Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30392
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.31 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.31 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.55 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 359 FVKITYVMYLTKLASAWLKCQRTPNCTXSCWSHLLC 466
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 359 FVKITYVMYLTKLASAWLKCQRTPNCTXSCWSHLLC 466
           +   T  +Y T L +A   C  TPN T + WSH  C
Sbjct: 122 YYHFTLELY-TVLGAACQVC--TPNATNTVWSHCQC 154


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 515  KPTRLWWSPCSEKPKQTTRIRSRRMLC*KSTPRTFCRPT 631
            KP+  WWS  +  P  TT    R      +T  T  RPT
Sbjct: 1038 KPST-WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPT 1075


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 497 TVGSMSWKRACTISVTSS 444
           T  S+SW   C+I+ TSS
Sbjct: 173 TGNSLSWNNPCSINSTSS 190


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 391 EARKRLAEVPKDTKLYSXLLVTLI 462
           +A K L   PK  K+YS LL+T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +1

Query: 448 LVTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVV 594
           LV++  + L +L E     + R+ DKA  E L    ++   NK++K VV
Sbjct: 530 LVSVTKEGL-ELPEDEEEKKKREEDKAKFEGLCKVMKSILDNKVEKVVV 577


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -3

Query: 379 YVRDLHELSVPSDELGSACSKIGSSSEVQPASPS 278
           Y  DL   S+   EL +     GSS   QPA+ S
Sbjct: 223 YYGDLDLKSIRKSELLAGLQSSGSSRSHQPATKS 256


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 486 GTHCHHPRPSNRQGSGGVPARKSPNRLQ 569
           G H     PS   G+GG+P +    R Q
Sbjct: 255 GLHATGSAPSPTAGAGGLPPQVPSPRSQ 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,378
Number of Sequences: 336
Number of extensions: 2976
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)