Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30380
(760 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 255 8e-67
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 233 3e-60
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 233 5e-60
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 215 7e-55
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 210 2e-53
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 208 1e-52
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 206 5e-52
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 204 2e-51
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 199 5e-50
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 194 1e-48
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 194 2e-48
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 193 5e-48
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 188 1e-46
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 186 5e-46
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 177 2e-43
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 170 3e-41
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 168 1e-40
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 168 1e-40
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 165 1e-39
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 164 2e-39
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 161 2e-38
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 159 7e-38
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 153 6e-36
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 148 1e-34
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 148 1e-34
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 148 1e-34
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 148 1e-34
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 148 1e-34
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 147 3e-34
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 144 3e-33
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 143 4e-33
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 129 6e-29
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 125 1e-27
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 123 4e-27
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 123 4e-27
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 99 1e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 97 4e-19
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 94 4e-18
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 93 9e-18
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 92 2e-17
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 90 5e-17
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 90 6e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 88 3e-16
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 87 6e-16
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 86 1e-15
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 85 1e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 85 1e-15
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 84 3e-15
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 83 5e-15
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 83 1e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 83 1e-14
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 80 5e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 5e-14
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 80 5e-14
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 79 2e-13
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 77 5e-13
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 77 5e-13
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 76 1e-12
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 75 2e-12
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 75 2e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 6e-12
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 72 2e-11
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 71 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 3e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 4e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 69 1e-10
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 69 2e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 67 5e-10
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 67 5e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 66 1e-09
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 63 6e-09
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 61 3e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 60 6e-08
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 59 1e-07
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 58 2e-07
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 58 2e-07
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 58 3e-07
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 56 7e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 56 7e-07
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 56 9e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 54 4e-06
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 54 5e-06
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 53 7e-06
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 52 2e-05
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 51 3e-05
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 51 3e-05
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 50 5e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 50 8e-05
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 49 1e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 49 1e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 48 3e-04
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 46 0.001
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 46 0.001
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 0.001
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.004
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 43 0.009
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.47
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.3
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 255 bits (625), Expect = 8e-67
Identities = 141/252 (55%), Positives = 152/252 (60%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 8 NHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMV 67
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG TVYP
Sbjct: 68 MPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYP 127
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV AVGI
Sbjct: 128 PLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGI 187
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFWTS*SLYFNFTR 721
TAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF F L F+F++
Sbjct: 188 TAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP-KLMFSFSQ 246
Query: 722 IWYNFSYYFTRK 757
+F F +K
Sbjct: 247 DLVSFHMLFPKK 258
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 233 bits (570), Expect = 3e-60
Identities = 127/219 (57%), Positives = 147/219 (67%)
Frame = -2
Query: 675 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 496
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 495 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTIL 316
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P STI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 315 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIV 136
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMT 179
Query: 135 L*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 19
L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 180 L-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 233 bits (569), Expect = 5e-60
Identities = 122/199 (61%), Positives = 130/199 (65%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 268
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 269 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 448
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 449 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 628
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 629 FDPAGGGDPILYQHLFLIF 685
FDPAGGGDPILYQHLF F
Sbjct: 193 FDPAGGGDPILYQHLFWFF 211
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 215 bits (526), Expect = 7e-55
Identities = 119/228 (52%), Positives = 131/228 (57%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 12 NHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYP 131
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV +V I
Sbjct: 132 PLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLI 191
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 192 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 239
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG+ISH+++
Sbjct: 236 FWFFGHPEVYILILPGFGMISHVVT 260
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 210 bits (514), Expect = 2e-53
