Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30388
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.91 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.91 
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 571 PHPPPLQHTPAAPVPSP 621
           PHPP L   PA   P P
Sbjct: 238 PHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 571 PHPPPLQHTPAAPVPSP 621
           PHPP L   PA   P P
Sbjct: 130 PHPPHLSSHPAIVTPGP 146


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
 Frame = +2

Query: 167 EHAQNQTVLSTPQWTVQMR-----YYSSLPSHIKV------NLPALSPTMESGSIVSWEK 313
           E+ + + ++ST + T+        Y+S L S+ K+      N P L+P ++  S+   ++
Sbjct: 17  ENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAVQGSSLTEGKR 76

Query: 314 KEGDKLSEGD 343
            +  K   GD
Sbjct: 77  SKRSKRPNGD 86


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +2

Query: 200 PQWTVQMRYYSSLPSHIKVNLPALS---PTMESGSIVSWEKKEG 322
           PQWT Q         HIK  +P +S    +M  GS   W +  G
Sbjct: 54  PQWTWQCINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWPQPTG 97


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 146 KVTNKLLEHAQNQTVLSTPQWTVQMRYYSSL 238
           K  NKL  H    T+L+   WT+   Y+ ++
Sbjct: 226 KKINKLYGHQLLLTILTYLIWTIYEMYHLAI 256


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 577 PPPLQHTPAAPVPSPAP 627
           PPP     A P PS +P
Sbjct: 330 PPPPYQISAQPTPSQSP 346


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 568 CPHPPPLQHTPAAPVPSPAP 627
           C + PPL   P  P+P   P
Sbjct: 171 CNNYPPLPQVPPLPLPPIFP 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,520
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)