Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30394
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.20 
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           25   1.9  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   5.7  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -1

Query: 521 ISSLVRSYSSKRTTAAAGPLSVATTTLSCTPGNLPMTPSTSSGDT*QP 378
           I SLV   +   TT    P SVA TT +  PG    TP+ ++  T QP
Sbjct: 395 IRSLVNGGTPSTTTM---PPSVAPTTSTVAPGTTTTTPTGANPGTTQP 439


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = -1

Query: 611 PECVCGNESTNAMPPCNLL*SLSVESTALLISSLVRSYSSKRTTAAAGPLSVATTTLSCT 432
           P       +T   P    +   +  + A   ++ V    +  TT A+GP++   +T + T
Sbjct: 25  PTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTT 84

Query: 431 PGNLP 417
           P + P
Sbjct: 85  PSSAP 89


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 485 TTAAAGPLSVATTTLSCTPGNLP 417
           TT A+GP++   +T + TP + P
Sbjct: 77  TTVASGPVTTTGSTDTTTPSSAP 99


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,579
Number of Sequences: 2352
Number of extensions: 15808
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)