Identities = 115/228 (50%), Positives = 128/228 (56%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 71 MPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYP 130
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV AV +
Sbjct: 131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLV 190
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFGIISH+++
Sbjct: 235 FWFFGHPEVYILILPGFGIISHVVA 259
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 208 bits (508), Expect = 1e-52
Identities = 113/228 (49%), Positives = 128/228 (56%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 71 MPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYP 130
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +V +
Sbjct: 131 PLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLV 190
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG+ISH+++
Sbjct: 235 FWFFGHPEVYILILPGFGMISHVVT 259
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 206 bits (503), Expect = 5e-52
Identities = 112/228 (49%), Positives = 128/228 (56%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 11 NHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG TVYP
Sbjct: 71 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYP 130
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ N +H G SVDL IFSLHLAG+SS + Q PLFV +V I
Sbjct: 131 PLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLI 190
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 191 TAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG+ISHI++
Sbjct: 235 FWFFGHPEVYILILPGFGMISHIVT 259
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 204 bits (497), Expect = 2e-51
Identities = 109/228 (47%), Positives = 128/228 (56%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N VPL++GAPD+AFPR+NNI F +VE GAGTG TVYP
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYP 131
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +V I
Sbjct: 132 PLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLI 191
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF F
Sbjct: 192 TAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFF 239
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 199 bits (486), Expect = 5e-50
Identities = 105/196 (53%), Positives = 118/196 (60%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 268
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 269 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 448
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 449 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 628
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 629 FDPAGGGDPILYQHLF 676
FDPAGGGDPILYQHLF
Sbjct: 203 FDPAGGGDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 194 bits (474), Expect = 1e-48
Identities = 113/248 (45%), Positives = 133/248 (53%), Gaps = 2/248 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFWTS*SLYFNF 715
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF + +LY +F
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF----SKTTLYISF 244
Query: 716 TRIWYNFS 739
+ Y F+
Sbjct: 245 FYLIYKFT 252
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 194 bits (473), Expect = 2e-48
Identities = 105/230 (45%), Positives = 126/230 (54%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 12 NHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFF 71
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N VP+++GAPD+AFPR+NNI F +VE G+GTG TV
Sbjct: 72 MVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTV 131
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV +V
Sbjct: 132 YPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF F
Sbjct: 192 LVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFF 241
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFGIISHI+S
Sbjct: 238 FWFFGHPEVYILILPGFGIISHIVS 262
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 193 bits (470), Expect = 5e-48
Identities = 109/230 (47%), Positives = 124/230 (53%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF F
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFF 238
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILI+PGFG++SHI+S
Sbjct: 235 FWFFGHPEVYILIIPGFGMVSHIVS 259
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 188 bits (459), Expect = 1e-46
Identities = 103/230 (44%), Positives = 126/230 (54%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 17 NHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFF 76
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N LVP+++G+PD+AFPR+NNI F +VE G GTG TV
Sbjct: 77 MVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTV 136
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLSS +H G +VDLAIFSLH++G SS S ++PLFV ++
Sbjct: 137 YPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSI 196
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF F
Sbjct: 197 LVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFF 246
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG+ISHI+S
Sbjct: 243 FWFFGHPEVYILILPGFGMISHIVS 267
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 186 bits (453), Expect = 5e-46
Identities = 98/199 (49%), Positives = 117/199 (58%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 268
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 269 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 448
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 449 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 628
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 629 FDPAGGGDPILYQHLFLIF 685
FDP+GGGDPILYQHLF F
Sbjct: 204 FDPSGGGDPILYQHLFWFF 222
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIISQE 755
F FFGHPEVYILILPGFGIISH+I E
Sbjct: 219 FWFFGHPEVYILILPGFGIISHMIFNE 245
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 177 bits (431), Expect = 2e-43
Identities = 100/211 (47%), Positives = 113/211 (53%)
Frame = +2
Query: 5 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 184
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 185 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 364
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 365 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 544
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 545 AFXXXXXXXXXAGAITILLTDRNLNTSFFDP 637
A A IT+LLTDRNLNT+FFDP
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 170 bits (414), Expect = 3e-41
Identities = 99/229 (43%), Positives = 115/229 (50%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 11 NAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFM 70
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
N L+PL LG PD+ FPR+NNI + +ENG GTG T+Y
Sbjct: 71 VMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLY 130
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PPLS +H G SVDLAIF LHL+GISS +L LF AV
Sbjct: 131 PPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVV 190
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 191 ITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFF 239
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILI+PGFGIIS IS
Sbjct: 236 FWFFGHPEVYILIIPGFGIISTTIS 260
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 168 bits (408), Expect = 1e-40
Identities = 98/230 (42%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N L+PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF F
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILI+PGFGIISH++S
Sbjct: 236 FWFFGHPEVYILIIPGFGIISHVVS 260
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 168 bits (408), Expect = 1e-40
Identities = 98/230 (42%), Positives = 117/230 (50%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N L+PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLSS AH G SVDLAIF+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF F
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 165 bits (400), Expect = 1e-39
Identities = 96/230 (41%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N ++PL++GA D++FPRIN+I F +VE+GAGTG TV
Sbjct: 70 LAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLSS AH G SVDLAIFSLHL ISS S ++PLFV A+
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F F
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFF 239
Score = 52.8 bits (121), Expect = 9e-06
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +3
Query: 657 FYINIYF*FFGHPEVYILILPGFGIISHIIS 749
FY + ++ FFGHPEVYILI+PGFGI+SHI+S
Sbjct: 231 FYQHAFW-FFGHPEVYILIIPGFGIVSHIVS 260
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 164 bits (398), Expect = 2e-39
Identities = 95/233 (40%), Positives = 118/233 (50%), Gaps = 2/233 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PG L G++Q++N +V HA
Sbjct: 10 NAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N ++PL++GA D AFPRINNI F +VE+GAGTG TV
Sbjct: 70 MVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTV 129
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV A+
Sbjct: 130 YPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFWTS 694
ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF F T+
Sbjct: 190 LITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFGTT 242
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 161 bits (391), Expect = 2e-38
Identities = 92/229 (40%), Positives = 113/229 (49%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 37 NAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFM 96
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T+Y
Sbjct: 97 VMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLY 156
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PPLS +H VDL IF LHL+GISS +L LF AV
Sbjct: 157 PPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVV 216
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF F
Sbjct: 217 ITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFF 265
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILI+PGFGIIS +IS
Sbjct: 262 FWFFGHPEVYILIIPGFGIISTVIS 286
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 159 bits (386), Expect = 7e-38
Identities = 92/230 (40%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHK IG LY EL PG L G+ YN I T H
Sbjct: 13 NHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFV 72
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N VP+++GAPD++FPR+NN F E G GTG TV
Sbjct: 73 VVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTV 132
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLSS +H G SVDL IFS HL GI S LPLFV +V
Sbjct: 133 YPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF F
Sbjct: 193 AVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFF 242
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG++SHII+
Sbjct: 239 FWFFGHPEVYILILPGFGLVSHIIA 263
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 153 bits (370), Expect = 6e-36
Identities = 84/151 (55%), Positives = 93/151 (61%)
Frame = +2
Query: 224 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 403
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 404 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 583
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 584 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 676
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLF 154
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 148 bits (359), Expect = 1e-34
Identities = 90/231 (38%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTV 134
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
Y PL+ +H G +VDLAIFSLHL+G SS ++ +PLF AV
Sbjct: 135 YFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFW 688
TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF +W
Sbjct: 195 LFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLF--YW 243
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 148 bits (359), Expect = 1e-34
Identities = 92/233 (39%), Positives = 114/233 (48%), Gaps = 5/233 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 39 NAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFM 98
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV- 355
N L+PL++G PD+AFPR+NNI F I+E G GTG T+
Sbjct: 99 VMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLL 158
Query: 356 ---YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 526
YPPLS +H G SVDLAIF+LHL+G+SS +L LF
Sbjct: 159 KDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFG 218
Query: 527 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
A + IT++LTDRN NTSFF+ AGGGDPIL+QHLF F
Sbjct: 219 WATWSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFF 264
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILI+PGFGIIS IS
Sbjct: 261 FWFFGHPEVYILIIPGFGIISTTIS 285
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 148 bits (359), Expect = 1e-34
Identities = 77/196 (39%), Positives = 107/196 (54%)
Frame = +2
Query: 98 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 277
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 278 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 457
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 458 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 637
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 638 AGGGDPILYQHLFLIF 685
+GGGDP+LY+H+F F
Sbjct: 241 SGGGDPLLYEHIFWFF 256
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYILI+P FG++S I+
Sbjct: 253 FWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 148 bits (359), Expect = 1e-34
Identities = 77/196 (39%), Positives = 107/196 (54%)
Frame = +2
Query: 98 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 277
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 278 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 457
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 458 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 637
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 638 AGGGDPILYQHLFLIF 685
+GGGDP+LY+H+F F
Sbjct: 241 SGGGDPLLYEHIFWFF 256
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYILI+P FG++S I+
Sbjct: 253 FWFFGHPEVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 148 bits (359), Expect = 1e-34
Identities = 77/196 (39%), Positives = 107/196 (54%)
Frame = +2
Query: 98 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 277
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 278 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 457
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 458 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 637
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 638 AGGGDPILYQHLFLIF 685
+GGGDP+LY+H+F F
Sbjct: 241 SGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 147 bits (356), Expect = 3e-34
Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Frame = +2
Query: 98 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 277
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 278 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 457
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 458 XXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 637
+ +LPLFV +V ITA A +T+LL DRN NTSFF
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVV 240
Query: 638 AGGGDPILYQHLF------LIFWTS*SLYFNFT 718
+GGGDP+LY+H+F ++ W + +Y T
Sbjct: 241 SGGGDPLLYEHIFYKNPVLILIWLTSGIYLILT 273
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 144 bits (348), Expect = 3e-33
Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 2/202 (0%)
Frame = +2
Query: 86 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 259
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 260 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 439
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 440 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 619
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 620 TSFFDPAGGGDPILYQHLFLIF 685
T+FFDPAGGGDPIL+QH+F F
Sbjct: 323 TTFFDPAGGGDPILFQHIFWFF 344
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 341 FWFFGHPEVYIVILPAFGVISHIVA 365
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 143 bits (347), Expect = 4e-33
Identities = 96/248 (38%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY--- 133
NHKDIGTLY AEL PG + D DQ Y
Sbjct: 35 NHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLW 94
Query: 134 NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXX 313
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 95 NVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLG 154
Query: 314 XXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXX 481
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 155 STFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILN 213
Query: 482 XXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIL 661
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP L
Sbjct: 214 MRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPEL 273
Query: 662 YQHLFLIF 685
YQHLF F
Sbjct: 274 YQHLFWFF 281
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3
Query: 648 ETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
+ + Y ++++ FFGHPEVYI+ILPGFGIIS I+S
Sbjct: 270 DPELYQHLFW-FFGHPEVYIMILPGFGIISQIVS 302
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 129 bits (312), Expect = 6e-29
Identities = 80/196 (40%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLS +H G SVDLAIFSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 536 GITAFXXXXXXXXXAG 583
+TA AG
Sbjct: 189 FVTAILLLLSLPVLAG 204
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 125 bits (302), Expect = 1e-27
Identities = 74/230 (32%), Positives = 99/230 (43%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N ++PL+LGAP++AFPR+N + F + G G+ T
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTF 139
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 140 YPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTS 198
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF F
Sbjct: 199 YLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFF 248
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVY++ILP FGIIS +
Sbjct: 245 FWFFGHPEVYVIILPVFGIISEAV 268
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 123 bits (297), Expect = 4e-27
