Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30391
         (793 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.52 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.5  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = +3

Query: 354 YVILYVPCAILKFY------SLKRIIIF-HMVFLFKHYMF*RERFMRNLGGPI 491
           +V  Y P A + FY      S++ III  H V + K + F  E  MRN G  I
Sbjct: 109 FVHFYYPVATMSFYVLNFFGSIQFIIISKHWVTIMKEWSF-MEMSMRNYGSSI 160


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 601 YLYNKQLSLFTNK*YH*IYKNPYPRK 524
           YLY +Q S  T       Y+ PYPR+
Sbjct: 23  YLYWQQTSNLTTSKLLYTYRQPYPRQ 48


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 19  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 174
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 58  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 165
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 706 ILPVVICLSQRLSHACLS 759
           I P VI    R+SH C+S
Sbjct: 71  IRPCVISRQLRVSHGCVS 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,966
Number of Sequences: 336
Number of extensions: 3127
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)