Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30384
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 90 2e-19
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 85 6e-18
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 57 2e-09
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 52 4e-08
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 47 2e-06
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 38 7e-04
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 32 0.048
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 30 0.20
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 29 0.34
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 29 0.45
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 29 0.60
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 28 1.0
SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch... 26 4.2
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 9.7
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 25 9.7
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 90.2 bits (214), Expect = 2e-19
Identities = 49/137 (35%), Positives = 75/137 (54%)
Frame = +3
Query: 96 GSKQLVFFTMSSRKTAGRRINKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFID 275
G+K+ F SS T+ +R+ + A+RA+S FA +QI E KEAF ++D++ DG I
Sbjct: 10 GAKRAPF---SSNTTSSQRVAAQAAKRASSGAFAQLTSSQIQELKEAFALLDKDGDGNIG 66
Query: 276 KDDLHDMLASLGKNPTEDYLEGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCF 455
++D+ ML SL ++ +ED + M PIN FLT G L P + + AF F
Sbjct: 67 REDVKTMLTSLNQDASEDSINHMFESINPPINLAAFLTAMGSMLCRISPRNDLLEAFSTF 126
Query: 456 DEENNGVIGEERLRELL 506
D+ +G I +R+ L
Sbjct: 127 DDTQSGKIPISTMRDAL 143
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 85.0 bits (201), Expect = 6e-18
Identities = 42/102 (41%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Frame = +3
Query: 213 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNEAP----GPINFTM 380
QIAEF+EAF++ D+++DG I ++L ++ SLG++PT L+ M+NE G I+FT
Sbjct: 10 QIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTE 69
Query: 381 FLTLFGERLQGTDPEDVIKNAFGCFDEENNGVIGEERLRELL 506
FLT+ +++ TD E+ ++ AF FD++ NG I E L +L
Sbjct: 70 FLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVL 111
Score = 36.7 bits (81), Expect = 0.002
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 198 MFDQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNEA----PGP 365
M D E +EAF + D++ +G+I ++L +L SLG+ +++ + M+ EA G
Sbjct: 78 MKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGV 137
Query: 366 INFTMF 383
IN+ F
Sbjct: 138 INYEEF 143
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 56.8 bits (131), Expect = 2e-09
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +3
Query: 213 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNEAPGPINFTMFLTL 392
Q E KEAF + D ++DG I + +L SLG N T+ L + NE I+ F++
Sbjct: 7 QTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELGDAIDEKKFMSF 66
Query: 393 FGERLQGTDPEDVIKNAFGCFDEENNGVI 479
+L+ T+ E+ AF FD++N+G I
Sbjct: 67 VSNKLRETESEEEYIKAFRVFDKDNSGYI 95
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 52.4 bits (120), Expect = 4e-08
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = +3
Query: 225 FKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNEAPGPINFTMFLTLF--- 395
+K+AF++ D++ G I K + D+L + G+NPT + + + P ++ FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRP 67
Query: 396 -GERLQGTDPEDVIKNAFGCFDEENNGVIGEERLRELL 506
G + G DPE+ +K F FD++ G+IG LR +L
Sbjct: 68 NGFDMPG-DPEEFVK-GFQVFDKDATGMIGVGELRYVL 103
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 46.8 bits (106), Expect = 2e-06
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 207 QAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNE----APGPINF 374
+ Q + EAF + D ++D ID +L + +LG N + + ++ + G +
Sbjct: 33 EEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQM 92