Identities = 72/229 (31%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +PL++ D++ PR+NN+ + G G G T+YP
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYP 132
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVG 538
PLS++ G +DLA+FSLH+AG+SS F L P+ + +
Sbjct: 133 PLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLF 192
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF F
Sbjct: 193 GTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFF 241
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYILILP FG+ISHI+
Sbjct: 238 FWFFGHPEVYILILPAFGVISHIL 261
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 123 bits (297), Expect = 4e-27
Identities = 67/194 (34%), Positives = 89/194 (45%)
Frame = +2
Query: 104 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 283
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 284 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXX 463
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINL 167
Query: 464 XXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 643
SF LF+ A ITA AG +T++L DRN NTSF+D G
Sbjct: 168 LGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVG 227
Query: 644 GGDPILYQHLFLIF 685
GGD IL+QH+F F
Sbjct: 228 GGDLILFQHIFWFF 241
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI++LP FG+IS I+
Sbjct: 238 FWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 99.1 bits (236), Expect = 1e-19
Identities = 57/123 (46%), Positives = 65/123 (52%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 12 NHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMX 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL++GAPD+AFPR+NN+ F VE GAGTG TVYP
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYP 131
Query: 362 PLS 370
PL+
Sbjct: 132 PLA 134
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 97.1 bits (231), Expect = 4e-19
Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 4/232 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAXXXXX 172
NHK +G Y EL + +I + + YN I T H
Sbjct: 13 NHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIF 72
Query: 173 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 352
N +P++ G+P++A+PRIN+I E G GTG T
Sbjct: 73 FNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWT 132
Query: 353 VYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 529
+YPPLS+++ +VD+ IF L ++G++S + L +
Sbjct: 133 LYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTW 192
Query: 530 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
++ IT+ G + +LL+D + NT FFDP GDPILYQHLF F
Sbjct: 193 SLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFF 244
Score = 50.8 bits (116), Expect = 4e-05
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILP FG+ISH+IS
Sbjct: 241 FWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 93.9 bits (223), Expect = 4e-18
Identities = 64/231 (27%), Positives = 94/231 (40%), Gaps = 3/231 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXXXX 172
NHK IG Y EL G +I D +IYN + T H
Sbjct: 16 NHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVF 75
Query: 173 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 352
N L P++LG D+ +PR+N +E G+GTG T
Sbjct: 76 FNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWT 135
Query: 353 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 532
+YPPLS+++++ G +D IF L AGI+S D++ +
Sbjct: 136 LYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWS 193
Query: 533 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ +T+F ++ DR+ NT FF+ + GDP+LYQHLF F
Sbjct: 194 IVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFF 244
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 241 FWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 92.7 bits (220), Expect = 9e-18
Identities = 68/228 (29%), Positives = 93/228 (40%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NH D+ LY +L P L D +YN VT H
Sbjct: 8 NHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAA 65
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N L+P PD+ FPR+N + F ++ + A G T YP
Sbjct: 66 MPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYP 120
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLSS SV+ ++FSLHLAGI+S + L LF ++ +
Sbjct: 121 PLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVL 174
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ A IT++LTD++L T F+D GGDP+LYQHLF F
Sbjct: 175 VSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFF 222
Score = 38.7 bits (86), Expect = 0.15
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVY++ILP FG+ S I
Sbjct: 219 FWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 91.9 bits (218), Expect = 2e-17
Identities = 69/228 (30%), Positives = 90/228 (39%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG LY L +P + +YN +VT H
Sbjct: 109 DHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFL 168
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +P+ L D+ PR+N++ G G G T+YP
Sbjct: 169 MPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYP 226
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLS G VD +FSLHLAG+SS S + V A
Sbjct: 227 PLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLF 280
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF F
Sbjct: 281 TSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFF 328
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHI 743
F FFGHPEVY+LILPGFGI+SHI
Sbjct: 325 FWFFGHPEVYVLILPGFGIVSHI 347
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 90.2 bits (214), Expect = 5e-17
Identities = 58/195 (29%), Positives = 85/195 (43%)
Frame = +2
Query: 101 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 280
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 281 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 460
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 461 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 640
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
Query: 641 GGGDPILYQHLFLIF 685
GGDP++YQ++F +
Sbjct: 180 KGGDPLIYQNIFWFY 194
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 660 YINIYF*FFGHPEVYILILPGFGIISHII 746
Y NI++ F+ HP VY+ +LP FG S II
Sbjct: 187 YQNIFW-FYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 89.8 bits (213), Expect = 6e-17
Identities = 75/236 (31%), Positives = 99/236 (41%), Gaps = 8/236 (3%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFA 152
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*T 352
N L+PL++GA D+AFPRIN I F I E A TG T
Sbjct: 153 TPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWT 211
Query: 353 VYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 517
+Y PLS N A+ G VDL + LHL+G+S+ S+ L
Sbjct: 212 MYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLD 269
Query: 518 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+F + + AI +LL DRN TSFF AG G IL+QHLF F
Sbjct: 270 IFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFF 323
Score = 42.3 bits (95), Expect = 0.013
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI++LP GIIS+I+
Sbjct: 320 FWFFGHPEVYIIVLPPMGIISYIL 343
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 268
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 269 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 442
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 87.8 bits (208), Expect = 3e-16
Identities = 58/191 (30%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Frame = +2
Query: 131 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 310
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 311 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 487
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 488 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGD 652
++ +LPL + + +TA A +LL DR+ T FF GGGD
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGD 265
Query: 653 PILYQHLFLIF 685
PIL+QHLF IF
Sbjct: 266 PILWQHLFWIF 276
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FGHPEVYI+ILP +GI+ ++S
Sbjct: 273 FWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 86.6 bits (205), Expect = 6e-16
Identities = 83/225 (36%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Frame = +2
Query: 5 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 676
A AIT+L R N SFF P G P + F
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFF 225
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 85.8 bits (203), Expect = 1e-15
Identities = 64/229 (27%), Positives = 90/229 (39%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N ++PL+LGA D+AFPR+N + ++ G TG T Y
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYT 159
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
P S AH +V +F + G SS ++ ++PLFV A+
Sbjct: 160 PYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYA 216
Query: 542 TAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLFLIF 685
T+ G + +L+T NL FDPA GGDP+L+QHLF +
Sbjct: 217 TS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Score = 37.5 bits (83), Expect = 0.36
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F F+ HP VYI++LP FG++S +++
