Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30387
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 439 FCNVYRSFVLFYFSILF 389
           +C+V   F+ ++F+ILF
Sbjct: 76  YCSVLLVFLTYFFNILF 92


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 439 FCNVYRSFVLFYFSILF 389
           +C+V   F+ ++F+ILF
Sbjct: 72  YCSVLLVFLTYFFNILF 88


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -3

Query: 607 IYLMTRVVSESVIYKTSHVYVVQTNFVNIT*NYGCCKTWRTSILF 473
           +YL+  +++  V+Y+   +  V T++VN    Y      + S+ F
Sbjct: 137 VYLLPIIINPLVLYEARKLANVVTDWVNFERIYYKLTKKKLSVFF 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,605
Number of Sequences: 336
Number of extensions: 4099
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)