Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30392
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPas...   182   5e-46
U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subun...   182   5e-46
AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH0368...   182   5e-46
AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,...   182   5e-46
AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,...   182   5e-46
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    33   0.26 
AE014296-2483|AAN11792.1|  175|Drosophila melanogaster CG6988-PB...    29   5.6  

>U38951-1|AAB09739.1|  226|Drosophila melanogaster vacuolar ATPase
           subunit E protein.
          Length = 226

 Score =  182 bits (442), Expect = 5e-46
 Identities = 97/177 (54%), Positives = 115/177 (64%)
 Frame = +1

Query: 127 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 306
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 307 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSXLLVTLIVQALFQLM 486
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 487 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSXDTCGGIELVA 657
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLA 185


>U38198-1|AAB09738.1|  226|Drosophila melanogaster V-ATPase subunit
           E protein.
          Length = 226

 Score =  182 bits (442), Expect = 5e-46
 Identities = 97/177 (54%), Positives = 115/177 (64%)
 Frame = +1

Query: 127 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 306
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 307 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSXLLVTLIVQALFQLM 486
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 487 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSXDTCGGIELVA 657
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLA 185


>AF145618-1|AAD38593.1|  226|Drosophila melanogaster BcDNA.GH03683
           protein.
          Length = 226

 Score =  182 bits (442), Expect = 5e-46
 Identities = 97/177 (54%), Positives = 115/177 (64%)
 Frame = +1

Query: 127 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 306
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 307 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSXLLVTLIVQALFQLM 486
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 487 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSXDTCGGIELVA 657
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLA 185


>AE014297-290|AAF51997.1|  226|Drosophila melanogaster CG1088-PB,
           isoform B protein.
          Length = 226

 Score =  182 bits (442), Expect = 5e-46
 Identities = 97/177 (54%), Positives = 115/177 (64%)
 Frame = +1

Query: 127 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 306
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 307 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSXLLVTLIVQALFQLM 486
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 487 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSXDTCGGIELVA 657
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLA 185


>AE014297-289|AAF51998.1|  226|Drosophila melanogaster CG1088-PA,
           isoform A protein.
          Length = 226

 Score =  182 bits (442), Expect = 5e-46
 Identities = 97/177 (54%), Positives = 115/177 (64%)
 Frame = +1

Query: 127 RNSIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXXXXXXX 306
           +  IKHMMAFIEQ                FNIEKGRLVQQQRLKIM              
Sbjct: 9   QKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRLKIMEYYEKKEKQVELQK 68

Query: 307 XIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSXLLVTLIVQALFQLM 486
            IQSSNMLNQARLKVLKVREDHV +VLD+ARKRL EV K+   Y  +L  LIVQ LFQ+M
Sbjct: 69  KIQSSNMLNQARLKVLKVREDHVSSVLDDARKRLGEVTKNQSEYETVLTKLIVQGLFQIM 128

Query: 487 EPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSXDTCGGIELVA 657
           EP V +R R+ D  LV ++L  A   YK +I ++V L +D ++FLS DTCGG+EL+A
Sbjct: 129 EPKVILRCREVDVPLVRNVLPAAVEQYKAQINQNVELFIDEKDFLSADTCGGVELLA 185


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 33.5 bits (73), Expect = 0.26
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +3

Query: 483 HGTHCHHPRPSNRQGSGGVPARKSPNRLQE*DQEGCCVESRHREL 617
           H  H  H R S RQGSG +P     +      +   C   RHR +
Sbjct: 178 HSHHSRHSRRSRRQGSGSLPGAHQGSANHSVMRPSICTSRRHRSV 222


>AE014296-2483|AAN11792.1|  175|Drosophila melanogaster CG6988-PB,
           isoform B protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 143 T*WPSSNKRPTKRPNKSMRRPRRSSTSKRAVLSSSNVSRLWNTMK 277
           T W +   RP+ + N S RR  RSSTS    LS  + S    T++
Sbjct: 89  TSWRALRSRPSPQSNTSARRTTRSSTSTWTGLSMISSSSSMPTVR 133



 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 107 LSDAVCSETVSST*WPSSNKRPTKRPNKSMRRPRRSS 217
           LS    S ++ +  WP  +  P++RP +  RRPRR+S
Sbjct: 120 LSMISSSSSMPTVRWPIPS--PSRRPRRRRRRPRRTS 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,429,342
Number of Sequences: 53049
Number of extensions: 585077
Number of successful extensions: 2035
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2015
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)