIAVTDRDAEASSNGWVYNIL---HYKLIDDNG 183
VK+ KL P T + Y TE T G T RD S+ +Y I+ K++D G
Sbjct: 321 VKKAISKL-PHTKVLVVYAATEFCTAGRTICT-RDNIDSAEFGLYEIIPGFEVKIVDPEG 378
Query: 184 AEVGPGSNGELYVK--GECVVKGYYKNKEAYSESFVDGWYKTGDWFHLDENERLHFLERR 357
V + GEL V+ G + + + GWY T D L + RL R+
Sbjct: 379 KLVMVDTKGELCVREAGMLLRSDFMIKGHRHEAKSPTGWYFTHDRASLTSDGRLRIHGRQ 438
Query: 358 KFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVATDNG-----PAAAVVLLLEYDLTREDI 522
K + P EVE + + + + V + A VVL + E
Sbjct: 439 DNLIKCATESIQPAEVELPLHVHECIQQVIAVGVPDQRLYEVVCACVVLNPRFRADSESA 498
Query: 523 NKAVDSTLSDHKRLH-GGIAFV--------DSLPHTHSGKLKRMECKKLIEELL 657
++ + R + GI D P T +GK R E K++ E L
Sbjct: 499 IAQINQWACEELRANTAGIDLTRPRYYLVFDEFPKTRTGKDDRKEIKRMAAERL 552
>SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 163 KLIDDNGAEVGPGSN-GELYVKGECVVKGYYKNKEAYSESF-VDGWYKTGD 309
KL+D + +N GE+ ++G V KGY + E E+F GW+ +GD
Sbjct: 152 KLVDVPEMDYYASNNQGEICIRGRNVFKGYLHDAERTEEAFDSSGWFYSGD 202
>SB_51101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +1
Query: 154 LHYKLIDDNGAEVGPGSNGELYVKGECVVKGYYKNK---EAYSESFVD-GWYKTGD 309
L K++D N V G+ GELYV+G ++ K Y + F D WY+T D
Sbjct: 361 LEIKVVDSNENVVPVGTPGELYVRGLSLMHSANALKIEGADYRDCFTDTKWYRTND 416
>SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 374
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 67 GYGTTETQGFIAVTDRDAEASSNGWVYNIL---HYKLID-DNGAEVGPGSNGELYVKGEC 234
GYG TE +T D S +G V +L K+ D G +GP GE+ ++G
Sbjct: 284 GYGLTECTAGAIITPVDPNKSKDGSVGVLLPNLEGKITDLKTGEALGPNQEGEICIRGPM 343
Query: 235 VVKGYYKNKEAY 270
V + K Y
Sbjct: 344 VTRDRLKELIKY 355
>SB_48195| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 1743
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 185 LKWVQGVMVNFTLKANVSLRAITKIKKPTANPLWTVGTKR 304
L W +G+ V+ +++ VS+ K K NPLWT +R
Sbjct: 108 LVWTEGLKVSKSIRIRVSVDGRPKRIKKYTNPLWTAPERR 147
>SB_43676| Best HMM Match : Ion_trans (HMM E-Value=1.2e-39)
Length = 605
Score = 31.1 bits (67), Expect = 0.98
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 374 SGVVTCLRKKLKVSSVNYQEYTRAWWWQLIT 466
S V+ L K +K +SVN+ +++WW +IT
Sbjct: 344 SSVIYDLEKDVKGNSVNFTSIPQSFWWAIIT 374
>SB_17466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 88 QGFIAVTDRDAEASSNGWV-YNILHYKLIDDNGAEVGP 198
Q +T DA+AS+NG V Y I KLID E GP
Sbjct: 2 QVITVITATDADASTNGQVSYQIASIKLIDTVDLEGGP 39
>SB_50102| Best HMM Match : Phage_fiber (HMM E-Value=8.2e-06)
Length = 274
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS ++T
Sbjct: 154 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLLT 192
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 45 LWTQGNTTHNSSLWTQGNTTHNSSLWTHGNTTHNSSLWT 83
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 81 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 119
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 130 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 168
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 202 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 240
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 226 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 264
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 245 AITKIKKPTANPLWTVGTKRETGSIWMRTNAF-----TFWRGGNSISNSGVVTCLRKKLK 409
++T ++ P+ + T T I R NAF T GNSI S + C RK +
