Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30379
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           32   0.023
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.49 
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    26   1.1  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   4.5  
DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary ...    24   6.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   6.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.9  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 0.023
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 405 MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
           +RT   LRGH + +  + W    + L S    G + VW
Sbjct: 54  LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVW 91


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -3

Query: 545 VHLVGRVAVPHDQLTILTGRHQVPGIAAPVHGVDLREMTAQGSSGAHLYATD 390
           V   GR +    ++ +L      P  + PV+ +D+ E    G+    L ATD
Sbjct: 489 VESAGRTSTAQIRVVVLDQNDNFPEFSQPVYDIDVPENVIAGTVLLQLQATD 540


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 424 CAVISRRSTPCTGAAIPGTWCRP 492
           CA ++    PCT   I G +C+P
Sbjct: 52  CADLNELQKPCTKQCIQGCFCKP 74


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +3

Query: 651 KTREGNVRVSRELPGHSGYLSCCR--FLDDNQ 740
           KT  GN+ +  +  G +G+LSCC   FL+D Q
Sbjct: 521 KTGTGNLLL--KTAGATGHLSCCNSLFLNDLQ 550


>DQ370044-1|ABD18605.1|   99|Anopheles gambiae putative salivary
           secreted peptide withTIL domain protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 454 CTGAAIPGTWCRP 492
           CTG  + G +CRP
Sbjct: 52  CTGVCVSGCFCRP 64


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 462  GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYA-PSGSYVACGGLDNICS 638
            G+DS N      + K +  ++     +   PLR  W   C +  PS + +     DNI  
Sbjct: 874  GADSEN------EAKQLCEETKAALAMGGFPLRK-WASNCPHILPSETEI-----DNIQR 921

Query: 639  IYSLKTREGNV 671
            +  LK+REG V
Sbjct: 922  VIELKSREGAV 932


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 156 RRSKGHC*QKDRCVACCTCAAR 221
           RRS  HC Q+ R  +C   AA+
Sbjct: 38  RRSSAHCTQQTRQASCSDNAAQ 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,104
Number of Sequences: 2352
Number of extensions: 16958
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)