Sbjct: 261 FWFYSHPAVYIMVLPSFGVMSEVVA 285
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 85.4 bits (202), Expect = 1e-15
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 6/234 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXXXX 169
+HK IG LY EL G I + IYN +T H
Sbjct: 17 SHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIML 76
Query: 170 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG 346
N L+P+++G +++ PR+N I F + + +G
Sbjct: 77 FVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSG 136
Query: 347 *TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 523
T+YPPLS+ A G ++DL++ +H+ GISS +F + ++
Sbjct: 137 WTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIY 196
Query: 524 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
++ +T+ AIT LL DRN+N++ +D GDP+LYQHLF F
Sbjct: 197 NFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVI--GDPVLYQHLFWFF 248
Score = 39.9 bits (89), Expect = 0.067
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVY++ILP FG+ S I++
Sbjct: 245 FWFFGHPEVYVIILPVFGLTSLILT 269
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 85.4 bits (202), Expect = 1e-15
Identities = 65/228 (28%), Positives = 86/228 (37%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG Y EL P ++YN ++T H
Sbjct: 26 DHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWI 85
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N L+PL++G D+AFPR+N + F V G T YP
Sbjct: 86 VPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYP 143
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLS G +L I SL L G SS +PLF A+
Sbjct: 144 PLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLA 201
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T+ A A+ +L D TSFF+P GGGDP++YQHLF +
Sbjct: 202 TSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFY 249
Score = 37.9 bits (84), Expect = 0.27
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F F+ HP VYI+ILP FG+IS +I
Sbjct: 246 FWFYSHPAVYIMILPFFGVISEVI 269
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 84.2 bits (199), Expect = 3e-15
Identities = 60/228 (26%), Positives = 87/228 (38%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG +Y +L P + +++N + T H
Sbjct: 31 DHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVG 90
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N VPL++GA D+AFPR+N+ F + + G Y
Sbjct: 91 MPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYV 149
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLSS + VD I L + GI S S ++PLFV + +
Sbjct: 150 PLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLM 209
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
A A+ +LL DR L ++FFDP GG +L+QH F IF
Sbjct: 210 QAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIF 257
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +3
Query: 672 YF*FFGHPEVYILILPGFGIISHII 746
YF FGHPEVYILILPGFG+IS +I
Sbjct: 253 YFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 83.4 bits (197), Expect = 5e-15
Identities = 59/228 (25%), Positives = 88/228 (38%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N L+P+++GA D+AFP++N + F +V+ GA TG T Y
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYT 152
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
P S+ + V L F L G SS + +LPLFV ++
Sbjct: 153 PYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYA 209
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T+ ++ ++ + FDPA GGDP+L+QH F +
Sbjct: 210 TSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFY 257
Score = 34.7 bits (76), Expect = 2.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 672 YF*FFGHPEVYILILPGFGIISHII 746
+F F+ HP VYI++LP +IS ++
Sbjct: 253 FFWFYSHPAVYIMVLPAMAVISEVV 277
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 82.6 bits (195), Expect = 1e-14
Identities = 62/223 (27%), Positives = 92/223 (41%), Gaps = 3/223 (1%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 268
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 269 IRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGIS 439
F G A +G YPP+S + + H L I ++ L+GIS
Sbjct: 123 AAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGIS 182
Query: 440 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 619
S F ++P+FV G +LL D +
Sbjct: 183 SIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFG 242
Query: 620 TSFFDPAGGGDPILYQHLFLIFWTS*SLYFNFTRIWYNFSYYF 748
TSFF P GGGDP+L+QH F F++ ++Y ++ FS F
Sbjct: 243 TSFFRPEGGGDPVLFQHFFW-FYSHPAVYVLVLPVFGIFSELF 284
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 82.6 bits (195), Expect = 1e-14
Identities = 62/230 (26%), Positives = 90/230 (39%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HKDIG LY EL + +YN ++T+H
Sbjct: 67 DHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFG 126
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TV 355
N +PL++ A D+AFPRIN I F ++ A T T+
Sbjct: 127 TPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTM 185
Query: 356 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
Y PLS ++ +VD+ + LHL G+S+ + L +F +
Sbjct: 186 YTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTM 243
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ A+ +LL DRN T+FF A GGDPI +QHLF F
Sbjct: 244 LTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVA-GGDPIFWQHLFWFF 292
Score = 40.3 bits (90), Expect = 0.050
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVY+L+LP GI+S I+
Sbjct: 289 FWFFGHPEVYVLVLPPMGIVSLIL 312
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 80.2 bits (189), Expect = 5e-14
Identities = 63/229 (27%), Positives = 88/229 (38%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXX 178
+HK IG Y +L P + IG D+ YN I T H
Sbjct: 28 DHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLF 86
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
LVPL++G IAFPR+N + V+ G G Y
Sbjct: 87 AVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAY 145
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PLS G+ D+ + +S+ S D++PLFV ++
Sbjct: 146 VPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSML 205
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFF 254
Score = 39.5 bits (88), Expect = 0.088
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYI+ LP G++S I++
Sbjct: 251 FWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 224 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 403
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 404 LAIFS 418
LAI+S
Sbjct: 61 LAIYS 65
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = +1
Query: 523 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFIST 669
CM C +Y TCFS S+Y IIN K KY IF W P +ST
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLST 145
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 80.2 bits (189), Expect = 5e-14
Identities = 51/128 (39%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N LVP+++GAPD+AFPR+NNI F VE GAGTG TV
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTV 128
Query: 356 YPPLSSNI 379
LS I
Sbjct: 129 KCKLSQII 136
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 78.6 bits (185), Expect = 2e-13
Identities = 59/228 (25%), Positives = 83/228 (36%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG +Y +LG P + +YN + T H
Sbjct: 30 DHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGL 89
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +VPL++GA D+AFPR+N + V G Y
Sbjct: 90 MPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYA 148
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ VD I + L G++S + +++PLFV +
Sbjct: 149 PLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLV 208
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 209 VAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFF 256
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYILILP GIIS ++
Sbjct: 253 FWFFGHPEVYILILPTMGIISEVL 276
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 77.0 bits (181), Expect = 5e-13
Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 13 NHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFF 72
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N VP+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 73 MVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 77.0 bits (181), Expect = 5e-13
Identities = 62/230 (26%), Positives = 88/230 (38%), Gaps = 2/230 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HKDIG LY +L P S Y VT H
Sbjct: 20 DHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFA 79
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVY 358
N +VPL +GA D+AFPR+N + + E+GA G T+Y
Sbjct: 80 SPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLY 138
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PL++ I G +DLA ++ L +S + ++P+F ++
Sbjct: 139 APLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSIL 198
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLFLIF 685
T +LL DRNL T FF +PAGG +L+ HLF F
Sbjct: 199 FTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYIL+ P G ++ +IS
Sbjct: 243 FWFFGHPEVYILLFPALGAMADVIS 267
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 75.8 bits (178), Expect = 1e-12