Sbjct: 1397 SLTTVRSPSVKTVKT--TAAHIAVIKARDNAFELTPCTISSSGNSICISFFLKCCRKNRR 1454
Query: 410 VSSVN 424
+SS+N
Sbjct: 1455 ISSLN 1459
>SB_14151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS ++T
Sbjct: 121 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLLT 159
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 97 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 135
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 169 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 207
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 281 LWTVGTKRETGSIWMR---TNAFTFWRGGNSISNSGVVT 388
LWT G S+W + T+ + W GN+ NS + T
Sbjct: 193 LWTQGNTTHNSSLWTQGNTTHNSSLWTQGNTTHNSSLWT 231
>SB_34821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +2
Query: 203 VMVNFTLKANVSLRAITKIKKPTANPLWTVGTKRETGSIWMRTNAFTFWRGGNSISNSG- 379
V+ F LK N R + +K ANP + + G W + +W G+ + G
Sbjct: 297 VVSKFLLKQN---RKVF-MKTSAANPSYKASIRIPKGCNWKKRKNKVYWIAGDVVPGKGA 352
Query: 380 VVTCLRKKLKVS 415
V+TC ++ K S
Sbjct: 353 VMTCFLREEKWS 364
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -1
Query: 545 SVESTALLISSLVRSYSSKRTTAAAGPLSVATTTLSCTPGNLPMTPSTSS 396
+ +S ++ + + ++K TT ++ + ATTTLS + TPSTS+
Sbjct: 450 ATKSQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTST 499
>SB_55652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 653
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 196 PGSNGELYVKGECVVKGYYKNKEAYSESFVDGWYKTG 306
PG NGE YV +C VKG + ++ + V + G
Sbjct: 530 PGPNGEKYVWWQCTVKGGRETRDVGAYELVKACEELG 566
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +3
Query: 486 PLTRIRPY*RRY**GCRLNTKRSQEIARRHCI-RGFIAA--YALGKTKENGMQEAHRRTL 656
P+ R P RRY R R IARR+ I RG+ A Y + + G++E R +
Sbjct: 143 PIARRYPIARRYPIARRYPVARRYPIARRYPIARGYPIARRYPIARFSSAGIEETSMRCV 202
Query: 657 KGWKMFLIDFD 689
+ ++D D
Sbjct: 203 STVQAEVLDVD 213
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 178 NGAEVGPGS---NGELYVKGECVVKGYYKNKEAYSESFVDGWYKT 303
N + +G GS +G+L V G C GY + E+Y + VD W T
Sbjct: 374 NHSRLGAGSALLDGQLLVIGGCGQTGYLSSVESY-DPLVDEWTVT 417
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 136 GWVYNILHYKLIDDNGAEVGPGSNGELYVKGECVVKG 246
GW ++L L +D VG G+N + GE ++ G
Sbjct: 2606 GWSSSVLLPILFEDGKGRVGQGTNEAYFGDGESIIVG 2642
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 242 RAITKIKKPTANPLWTVGTKRET 310
+A TKI K T +P+W GT ET
Sbjct: 232 KARTKIAKTTGDPVWDQGTGGET 254
>SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 27.9 bits (59), Expect = 9.1
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 9/130 (6%)
Frame = +1
Query: 289 GWYKTGDWFHLDENERLHFLERRKFNFKFRGCHVSPEEVEGVIGKLPGVHESVVVA---- 456
G+Y TGD D++ R G + EVE + V E+ VV
Sbjct: 599 GYYFTGDGALRDKDGHYRITGRMDDVVNVSGKRLGTAEVEDAMDNHSAVAETAVVGFPHP 658
Query: 457 -TDNGPAAAVVL----LLEYDLTREDINKAVDSTLSDHKRLHGGIAFVDSLPHTHSGKLK 621
G A L +E + RE++ K V + + I V LP T SGK+
Sbjct: 659 IKGEGIYAYATLKDDAQIEPEQFREEVKKLVRQKIGAF-AVPEIIQVVPGLPKTRSGKIM 717
Query: 622 RMECKKLIEE 651
R +K+ ++
Sbjct: 718 RRILRKVAQD 727
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,614,820
Number of Sequences: 59808
Number of extensions: 464240
Number of successful extensions: 1416
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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