Query: 375 TMFLTLFGERLQGTDPEDVIKNAFGCFDEENNGVIGEERLREL 503
F+ + E++ DP + IK AF FD++ G I LR +
Sbjct: 93 EDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRV 135
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 38.3 bits (85), Expect = 7e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +3
Query: 222 EFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDYLEGMMNEA 356
E +EAF++ D G+ID +DL A LG+N T++ L+ M++ A
Sbjct: 13 EAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLA 57
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 32.3 bits (70), Expect = 0.048
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 270 IDKDDLHDMLAS--LGKNPTEDYLEGMMNEAP-GPINFTMFLTLFGERLQGTDPEDVIKN 440
+ +D L D++ S K + + +G + P G +N + F ++ + DP +
Sbjct: 8 LSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEY 67
Query: 441 AFGCFDEENNGVI 479
F FD + NG I
Sbjct: 68 VFNVFDADKNGYI 80
Score = 29.1 bits (62), Expect = 0.45
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 153 INKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLGKNPTEDY 332
+NK Q+ F D + AE+ FN+ D +++G+ID + L+ + D
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEY--VFNVFDADKNGYIDFKEFICALSVTSRGELNDK 100
Query: 333 L 335
L
Sbjct: 101 L 101
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 30.3 bits (65), Expect = 0.20
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -2
Query: 475 TPLFSSSKHPNAFLMTSSGSVPCSLSPNRVRNIVKLIGPGASFIIPSK*SSV-GFLPKDA 299
TP S P +++SS S+P S S + +I + +S IPS SSV L
Sbjct: 525 TPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSST 584
Query: 298 SISCRSSLSMNPS 260
S +SLS++ S
Sbjct: 585 SSPSSTSLSISSS 597
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.5 bits (63), Expect = 0.34
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 222 EFKEAFNMIDQNRDGFIDKDDLHDMLASL-GKNPTEDYLEGMMNE 353
+ K AF + D +RDG+I +L+ +L + G N ED L+ ++++
Sbjct: 94 KLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDK 138
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 257 VLINHIESLLELCYLSLIKHSKHIGGSTL--CALLVNATTGCL 135
+LIN ++S + LC+L H + + T+ C +V ++ C+
Sbjct: 1119 ILINFLDSFIRLCHLPAKTHDERVTAVTVIRCTQIVALSSSCV 1161
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 28.7 bits (61), Expect = 0.60
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 360 GP-INFTMFLTLFGERLQG----TDPEDVIKNAFGCFDEENNGVIGEERLREL 503
GP + F + L LF QG TD V+K CFD N G +E++ L
Sbjct: 404 GPRVLFQVALALFKVNAQGILNATDDSSVMKVFRQCFDHINQGTAADEKMAAL 456
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3
Query: 204 DQAQIAEFKEAFNMIDQNRDGFIDKDDLHDML--ASLGKNPTEDYLEGMMNEAPGP 365
+ ++ EF+E N + + +DK D HD + A + K P ++ + A P
Sbjct: 267 ESPRVEEFEELLNQFEGDEKVSVDKIDAHDKMTEAQVVKIPPVQFMNARVAAAENP 322
>SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 681
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 452 APKCIFDDILRVSALQSLTKQSEKHRKVNWS 360
A + + D+I VSA+QS + S +V WS
Sbjct: 590 ATETVLDEIQGVSAVQSEAESSAAEMRVYWS 620
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = -1
Query: 260 PVLINHIESLLELCYLSLIKHSKHIGGSTLCA 165
P+L +H+E ++ +L L+ K +G + A
Sbjct: 1796 PLLSSHVEVIMRKTFLQLLSEIKRLGAHIIHA 1827
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 24.6 bits (51), Expect = 9.7
Identities = 18/92 (19%), Positives = 41/92 (44%)
Frame = +3
Query: 78 F*YFPPGSKQLVFFTMSSRKTAGRRINKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQN 257
F +F G KQ+ T ++ + ++ ++ + A A + F I+
Sbjct: 78 FVFFENG-KQIDMLTGANPQALKEKVALISSKATGTGALASSSSAPVKGFASLQGCIENP 136
Query: 258 RDGFIDKDDLHDMLASLGKNPTEDYLEGMMNE 353
+ +++ D HD+ ++ NP+ +LE ++E
Sbjct: 137 QLECLNQQDDHDLKSAFNSNPS-SFLESDVDE 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,212,084
Number of Sequences: 5004
Number of extensions: 43931
Number of successful extensions: 120
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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