Identities = 58/229 (25%), Positives = 85/229 (37%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK +G +Y AEL PG ++ +N + T H
Sbjct: 37 DHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYG 96
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVY 358
N ++PL +GAPD+AFPR+N F + GA G T+Y
Sbjct: 97 TPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMY 155
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PLS I G D+ I + GI S + ++P+F +
Sbjct: 156 SPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIF 215
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ + A +L DR L +DPA GG +L+QHLF F
Sbjct: 216 VVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFF 263
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVY+L LP FGI+S II
Sbjct: 260 FWFFGHPEVYVLALPFFGIVSEII 283
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 74.9 bits (176), Expect = 2e-12
Identities = 64/240 (26%), Positives = 94/240 (39%), Gaps = 2/240 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXX 178
+HK +G LY EL G I DD +YNT + H
Sbjct: 13 DHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAF 72
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
N +PL++GA D+AFPR+N + + + T Y
Sbjct: 73 QIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGY 132
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PP S I H + FS+ L G +S +++L +FV A
Sbjct: 133 PPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT- 188
Query: 539 ITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFWTS*SLYFNF 715
+ AF G A+T+L D+ + T FFD A GGD + YQ+LF F++ ++Y F
Sbjct: 189 LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFW-FYSHPAVYVIF 247
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 74.9 bits (176), Expect = 2e-12
Identities = 56/229 (24%), Positives = 85/229 (37%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG +Y +L P + + YN I+T H
Sbjct: 23 DHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFI 82
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVY 358
N +VPL+LGA D+A PR+N + GA G T Y
Sbjct: 83 IQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFY 142
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
P S A VD + ++ L G SS S ++P++V +V
Sbjct: 143 YPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVF 199
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ A ++L +R + S+F+PA GGDP+L+Q F +
Sbjct: 200 AASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFY 248
Score = 33.5 bits (73), Expect = 5.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 672 YF*FFGHPEVYILILPGFGIISHIIS 749
+F F+ HP VY+++LP GI++ + S
Sbjct: 244 FFWFYSHPTVYVMLLPYLGILAEVAS 269
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 73.3 bits (172), Expect = 6e-12
Identities = 55/228 (24%), Positives = 82/228 (35%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK +G +Y A+L P + D YN I T H
Sbjct: 52 DHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMA 111
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +VPL +GA D+AFP +NN+ F ++ G T Y
Sbjct: 112 MPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYM 170
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+SN G + + L +AGI + + ++P+F I
Sbjct: 171 PLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLI 230
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T A+ +L DR FF GG P+L+ +LF I+
Sbjct: 231 TMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIW 278
Score = 42.3 bits (95), Expect = 0.013
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
H F + + N+++ +GHPEVYI+ILP FGI S IIS
Sbjct: 258 HFFTLEAGGMPMLWANLFW-IWGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 71.7 bits (168), Expect = 2e-11
Identities = 62/226 (27%), Positives = 87/226 (38%), Gaps = 1/226 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXX 178
+H D+G LY AEL PG+ I D +N + T H
Sbjct: 19 HHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLF 78
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
N VP+++ D+A+P++N I F + T
Sbjct: 79 ILPFASAVG-NYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT----- 132
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 676
++ A A+ +LLTDR + FF+PA GGDPI Y HLF
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 71.3 bits (167), Expect = 2e-11
Identities = 55/202 (27%), Positives = 82/202 (40%), Gaps = 15/202 (7%)
Frame = +2
Query: 125 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 304
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 305 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 472
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 473 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----- 637
+ +LPL + A+ ITA A ++L DR + T FF P
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVV 265
Query: 638 ------AGGGDPILYQHLFLIF 685
AGGG P+L+QHLF +
Sbjct: 266 NNSPMAAGGGQPLLWQHLFWFY 287
Score = 35.1 bits (77), Expect = 1.9
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F F+ HP VYI+ILP G++S I++
Sbjct: 284 FWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 542 TAFXXXXXXXXXAGAITILLTDR 610
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 1.9
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 196 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 321
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 70.5 bits (165), Expect = 4e-11
Identities = 49/228 (21%), Positives = 85/228 (37%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK I LY +L P + Q YN ++T H
Sbjct: 23 DHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAA 82
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +VPL +GA D++FP +N + F + G T Y
Sbjct: 83 MPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYA 141
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
LS + +G +D + L ++G+ + ++ +LPLF +
Sbjct: 142 SLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFV 199
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ + +++ DR T+FF+P GG+ ++++HLF IF
Sbjct: 200 ASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIF 247
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FGHPEVYILILP FGI S +I
Sbjct: 244 FWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 385
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 386 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 565
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 566 XXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLFLIF 685
A +LL +R+L FF DPA GDP L+QH+F F
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFF 248
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIISQ 752
F FFGHPEVYIL+LP G++S +I +
Sbjct: 245 FWFFGHPEVYILVLPAMGLVSEVIQR 270
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 68.5 bits (160), Expect = 2e-10
Identities = 52/228 (22%), Positives = 81/228 (35%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NH D+G ++ A+L P S + YN + T H
Sbjct: 28 NHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFA 87
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
L+P +LG+ D+AFPR+ F + +G +YP
Sbjct: 88 IPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYP 146
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PLSS + G + D + + IS+ S ++P+F +
Sbjct: 147 PLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALV 206
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA +L +R + FF A GGD +L+QHLF +F
Sbjct: 207 TAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLF 254
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FGHPEVYI+ LP G IS I+
Sbjct: 251 FWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 66.9 bits (156), Expect = 5e-10
Identities = 56/228 (24%), Positives = 83/228 (36%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG Y +L P + + Y+++ T H
Sbjct: 48 DHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYA 107
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N L PL+LG+ D+AFPR+ + + G Y
Sbjct: 108 LPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYV 166
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 167 PLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLT 226
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ + A +L DRN T FFD A GG P+L+QHLF +F
Sbjct: 227 ASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMF 274
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 66.9 bits (156), Expect = 5e-10
Identities = 45/128 (35%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N L+PL+LGA D+AF R+NNI F +VE GAGTG TV
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTV 134
Query: 356 YPPLSSNI 379
SS +
Sbjct: 135 KKICSSKM 142
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 65.7 bits (153), Expect = 1e-09
Identities = 42/157 (26%), Positives = 66/157 (42%)
Frame = +2
Query: 215 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 394
L+PL++GA D+ FPR+ + + + G +Y PLS++ G
Sbjct: 124 LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGL 183
Query: 395 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 574
S D + + LA I+S S ++P+ + + TAF
Sbjct: 184 SADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPP 243
Query: 575 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+L +R L FFD GGDP+L+QHLF +F
Sbjct: 244 LIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLF 280
Score = 33.1 bits (72), Expect = 7.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FGHPEVYI+ LP G+++ ++
Sbjct: 277 FWLFGHPEVYIIFLPAAGMVATML 300
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 63.3 bits (147), Expect = 6e-09
Identities = 49/228 (21%), Positives = 82/228 (35%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NH D+G ++ A+L +P S + Y + T H
Sbjct: 28 NHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFA 87
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
L+P +LG+ D+A+PR++ F + +G +YP
Sbjct: 88 IPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYP 146
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+S + G + D + + IS+ S D++P++ +
Sbjct: 147 PLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALV 206
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
TA +L +R FF A GGD +L+QHLF +F
Sbjct: 207 TATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLF 254
Score = 35.1 bits (77), Expect = 1.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FGHPEVYI+ LP G IS I+
Sbjct: 251 FWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 10 NAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 355
N L+PL++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 70 LVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 60.1 bits (139), Expect = 6e-08
Identities = 52/232 (22%), Positives = 81/232 (34%), Gaps = 4/232 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG +Y +L PG + + +N + T HA
Sbjct: 28 DHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGV 87
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG* 349
N +PL++GA D+AFPR+N + ++ G G
Sbjct: 88 MPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGW 146
Query: 350 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 529
Y L+S G D L L GI + + ++P+FV
Sbjct: 147 FGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVW 206
Query: 530 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+T+ A+ +L+ DR +FF+ GG + YQHLF F
Sbjct: 207 TTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTF 258
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 627 FLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHII 746
F +L FY ++++ FGHPEVYILILP GIIS +I
Sbjct: 240 FEVLRGGSVVFYQHLFW-TFGHPEVYILILPAMGIISEVI 278
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 60.1 bits (139), Expect = 6e-08
Identities = 42/157 (26%), Positives = 62/157 (39%)
Frame = +2
Query: 215 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 394
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 395 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 574
+D + IS+ S +++P+FV AV + +F
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPP 224
Query: 575 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
A +L DR FF A GDPIL+QHLF F
Sbjct: 225 LVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFF 260
Score = 39.1 bits (87), Expect = 0.12
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI+ +P G++S II
Sbjct: 257 FWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 320 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 442
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 58.8 bits (136), Expect = 1e-07
Identities = 42/156 (26%), Positives = 63/156 (40%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 388
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 569 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 676
GA+ +L DR L+ FF GG+ ++Y +LF
Sbjct: 245 PILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLF 280
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
H F L Y+N+++ +GHPEVYIL+LP FGI S ++S
Sbjct: 263 HFFTAELGGNAMMYLNLFW-AWGHPEVYILVLPAFGIFSEVVS 304
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 58.4 bits (135), Expect = 2e-07
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 14/200 (7%)
Frame = +2
Query: 119 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 298
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 299 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 466
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 467 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP--- 637
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIY 277
Query: 638 -AG------GGDPILYQHLF 676
AG GG P+L+QHLF
Sbjct: 278 IAGEALHHQGGSPVLFQHLF 297
Score = 37.1 bits (82), Expect = 0.47
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F F GHPEVYI+++P GI S +I+
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVIA 321
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 58.4 bits (135), Expect = 2e-07
Identities = 58/214 (27%), Positives = 81/214 (37%), Gaps = 15/214 (7%)
Frame = +2
Query: 89 ELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 265
+LG PG+ D Y +T H N L+PL++GA D+ FP +N
Sbjct: 66 QLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFPYVN 125
Query: 266 NIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGI 436
+ + V G G G T+YPP + S + + L + SL L I
Sbjct: 126 MLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFII 185
Query: 437 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRN 613
+ +LPL V + T G++ +LL DR
Sbjct: 186 GFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRL 244
Query: 614 LNTSFFDPA----------GGGDPILYQHLFLIF 685
L TSFF P GGG P+L+QHLF F
Sbjct: 245 LGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFF 278
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYI+ LP FGI+S +IS
Sbjct: 275 FWFFGHPEVYIVALPAFGIVSDLIS 299
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 57.6 bits (133), Expect = 3e-07
Identities = 41/156 (26%), Positives = 61/156 (39%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 388
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 569 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 676
A+ +L DR L+ F GG+P++Y +LF
Sbjct: 244 PILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLF 279
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
H F L Y+N+++ +GHPEVYILILP FG+ S + S
Sbjct: 262 HIFTNELGGNPMMYVNLFW-AWGHPEVYILILPAFGVFSEVTS 303
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 56.4 bits (130), Expect = 7e-07
Identities = 53/229 (23%), Positives = 78/229 (34%), Gaps = 1/229 (0%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXX 178
N++ IG LY +L P L+G D YN I T H
Sbjct: 38 NNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLF 96
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVY 358
L+P +L A D+ FPR++ + G +Y
Sbjct: 97 AVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMY 155
Query: 359 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 538
PPL+ G + D + + IS+ S ++P+F A+
Sbjct: 156 PPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAML 215
Query: 539 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
I A A +L +R+ FF GGDP+L+QHLF F
Sbjct: 216 IFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFF 264
Score = 38.7 bits (86), Expect = 0.15
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI+ LP G++S I+
Sbjct: 261 FWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 56.4 bits (130), Expect = 7e-07
Identities = 37/157 (23%), Positives = 62/157 (39%)
Frame = +2
Query: 215 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 394
L+P +LGA D+ FPR++ + + + +G +YPPL++ G
Sbjct: 126 LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGL 183
Query: 395 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 574
D+ + L ++S + +PL+ V +
Sbjct: 184 GSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPP 243
Query: 575 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ +R + FFDP GGDP+L+QHLF IF
Sbjct: 244 LIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIF 280
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 56.0 bits (129), Expect = 9e-07
Identities = 49/228 (21%), Positives = 73/228 (32%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG LY +L P + YN ++T HA
Sbjct: 31 DHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFL 90
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N +PL LG D+A PR+N G T Y
Sbjct: 91 IPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYY 150
Query: 362 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 541
PL+ + G SV + L+ G+ S ++P+F ++
Sbjct: 151 PLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFA 208
Query: 542 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
T+ A + + L S F+P GG P+LYQ F +
Sbjct: 209 TSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFY 256
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 54.0 bits (124), Expect = 4e-06
Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 14/201 (6%)
Frame = +2
Query: 125 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 304
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 305 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 475
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 476 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----- 640
+F +LP+ + + ITA + + DR T FF P+
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVIN 269
Query: 641 ------GGGDPILYQHLFLIF 685
GGG P+L+QHLF +
Sbjct: 270 NAAPTVGGGQPLLWQHLFWFY 290
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +2
Query: 677 LIFWTS*SLYFNFTRIWYNFSYYFTRK 757
LIFWT SLYFNFT IWYNFSYYF K
Sbjct: 29 LIFWTPSSLYFNFTSIWYNFSYYFPSK 55
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 53.2 bits (122), Expect = 7e-06
Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 1/160 (0%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 385
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 386 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 565
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVWGFFTTAILMIIA 196
Query: 566 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
+ +R T FFD A GG P+L+Q LF F
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFF 236
Score = 41.5 bits (93), Expect = 0.022
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYILILP G++S ++
Sbjct: 233 FWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/157 (24%), Positives = 61/157 (38%)
Frame = +2
Query: 215 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 394
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 395 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 574
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 575 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
A +L +R + FF GGDP+L+QHLF F
Sbjct: 287 VILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFF 323
Score = 38.3 bits (85), Expect = 0.20
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI+ LP G++S I+
Sbjct: 320 FWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 51.2 bits (117), Expect = 3e-05
Identities = 41/159 (25%), Positives = 61/159 (38%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 388
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 569 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
L DR L+ FF GG+ + + ++F +F
Sbjct: 264 PPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLF 302
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
H F L ++N+++ FGHPEVYILILP FG+ S I S
Sbjct: 282 HFFTNGLGGNQMNFLNMFW-LFGHPEVYILILPAFGVYSEIFS 323
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FFGHPEVYILILPGFG+ISH+I+
Sbjct: 212 FXFFGHPEVYILILPGFGMISHVIA 236
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +2
Query: 611 NLNTSFFDPAGGGDPILYQHLFLIF 685
N T+FFDPAGGGD IL+QHLF F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFF 215
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +3
Query: 681 FFGHPEVYILILPGFGIISHIIS 749
FFGHPEVYILILPGFG+ISHI++
Sbjct: 2 FFGHPEVYILILPGFGMISHIVA 24
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 49.6 bits (113), Expect = 8e-05
Identities = 36/155 (23%), Positives = 61/155 (39%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 388
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 569 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHL 673
+ + DR L+T F+ GG +LY +L
Sbjct: 239 PILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINL 273
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHIIS 749
H + + YIN+ + +GHPEVYILILP FGI S IIS
Sbjct: 257 HFYSSFYGGQQMLYINLIW-AWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 49.2 bits (112), Expect = 1e-04
Identities = 53/241 (21%), Positives = 81/241 (33%), Gaps = 13/241 (5%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIG LY EL + G+ + YN V+ H
Sbjct: 21 NHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFI 80
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 361
N LVPL +GA D+AFPR+N + + G T+Y
Sbjct: 81 SPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYA 139
Query: 362 PLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 535
PL+ + I G + +L + + +P+F ++
Sbjct: 140 PLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSI 199
Query: 536 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLFLI 682
+T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 200 NLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWF 259
Query: 683 F 685
F
Sbjct: 260 F 260
Score = 33.9 bits (74), Expect = 4.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIIS 737
F FFGHPEVYI+ P G+++
Sbjct: 257 FWFFGHPEVYIVFFPALGVMA 277
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 49.2 bits (112), Expect = 1e-04
Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +2
Query: 344 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 514
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 515 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF F
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFF 399
Score = 40.7 bits (91), Expect = 0.038
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVY+LI+P FG I+ I+
Sbjct: 396 FWFFGHPEVYVLIIPTFGFINMIV 419
Score = 39.5 bits (88), Expect = 0.088
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 175
NHK I Y EL +P S GD Y +VTAH
Sbjct: 59 NHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFF 118
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 277
N L+P +G+ D+A+PR+N+I F
Sbjct: 119 VVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 48.0 bits (109), Expect = 3e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 671 LFLIFWTS*SLYFNFTRIWYNFSYYFTRK 757
L +IFW+S SLYFN IWYNF YY+T K
Sbjct: 3 LVMIFWSSSSLYFNSPSIWYNFPYYYTSK 31
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +2
Query: 506 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ +F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 526 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 630
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 45.6 bits (103), Expect = 0.001
Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 16/213 (7%)
Frame = +2
Query: 95 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 274
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 275 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 439
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 440 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 619
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 620 TSFFDPA-----------GGGDPILYQHLFLIF 685
TSFF P+ GGG +L+QHLF F
Sbjct: 254 TSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFF 286
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHII 746
F FFGHPEVYI ILP GI+SHI+
Sbjct: 283 FWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 45.6 bits (103), Expect = 0.001
Identities = 40/167 (23%), Positives = 64/167 (38%)
Frame = +2
Query: 209 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 388
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 569 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIFWTS*SLYF 709
A+ +L DR L T FF GG+ +LY +LF I W +YF
Sbjct: 263 PILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWI-WGHPEVYF 308
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +3
Query: 621 HHFLILLEEETQFYINIYF*FFGHPEVYILILPGFGIISHII 746
H F L Y N+++ +GHPEVY ++LP FG IS II
Sbjct: 281 HFFTAGLGGNLMLYTNLFW-IWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 681 FFGHPEVYILILPGFGIISHI 743
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.6 bits (103), Expect = 0.001
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 1/158 (0%)
Frame = +2
Query: 215 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 391
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 392 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 571
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 572 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLFLIF 685
G +LL ++ S++ GG +++++LF F
Sbjct: 231 EITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYF 267
Score = 35.9 bits (79), Expect = 1.1
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F +FGHPEVY+L+LPG G + +S
Sbjct: 264 FWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.004
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +1
Query: 253 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 432
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 433 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 612
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 613 LKY 621
KY
Sbjct: 199 PKY 201
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 696 EVYILILPGFGIISHIISQE 755
EVYILILPGFG+ISHIISQE
Sbjct: 155 EVYILILPGFGMISHIISQE 174
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.47
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 389 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 568
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 569 XXXAGAITILLTDRNLNT 622
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 1 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 84
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,098,927
Number of Sequences: 1657284
Number of extensions: 9959034
Number of successful extensions: 24063
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 22044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23776
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -