Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30379
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 152 3e-37
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 152 3e-37
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 135 3e-32
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 55 5e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 1e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 50 2e-06
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 49 3e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 48 7e-06
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 47 1e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 47 2e-05
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 46 2e-05
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 46 3e-05
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 46 3e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 46 4e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 46 4e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 45 5e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 45 5e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 45 5e-05
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 45 5e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 45 5e-05
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 45 6e-05
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 45 6e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 45 6e-05
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 44 9e-05
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 44 9e-05
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 44 9e-05
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 43 2e-04
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 43 2e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 43 2e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 43 3e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 42 3e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 42 5e-04
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 42 6e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 0.001
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 40 0.001
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 40 0.002
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 40 0.002
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 40 0.002
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 40 0.002
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 39 0.003
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 39 0.003
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 39 0.003
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 39 0.003
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 39 0.003
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 39 0.004
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 39 0.004
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 39 0.004
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 38 0.006
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 38 0.006
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 38 0.006
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 38 0.007
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 38 0.010
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 38 0.010
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 38 0.010
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.013
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 37 0.017
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 37 0.017
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 36 0.023
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 36 0.023
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 36 0.023
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 36 0.030
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.030
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 36 0.030
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 36 0.030
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 36 0.039
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 36 0.039
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.039
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 35 0.052
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 35 0.052
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 35 0.052
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 34 0.091
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 34 0.091
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 34 0.091
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.091
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 34 0.091
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 34 0.091
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.12
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 34 0.12
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 34 0.12
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ... 34 0.12
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 34 0.12
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 33 0.16
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 33 0.16
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 33 0.16
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 33 0.16
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 33 0.21
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.21
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.21
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 33 0.21
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 33 0.28
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 33 0.28
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.28
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.28
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.37
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.37
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 32 0.37
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.37
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 32 0.49
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.49
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 32 0.49
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 32 0.49
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 31 0.64
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 31 0.64
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 31 0.64
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.85
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.85
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 31 1.1
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 31 1.1
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 31 1.1
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 30 1.5
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 30 1.5
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 30 1.5
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 30 2.0
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 30 2.0
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 29 2.6
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 29 2.6
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 29 2.6
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 2.6
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 2.6
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 29 2.6
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 29 2.6
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 29 2.6
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 29 3.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 3.4
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 29 3.4
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 29 3.4
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 29 3.4
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 29 3.4
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 29 3.4
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 29 3.4
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 3.4
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 29 3.4
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 29 4.5
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 4.5
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 29 4.5
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 4.5
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 28 6.0
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 6.0
At4g25250.1 68417.m03633 invertase/pectin methylesterase inhibit... 28 7.9
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 28 7.9
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 7.9
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 28 7.9
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 28 7.9
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 28 7.9
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 152 bits (368), Expect = 3e-37
Identities = 76/179 (42%), Positives = 113/179 (63%), Gaps = 10/179 (5%)
Frame = +3
Query: 264 VSIMNELDSLRQEA-ETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLR 428
VS + E ++ E L++ +R R DT +A+ ++ G + RTL+
Sbjct: 3 VSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQ 62
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
GH K+Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G V
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 609 ACGGLDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQXLTSFGDMTC 770
ACGGLD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D +TS GD TC
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 152 bits (368), Expect = 3e-37
Identities = 76/179 (42%), Positives = 113/179 (63%), Gaps = 10/179 (5%)
Frame = +3
Query: 264 VSIMNELDSLRQEA-ETLKNAIRDARKAACDTSLAQATS----NLEPIGRIQMRTRRTLR 428
VS + E ++ E L++ +R R DT +A+ ++ G + RTL+
Sbjct: 3 VSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRTLQ 62
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
GH K+Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G V
Sbjct: 63 GHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSV 122
Query: 609 ACGGLDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQXLTSFGDMTC 770
ACGGLD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D +TS GD TC
Sbjct: 123 ACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 181
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 569
R R RT GH + + + D + S DG ++D T +++
Sbjct: 235 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 294
Query: 570 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ 740
V + A++ SG + G +N C ++ E + + + H +SC D
Sbjct: 295 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 354
Query: 741 XL 746
L
Sbjct: 355 AL 356
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 135 bits (327), Expect = 3e-32
Identities = 59/115 (51%), Positives = 85/115 (73%), Gaps = 5/115 (4%)
Frame = +3
Query: 441 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 620
++Y++ W + +VSASQDG+LIVW++ T+ K HAI L +WVMTCA++P+G VACGG
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGG 64
Query: 621 LDNICSIYSLKT---REGNVRVSRELPGHSGYLSCCRFL--DDNQXLTSFGDMTC 770
LD++CSI+SL + ++G V VSR L GH GY+SCC+++ +D +TS GD TC
Sbjct: 65 LDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTC 119
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW-- 569
R R RT GH + + + D + S DG ++D T +++
Sbjct: 173 RAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGEN 232
Query: 570 --VMTCAYAPSGSYVACG-GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQ 740
V + A++ SG + G +N C ++ E + + + H +SC D
Sbjct: 233 GPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 292
Query: 741 XL 746
L
Sbjct: 293 AL 294
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +3
Query: 426 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 605
RGH+ +Y + W +DSR L+S S+D L +W+ T +P + V ++P G
Sbjct: 399 RGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEK 458
Query: 606 VACGGLDNICSIY 644
V GG D + ++
Sbjct: 459 VVSGGKDRVLKLW 471
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/116 (24%), Positives = 52/116 (44%)
Frame = +3
Query: 366 QATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 545
QA + P+ R +T+ GH + + + D + L S S D + +WD +T +
Sbjct: 90 QAVFRIRPVNRCS----QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLF 145
Query: 546 AIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLS 713
+WV+T A++P G ++ G I ++G + S L GH +++
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLVSGSKSG--EICCWNPKKGELEGS-PLTGHKKWIT 198
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/120 (19%), Positives = 54/120 (45%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 578
+ + ++ L GH + +++ D + + SAS D + +W+ T V V
Sbjct: 348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQ 407
Query: 579 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
+++ + G D+ I+ ++T+ ++ ++LPGH+ + + D + + S G
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWEIRTK----KLKQDLPGHADEVFAVDWSPDGEKVVSGG 463
Score = 34.7 bits (76), Expect = 0.069
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 453 MHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRS-SWVMTCAYAPSGSYVACGGLDN 629
+H S R V++S+DG +WD T K I L + +TC + G D
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWD--ITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQD- 261
Query: 630 ICSIYSLKTREGNVRVSRELPGHSGYLS 713
C+I +T +G ++ REL GH +++
Sbjct: 262 -CTIKMWETTQG--KLIRELKGHGHWIN 286
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Frame = +3
Query: 423 LRGHLAKIYAMHW-----GSDSRN----LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 575
LR H +IY + W G+++ N L SAS D + +WD+ + + V
Sbjct: 486 LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVY 545
Query: 576 TCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSF 755
+ A++P+G Y+A G LD I+S+K EG ++ + G+ G C + N+ F
Sbjct: 546 SLAFSPNGEYIASGSLDKSIHIWSIK--EG--KIVKTYTGNGGIFEVCWNKEGNKIAACF 601
Query: 756 GD 761
D
Sbjct: 602 AD 603
Score = 37.5 bits (83), Expect = 0.010
Identities = 28/118 (23%), Positives = 47/118 (39%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL H I+++ W L++ S D +VWD S + + +
Sbjct: 360 TLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNV 419
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGDMTCA 773
S+ A D++ IY K G R ++ GH G ++C ++ L S D + A
Sbjct: 420 SF-ATSSTDSM--IYLCKI--GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTA 472
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/66 (22%), Positives = 29/66 (43%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 581
+ R +T GH ++ + W L S S D +W+ + VH + + + T
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI 496
Query: 582 AYAPSG 599
++P+G
Sbjct: 497 RWSPTG 502
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-- 596
L+GH ++I + W SD+R L S D KL VW+ H+T V ++ V A++P
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 597 GSYVACGGLDNIC 635
G + GG + C
Sbjct: 348 GLLASGGGTADRC 360
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT-TNKVHAIPLRSSWVM 575
++ + RT+ GH ++ A+ W S L S S+D ++ D T + V + S +
Sbjct: 239 LRCKNIRTMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSKLKGHKSEIC 296
Query: 576 TCAYAPSGSYVACGGLDN 629
++ +A GG DN
Sbjct: 297 GLKWSSDNRELASGGNDN 314
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +3
Query: 459 WGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNI 632
W + LVS ++IVW T +K+ + S V+ A +P G + G D
Sbjct: 386 WSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDET 445
Query: 633 CSIYSL 650
+++
Sbjct: 446 LRFWNV 451
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 363 AQATSNLEPIGRIQM----RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT 530
A +T N G + + R +TL GH A I + + +D L SAS D +I+W +
Sbjct: 15 ANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATN 74
Query: 531 TNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 710
+ +H SS + A++ S S+ C D+ C++ R + L GH+ ++
Sbjct: 75 YSLIHRYEGHSSGISDLAWS-SDSHYTCSASDD-CTLRIWDAR-SPYECLKVLRGHTNFV 131
Query: 711 SCCRFLDDNQXLTS 752
C F + + S
Sbjct: 132 FCVNFNPPSNLIVS 145
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+ LRGH ++ +++ S +VS S D + +W+ T V I S + + +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 181
Query: 597 GSYVACGGLDNICSIYSLK 653
GS + D C I+ K
Sbjct: 182 GSLIVSASHDGSCKIWDAK 200
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 578
+Q + + H + + + DS L S SQDGK+ +W T + S V +
Sbjct: 251 LQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTS 310
Query: 579 CAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD-NQXLTSF 755
+++ GS + D I+ LK+ ++ +E GH+ Y++ F D ++ +T+
Sbjct: 311 LSFSRDGSQLLSTSFDQTARIHGLKSG----KLLKEFRGHTSYVNHAIFTSDGSRIITAS 366
Query: 756 GDMT 767
D T
Sbjct: 367 SDCT 370
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 536
+ RGH + + + SD +++AS D + VWDS TT+
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 380
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG- 599
L+GH I +HW SD +VSAS D + WD T ++ + SS+V +C G
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 600 SYVACGGLDNICSIYSLKTR 659
+ G D ++ ++ R
Sbjct: 152 PLIISGSDDGTAKLWDMRQR 171
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHT---TNKV------HAIPLRSSWV 572
TL GH I M D L++ D KL VWD N+ H + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN-L 275
Query: 573 MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+ C+++P G+ V G D + I+ +R R +LPGH+G ++ C F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSR----RTIYKLPGHTGSVNECVF 322
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/93 (20%), Positives = 38/93 (40%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 659
++S S DG +WD + P + + +++ + + GG+DN ++ L+
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRKG 212
Query: 660 EGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
E + L GH ++ D L + G
Sbjct: 213 EATM----TLEGHQDTITGMSLSPDGSYLLTNG 241
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 459 WGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV-ACGGLDNI 632
W D + + S D + +WD+ + ++ +P + V C + P+ + +C NI
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNI 338
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/86 (18%), Positives = 34/86 (39%)
Frame = +3
Query: 441 KIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGG 620
+I A+ + + + + D + VWD + + + +P GSY+ G
Sbjct: 182 QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 621 LDNICSIYSLKTREGNVRVSRELPGH 698
+DN ++ ++ R + GH
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGH 267
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK-VHAIPLRSSWVMTCAYAPSG 599
L GH + +Y M + + S S D ++ +W H K + + ++ + G
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCC 719
S + D + ++T + +++ HS ++ SCC
Sbjct: 109 SQIVSASPDKTVRAWDVETG----KQIKKMAEHSSFVNSCC 145
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 536
LA A+S + + ++ + R GH + A+ + L S S D L +WD
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 537 KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
+ S + T + P G +V GGLDN+ ++ L
Sbjct: 134 CIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/113 (23%), Positives = 52/113 (46%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
+L GH + + ++ + S +++ + G + +WD V A S + P G
Sbjct: 53 SLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFG 112
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
++A G D I+ ++ ++G ++ + GHS +S RF D + + S G
Sbjct: 113 EFLASGSSDANLKIWDIR-KKGCIQTYK---GHSRGISTIRFTPDGRWVVSGG 161
Score = 35.5 bits (78), Expect = 0.039
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+T +GH I + + D R +VS D + VWD +H + + + P
Sbjct: 136 QTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPL 195
Query: 597 GSYVACGGLDNICSIYSLKTRE--GNVRVS----RELPGHSGYLSCCRFLDDNQXLTSFG 758
+A G D + L+T E G+ R R + H + LDD+ + S+
Sbjct: 196 EFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLDDSLKVYSWE 255
Query: 759 DMTC 770
+ C
Sbjct: 256 PVVC 259
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
R GH + A+ + L S S D L VWD+ + + + T ++P
Sbjct: 43 RAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Query: 597 GSYVACGGLDNICSIYSL 650
G +V GGLDN+ ++ L
Sbjct: 103 GRWVVSGGLDNVVKVWDL 120
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/113 (20%), Positives = 52/113 (46%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
+L GH + + ++ + S+ +++ + G + +WD + V A S + P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
++A G D ++ + ++G ++ + GH+ +S F D + + S G
Sbjct: 62 EFLASGSSDTNLRVWDTR-KKGCIQTYK---GHTRGISTIEFSPDGRWVVSGG 110
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+T +GH I + + D R +VS D + VWD +H + + + P
Sbjct: 85 QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL 144
Query: 597 GSYVACGGLDNICSIYSLKTRE 662
+A G D + L+T E
Sbjct: 145 EFLLATGSADRTVKFWDLETFE 166
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
L + S D + WD T + ++ V A+ P G + C GLD+ +YS
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFC-GLDDGLKVYS 202
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +3
Query: 270 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 440
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 441 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 614
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 615 GGLDNICSIYSLK 653
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 46.0 bits (104), Expect = 3e-05
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Frame = +3
Query: 270 IMNELDSLRQEAETLK---NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 440
I+N DS+R+ L+ N A+ D S T L + I M R GH
Sbjct: 208 IINFADSVRRRCSVLQWNPNVTTQIMVASDDDS--SPTLKLWDMRNI-MSPVREFTGHQR 264
Query: 441 KIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS-GSYVAC 614
+ AM W SDS L++ ++D + I WD++T V +P ++W + P ++
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYPKIPGVISA 324
Query: 615 GGLDNICSIYSLK 653
D IY+++
Sbjct: 325 SSFDGKIGIYNIE 337
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/90 (30%), Positives = 40/90 (44%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 603 YVACGGLDNICSIYSLKTREGNVRVSRELP 692
+V GG D + L TRE + ++E P
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHP 340
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +3
Query: 426 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 605
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 606 VACGGLDNICSIYSL 650
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/90 (30%), Positives = 40/90 (44%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
LRGH + + S R +S S D + +WD +H + + V A PS S
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 603 YVACGGLDNICSIYSLKTREGNVRVSRELP 692
+V GG D + L TRE + ++E P
Sbjct: 311 HVYSGGRDQCLYLTDLATRESVLLCTKEHP 340
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +3
Query: 426 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 605
+GH +YA+ LVS + L VWD T +K + + V +G +
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 606 VACGGLDNICSIYSL 650
G D++ ++ L
Sbjct: 270 CLSGSSDSMIRLWDL 284
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 588 APSGSYVACGGLDNICSIYSLK 653
P YVA D C IY+ K
Sbjct: 104 DPLAKYVASLSSDRTCRIYANK 125
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 588 APSGSYVACGGLDNICSIYSLK 653
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ ++L H + + W D L+S S D I+WD + + + +V A+
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 588 APSGSYVACGGLDNICSIYSLK 653
P YVA D C IY+ K
Sbjct: 163 DPLAKYVASLSSDRTCRIYANK 184
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM 575
R+Q L GH +++ + W D R L S D +L+VW++H+ + + ++ V
Sbjct: 285 RVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVK 344
Query: 576 TCAYAP-SGSYVACGG 620
++P S +A GG
Sbjct: 345 AITWSPHQSSLLASGG 360
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP--S 596
L GH +++ + W D+R L S D +L VW+ H+T V ++ V A++P
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 597 GSYVACGGLDNIC 635
G + GG + C
Sbjct: 391 GLLASGGGTADRC 403
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCAYAP 593
RT+ GH ++ A+ WGS L S S+D ++ D + V + S V ++
Sbjct: 288 RTMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSY 345
Query: 594 SGSYVACGGLDN 629
+A GG DN
Sbjct: 346 DNRELASGGNDN 357
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +3
Query: 438 AKIYAMHWGSDSRNLVSAS--QDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 611
+++ + W + LVS ++IVW T +K+ + + V+ A +P G +
Sbjct: 422 SQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIV 481
Query: 612 CGGLDNICSIYSL 650
G D +++
Sbjct: 482 TGAGDETLRFWNV 494
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/102 (24%), Positives = 47/102 (46%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
R GH + + ++ D R + S +DG +++WD T + + +S V + +Y+
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGE 594
Query: 597 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCR 722
GS +A G D ++ + T + + E G+S L R
Sbjct: 595 GSLLASGSADCTVKLWDV-TSSTKLTKAEEKNGNSNRLRSLR 635
Score = 41.9 bits (94), Expect = 5e-04
Identities = 34/133 (25%), Positives = 55/133 (41%)
Frame = +3
Query: 372 TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 551
T+ + + RIQ R + GHL+ + W + + + S D + +WD T V
Sbjct: 483 TARIWSMDRIQ--PLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 537
Query: 552 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 731
S V++ A +P G Y+A G D ++ L T R L GH+ + +
Sbjct: 538 IGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST----ARCITPLMGHNSCVWSLSYSG 593
Query: 732 DNQXLTSFGDMTC 770
+ L S G C
Sbjct: 594 EGSLLAS-GSADC 605
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/96 (21%), Positives = 40/96 (41%)
Frame = +3
Query: 363 AQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 542
A+ S+ + IG R+ L GH +Y+ + ++S+S D + +W + +
Sbjct: 394 AENDSSDQSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANL 453
Query: 543 HAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
+ V ++P G Y A D I+S+
Sbjct: 454 VCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM 489
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 44.8 bits (101), Expect = 6e-05
Identities = 32/150 (21%), Positives = 57/150 (38%)
Frame = +3
Query: 276 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 455
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 143 NAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE--EAKVVRTLTGHRSNCVSV 200
Query: 456 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 635
++ S S D L +WD +H + V + P G ++ GG DN+
Sbjct: 201 NFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVV 260
Query: 636 SIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
++ L ++ E H G + F
Sbjct: 261 KVWDLTAG----KLLHEFKSHEGKIQSLDF 286
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T +GH + + + D R +VS +D + VWD +H + + + P
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 600 SYVACGGLDNICSIYSLKTRE 662
+A G D + L+T E
Sbjct: 291 FLLATGSADKTVKFWDLETFE 311
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 426 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 605
+ H KI ++ + L + S D + WD T + + ++ V + P G
Sbjct: 275 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKS 334
Query: 606 VACGGLDNICSIYS 647
V C GL I+S
Sbjct: 335 VLC-GLQESLKIFS 347
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +3
Query: 351 DTSLAQATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
D +LA A+ L+ + R+ +RT R++ +GH+ ++++++ + +L S +D + +W
Sbjct: 392 DGALA-ASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Query: 519 DSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYS 647
D ++ IP ++ V Y P G ++A D +I+S
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
GH +Y + + D S D VWD T + V + ++P+G ++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 609 ACGGLDNICSIYSLKTRE 662
A GG DN C I+ L+ R+
Sbjct: 439 ASGGEDNQCRIWDLRMRK 456
Score = 34.7 bits (76), Expect = 0.069
Identities = 20/80 (25%), Positives = 38/80 (47%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+T GHL ++ + + + L + S D +WD +T ++ S V A+
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQD 392
Query: 597 GSYVACGGLDNICSIYSLKT 656
G+ A GLD++ ++ L+T
Sbjct: 393 GALAASCGLDSLARVWDLRT 412
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/150 (22%), Positives = 56/150 (37%)
Frame = +3
Query: 276 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 455
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 456 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 635
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 636 SIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
++ L ++ E H G + F
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDF 193
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T +GH + + + D R +VS +D + VWD + + + + P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 600 SYVACGGLDNICSIYSLKTRE 662
+A G D + L+T E
Sbjct: 198 FLLATGSADRTVKFWDLETFE 218
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/150 (22%), Positives = 56/150 (37%)
Frame = +3
Query: 276 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 455
N + SL + + + DA + A T L + + + RTL GH + ++
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE--EAKIVRTLTGHRSNCISV 107
Query: 456 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNIC 635
+ S S D L +WD +H + V + P G +V GG DNI
Sbjct: 108 DFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIV 167
Query: 636 SIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
++ L ++ E H G + F
Sbjct: 168 KVWDLTAG----KLLTEFKSHEGQIQSLDF 193
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T +GH + + + D R +VS +D + VWD + + + + P
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 600 SYVACGGLDNICSIYSLKTRE 662
+A G D + L+T E
Sbjct: 198 FLLATGSADRTVKFWDLETFE 218
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 44.4 bits (100), Expect = 9e-05
Identities = 30/115 (26%), Positives = 58/115 (50%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
L+GH +++ + S R +++A+ DG + +WD T V + SS +++ Y S
Sbjct: 935 LKGHDSQVSCVKMLSGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 603 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGDMT 767
+A G D + +I+ + R G + +L GH+ ++ R ++D +T D T
Sbjct: 994 ILAAAGRDTVANIWDI--RSG--KQMHKLKGHTKWIRSIRMVEDT-LITGSDDWT 1043
Score = 29.5 bits (63), Expect = 2.6
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 12/162 (7%)
Frame = +3
Query: 318 NAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGS---------- 467
N+ RK D + + T+ + +IQ R L+GH + A+H +
Sbjct: 807 NSFSRVRKWVSDNASSDITAAAQK--KIQTNVR-VLKGHGGAVTALHSVTRREVCDLVGD 863
Query: 468 --DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSI 641
D+ +S S D + +WD L+ A + + G D +
Sbjct: 864 REDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIV 923
Query: 642 YSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGDMT 767
+ +T + + EL GH +SC + L + LT+ D T
Sbjct: 924 WDKQTTQ----LLEELKGHDSQVSCVKMLSGERVLTAAHDGT 961
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/108 (25%), Positives = 48/108 (44%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
GH I + + SD+R +VSAS D L +WD T + + + +++ + P + +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 609 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTS 752
G D I+ + T + + LP HS ++ F D + S
Sbjct: 129 VSGSFDETVRIWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVS 172
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+TL GH + +++ S +VS S D + +WD T + +P S V +
Sbjct: 107 KTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Query: 597 GSYVACGGLDNICSIYSLKT 656
GS + D +C I+ T
Sbjct: 167 GSLIVSSSYDGLCRIWDSGT 186
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA-IPLRSSWVMTCAYAP 593
+ L H + A+ + D +VS+S DG +WDS T + V I + V ++P
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 594 SGSYVACGGLDNICSIYSLKT 656
+G ++ G LDN ++++ +
Sbjct: 209 NGKFILVGTLDNTLRLWNISS 229
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWG---SDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+T GH+ Y + ++ + +VS S+D + +W+ ++ + + + VM A
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC 293
Query: 588 APSGSYVACGGLDNICSIYSLK 653
P+ + +A G LD I++ K
Sbjct: 294 HPTENLIASGSLDKTVRIWTQK 315
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 593
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 386 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 444
Query: 594 SGSYVACGGLDNI-CSIYSLKTRE-GNVRVSRELPGH 698
SG V G LD+ ++S KT + ++ E P H
Sbjct: 445 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVH 481
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
L GH A ++ + + ++ L S+S D + +WD + + V+T A+ P G
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 603 YVACGGLD 626
+A LD
Sbjct: 533 QLASSTLD 540
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMTCAYAP 593
T H + A+H+ +D+ +L+SAS DG + WD + K + P +V A P
Sbjct: 426 TFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTA-DP 484
Query: 594 SGSYVACGGLDNI-CSIYSLKTRE-GNVRVSRELPGH 698
SG V G LD+ ++S KT + ++ E P H
Sbjct: 485 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVH 521
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
L GH A ++ + + ++ L S+S D + +WD + + V+T A+ P G
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 603 YVACGGLD 626
+A LD
Sbjct: 573 QLASSTLD 580
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSY 605
GH + I + W + NL SA +DG+L++WD+ T H + + V ++ P +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEW 274
Query: 606 V-ACGGLDNICSIYSLK 653
V A D+ +++ L+
Sbjct: 275 VLATASSDSTVALFDLR 291
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +3
Query: 237 VPRELCVTRVSIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTR 416
+P+ R+ + E++ R + K + A+ + C+ L + +
Sbjct: 104 IPKVEIRQRIRVDGEVNRARCMPQ--KPTLVGAKTSGCEVFLFDYAKHAAKSQTSECDPD 161
Query: 417 RTLRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT 533
L GH + Y + W L+S SQD K+ +WD T
Sbjct: 162 LRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSAT 201
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +3
Query: 411 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK--VHAIPLRSSWVMTCA 584
TRR + GH + ++ + +D+R +VSAS+D + +W++ K + WV
Sbjct: 98 TRRFV-GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVR 156
Query: 585 YAPSGSY--VACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
++P+ + D +++L+ N ++ L GHSGYL+ D S G
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQ----NCKLRNTLAGHSGYLNTVAVSPDGSLCASGG 212
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = +3
Query: 414 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
+R + GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFST 115
Query: 594 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+ D +++ E +S E GH ++SC RF
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EADGHKEWVSCVRF 157
Score = 35.9 bits (79), Expect = 0.030
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ R TL GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 588 APSGSYVACGGLDNICSIYSLKTR 659
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
+VSAS D + VW+ + + S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +3
Query: 411 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNK--VHAIPLRSSWVMTCA 584
T R GH + ++ + +D+R +VSAS+D + +W++ K + WV
Sbjct: 97 TTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVR 156
Query: 585 YAPSG--SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
++P+ + D +++L+ N ++ L GHSGYL+ D S G
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQ----NCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/104 (25%), Positives = 45/104 (43%)
Frame = +3
Query: 414 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
+R L GH + + SD + +S S DG+L +WD T + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFST 115
Query: 594 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+ D +++ E +S E GH ++SC RF
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTIS-EGDGHKEWVSCVRF 157
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
+VSAS D + VW+ +++ S ++ T A +P GS A GG D + ++ L
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/84 (21%), Positives = 40/84 (47%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ R +L GH + + D S +DG +++WD K++++ S + + +
Sbjct: 184 KLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-AGSIIHSLCF 242
Query: 588 APSGSYVACGGLDNICSIYSLKTR 659
+P+ Y C +N I+ L+++
Sbjct: 243 SPN-RYWLCAATENSIRIWDLESK 265
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHW-GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
RT GH + AM W SDS L++ +D + I W++ T V +P +W + P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 594 S-GSYVACGGLDNICSIYSLK 653
++ +D IY+L+
Sbjct: 306 KMPGVISASSVDGKIGIYNLE 326
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TLRGH A + ++W D L S S D + +W+ T + S V + P G
Sbjct: 113 TLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIG 172
Query: 600 SYVACGGLDNICSIY 644
S++A D I+
Sbjct: 173 SFIASQSDDKTVIIW 187
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPLRSSWVMTCA 584
LRGHL+ + + W + S S D +I+W +H T+ A L S++
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRLG 215
Query: 585 YAPSGSYV 608
++P G ++
Sbjct: 216 WSPCGHFL 223
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 426 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
R H+ + I ++ + +D L + +DG L ++D T V + ++ CA++ G
Sbjct: 298 RWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDG 357
Query: 600 SYVACGGLDNICSIYSLKTRE 662
Y+ GG D++ ++S++ R+
Sbjct: 358 KYLLTGGEDDLVQVWSMEDRK 378
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCA 584
R R TL GH K+ A+ SR++VSA+ D + +WD H + + S+ C
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC- 364
Query: 585 YAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL-SCCRFLDDNQXLTSFGD 761
+ G V G +D ++ ++T ++ E+ GHS + S + N+ LTS D
Sbjct: 365 LSIDGLTVFSGHMDGNLRLWDIQTG----KLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D + S DG L +WD T + + SS V + + + +G+ + G DN+ +++
Sbjct: 368 DGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 427
Query: 648 LKTRE--GNVRVSRELPGHSGYLSCCRFLDD 734
+T E G +R S + SC DD
Sbjct: 428 TRTLEICGTLRASGNRLASNWSRSCISPDDD 458
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSY 605
G+ I+++ + +D R +V+ S D + V+D +S V T +A SG+
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 606 VACGGLDNICSIYSLKTREGNVRVSRELPGH 698
+ G DN+C ++ + G + + L GH
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGH 317
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
LRGH ++ + + + LVS+S+D L VWD T + + + S V + P
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 603 YVACGGLDNICSIYSLKTREGN 668
YV G D Y++K N
Sbjct: 204 YVVTGSADQELRFYAVKEYSSN 225
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +3
Query: 414 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
+ TL GH + A+ W D R +++ + + WD + + VH ++C + P
Sbjct: 312 KHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYP 371
Query: 594 SGSYVACGGLDNICSIYSLKTRE 662
G + G D ++ L RE
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGRE 394
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
L GH + ++ + D R L S S DG + + D+ + ++ +SWV++ +P G
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 600 SYVACGGLDNICSIYSLKTR 659
+A G D ++ LK R
Sbjct: 256 GAIATGSSDRTVRLWDLKMR 275
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 567 WVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHS 701
+V++ A++P+G +ACG +D ++ + ++ +L GH+
Sbjct: 160 FVLSVAWSPNGKRLACGSMDGTICVFDV----DRSKLLHQLEGHN 200
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 584
TL GH ++ + W L S S DG++I+W N + H V + A
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 585 YAPS--GSYVACGGLDNICSIYSLKTREG 665
+AP G +ACG D S++S + G
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGG 139
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRN--LVSASQDGKLIVWDSHTTN---KVHAIPLRSSWVMTCA 584
TL GH ++ + W L S S DG++I+W N + H S V + A
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 585 YAPS--GSYVACGGLDNICSIYSLKTREG 665
+AP G +ACG D S+++ + G
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGG 139
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Frame = +3
Query: 393 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLV-SASQDGKLIVWD-SHTTNKVHAIPLRSS 566
G + +R + +GH+ + W ++ V ++S+DG L +WD ++ ++ I + +
Sbjct: 264 GDMYIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLA 323
Query: 567 W-----VMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLD 731
V TCA+ G +A G D I+SLK G+ H+ ++ +F
Sbjct: 324 RPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSS 383
Query: 732 DNQXLTS 752
D + L S
Sbjct: 384 DGRILLS 390
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 426 RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 521
+ H I ++ + SD R L+S S DG L VWD
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +3
Query: 366 QATSNLEPIGRI-QMRTRRTL---RGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
+A+S + + R+ +RT R + +GH+ ++ ++ + + +L S +D + +WD
Sbjct: 145 KASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMR 204
Query: 534 NKVHAIPLRSSWVMTCAYAPSGSY-VACGGLDNICSIYS 647
++ IP + V Y P Y +A D +I+S
Sbjct: 205 KLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 486 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTRE 662
S+ D VWD T + V++ ++P+G ++A GG DN C I+ L+ R+
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +3
Query: 312 LKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIY--AMHWGSDSRNLV 485
++N + +A +S TS +P G I M+ R ++ A G +
Sbjct: 579 MENTVDNASSGTASSSQNDRTS-YQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIA 637
Query: 486 SASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYA-PSGSYVACGGLDNICSIYS 647
S S DG+ +W+ T ++ + + V+ C P S VA G+DN I+S
Sbjct: 638 SGSDDGRWFIWEKQ-TGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWS 691
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 551
++ + L GH + A+ W S+ L+S S D ++ +W+ + +H+I
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSI 88
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 600 SYVACGGLDNICSIYSL 650
Y+ GG + I ++ L
Sbjct: 115 KYLITGGFEKILRVFDL 131
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYSLKT 656
LVS S D K+ VW + V I ++++ + Y P S +Y+A G D+ Y L+
Sbjct: 479 LVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 657 REGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGDMT 767
+ V GH +S +FL +N+ ++ D T
Sbjct: 538 ISQPLHV---FSGHKKAVSYVKFLSNNELASASTDST 571
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/102 (20%), Positives = 43/102 (42%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
++R K+ H+ SD + L SA D K ++W + T + ++ + ++PS
Sbjct: 646 SVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQ 705
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+A D ++ + ++R GHS ++ F
Sbjct: 706 LRLATSSFDKTVRVWDADNKGYSLRT---FMGHSSMVTSLDF 744
Score = 31.5 bits (68), Expect = 0.64
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRT-RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 536
LA +++NL + ++ + R +L+GH I ++ W L S S+D + VW T +
Sbjct: 792 LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGS 850
Query: 537 K---VHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 707
+ VH + + +C + P+ + G ++++ + + LP H G
Sbjct: 851 EGECVHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENK-----TMTLPAHEGL 905
Query: 708 LS 713
++
Sbjct: 906 IT 907
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL GH+ ++ + + + SA D ++ WD + + S V A P+
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 600 SYVACGGLDNICSIYSLKTR 659
+ GG D++C ++ ++T+
Sbjct: 273 DVLLTGGRDSVCRVWDIRTK 292
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 581
Q + R+ GHL+ +Y + L++ +D VWD T ++ A+ + V +
Sbjct: 249 QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV 308
Query: 582 AYAPSGSYVACGGLDNICSIYSLK 653
P+ V G D + L+
Sbjct: 309 FTRPTDPQVVTGSHDTTIKFWDLR 332
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 38.3 bits (85), Expect = 0.006
Identities = 28/116 (24%), Positives = 48/116 (41%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL GH+ ++ + + + SA D ++ WD + + V A P+
Sbjct: 207 TLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTL 266
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGDMT 767
V GG D++C ++ ++T+ + V LP S S D Q +T D T
Sbjct: 267 DVVLTGGRDSVCRVWDIRTKM-QIFV---LPHDSDVFSVLARPTDPQVITGSHDST 318
Score = 31.1 bits (67), Expect = 0.85
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 581
Q + R+ GHL +Y + +++ +D VWD T ++ +P S V +
Sbjct: 243 QNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSV 301
Query: 582 AYAPSGSYVACGGLDNICSIYSLK 653
P+ V G D+ + L+
Sbjct: 302 LARPTDPQVITGSHDSTIKFWDLR 325
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 426 RGHLAK--IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
R H+ + I ++ + +D +L + +DG L ++D T V ++ C+++ G
Sbjct: 298 RWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDG 357
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 737
Y+ GG D++ ++S++ R +V GH+ ++S F D N
Sbjct: 358 KYILTGGEDDLVQVWSMEDR----KVVAWGEGHNSWVSGVAF-DSN 398
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 557
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 253 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 312
Query: 558 RSSWVMTCAYAP-SGSYVACGG 620
+S V A+ P + +A GG
Sbjct: 313 HTSAVKALAWCPFQANLLATGG 334
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 557
RI+ T RGH ++ + W + L S D + +WD + TT +H +
Sbjct: 243 RIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEE 302
Query: 558 RSSWVMTCAYAP-SGSYVACGG 620
+S V A+ P + +A GG
Sbjct: 303 HTSAVKALAWCPFQANLLATGG 324
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 393 GRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 545
GR+ ++ +L GH +++ M W L S DG + +W S+ + H
Sbjct: 266 GRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSNLNGEWH 316
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.1 bits (82), Expect = 0.013
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = +3
Query: 453 MHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR-------SSWVMTCAYAPSGSYVA 611
MHW VS+ + K I W S K H + LR S + A + G Y+A
Sbjct: 186 MHWD------VSSGKTDKYI-WPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 238
Query: 612 CGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
GG+D I+ ++TRE +V+ PGH +SC F
Sbjct: 239 TGGVDRHVHIWDVRTRE-HVQA---FPGHRNTVSCLCF 272
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-----TTNKVHAIPLRSSWVMTCAY 587
L+GH + A + D ++ +D + +W+ H T K H +R V
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVT---- 69
Query: 588 APSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
+ + + +CGG D +Y G RV R+ GH G ++ +F D + + S G
Sbjct: 70 SDNAKFCSCGG-DR--QVYYWDVSTG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD--SHTTNKVHAIPLRSSWVMT 578
R R RGH ++ A+ + S +VSA D L VWD SH+ V I VM+
Sbjct: 93 RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMS 151
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+T + H ++ +H SD+ S D ++ WD T + V + S
Sbjct: 54 KTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDS 113
Query: 597 GSYVACGGLDNICSIYSLKT 656
S V G D ++ ++
Sbjct: 114 SSVVVSAGFDRSLRVWDCRS 133
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T GH +++ ++ SAS D +W++ T +++H+ V CA++
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDT 109
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL-DDNQXLTSFGD 761
+ GG++ I I+ L + +E+ G + +L DN L+S D
Sbjct: 110 HRLLTGGMEKILRIFDLNRPDA---PPKEVGNSPGSIRTVEWLHSDNTILSSCTD 161
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL GHL I + + ++ +VSAS D + +W+ + + + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 600 SYVACGGLDNICSIYSL 650
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 728
+ +A G DN ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DNGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQ-DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
T GH ++YA+ LV+ D K +W + +P V A++
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 597 GSYVACGGLDNICSIYSLKTREGNVRVSRELPG 695
G +A GGLD + I+ + G ++ + PG
Sbjct: 125 GQLLASGGLDGVVQIFDASS--GTLKCVLDGPG 155
Score = 34.3 bits (75), Expect = 0.091
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 534 NKVHAIPLRSSWVMTCAYAPS-GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYL 710
+ VH + A +P+ + VA GG D+ ++ + GN + ELPGH +
Sbjct: 61 DSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKI----GNGDWAAELPGHKDSV 116
Query: 711 SCCRFLDDNQXLTSFG 758
SC F D Q L S G
Sbjct: 117 SCLAFSYDGQLLASGG 132
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI---PLRSSWVMTCAYAPSG 599
GH + + D + + + S D LIVW+ T +H + P + +TC S
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG-LTCLDINSN 253
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
S +A G + S++ + G +V L H+ + C +F
Sbjct: 254 SSLAISGSKD-GSVHIVNIVTG--KVVSSLNSHTDSVECVKF 292
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT 578
+Q T R + H + ++ W S+ L + +G + +WDS N VH V
Sbjct: 316 LQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQA 375
Query: 579 CAYAPSGSYVACGGLDNICSIY 644
+ + + ++ +DN ++
Sbjct: 376 ISVSTNTDFIVSVSVDNTARVF 397
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 36.3 bits (80), Expect = 0.023
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVM-TCAYAPSGSYV 608
HL + + + ++R V++S D L VW+ + I M + + P+G+++
Sbjct: 411 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 470
Query: 609 ACGGLDNICSIYSLKTREGNVRVSRELPGH--SGYLSCCRFLDDNQXLTSFGD 761
A LDN IYS + R + + GH +GY F D + + S GD
Sbjct: 471 AAQSLDNQILIYSTRER-FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS-GD 521
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAP 593
RT GH + + + +D ++A D + WD+ T + + +V+
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 594 SGSYVACGGL-DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGD 761
+ G+ D + + T E V++E H G ++ F+D+N+ + D
Sbjct: 380 DKQNILLAGMSDKKIVQWDINTGE----VTQEYDQHLGAVNTITFVDNNRRFVTSSD 432
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+L GH A Y M + R +SA DGK IVWD + + ++ ++P
Sbjct: 581 SLTGHTASTYVMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPD 640
Query: 597 GSYVACGGLDNICSIYSLKTREGN 668
G+ + D++ +Y L T +G+
Sbjct: 641 GTSIILS--DDVGQLYILSTGQGD 662
Score = 31.9 bits (69), Expect = 0.49
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 5/134 (3%)
Frame = +3
Query: 384 EPIGRIQ-MRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLR 560
+P +Q M+ + LRGH +Y R +++ S D + VW T + +
Sbjct: 227 KPSSMVQKMQNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGH 286
Query: 561 SSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL---- 728
+ A + + ++A D + ++ L + VS L GH+G ++ F
Sbjct: 287 EGDITDLAVSSNNIFIASASNDCVIRVWRL---PDGLPVS-VLRGHTGAVTAIAFSPRPG 342
Query: 729 DDNQXLTSFGDMTC 770
Q L+S D TC
Sbjct: 343 SPYQLLSSSDDGTC 356
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
H + I A W S +L+SAS DGK+++WD T + I + V++ + G V
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWW-KGESV 415
Query: 609 ACGGLDNICSIYS 647
GG D+ I S
Sbjct: 416 VSGGADSNLRISS 428
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW--VMTC 581
+T TL GHL +A W D + +QD VWD +K A+ LR + + +
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAV-LRGNLGAIRSI 366
Query: 582 AYAPSGSYVACGGLDNICSIYSL 650
Y G Y+A + +Y +
Sbjct: 367 RYTSDGKYMAMAEPADFVHVYDV 389
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 35.9 bits (79), Expect = 0.030
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 411 TRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTC 581
TRR + GH + ++ + D+R +VSAS+D + +W++ K WV
Sbjct: 98 TRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV 156
Query: 582 AYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSF 755
++P+ + D +++L N ++ L GH+GY+S D S
Sbjct: 157 RFSPNTLQPTIVSASWDKTVKVWNL----SNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 212
Query: 756 G 758
G
Sbjct: 213 G 213
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/104 (23%), Positives = 43/104 (41%)
Frame = +3
Query: 414 RRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
+R L GH + + SD + +S S DG+L +WD + V++ A++
Sbjct: 56 QRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Query: 594 SGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+ D +++ E +S GH ++SC RF
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRF 158
Score = 34.7 bits (76), Expect = 0.069
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
+VSAS D + VW+ + + +V T A +P GS A GG D + ++ L
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY 587
+ R TL GH + + D S +DG +++WD K++++ S C +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC-F 243
Query: 588 APSGSYVACGGLDNICSIYSLKTR 659
+P+ Y C ++ I+ L+++
Sbjct: 244 SPN-RYWLCAATEHGIKIWDLESK 266
Score = 32.7 bits (71), Expect = 0.28
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSHTTNKVHAIPLR-----SSWVMTC 581
T+R H + A+ D+ ++ VSAS+D +I+W +K + + R S +V
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 582 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHS-GYLSCCRFLDDNQXLTSFG 758
+ G + G D ++ L +R GH+ LS LD+ Q +++
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 759 DMT 767
D T
Sbjct: 126 DRT 128
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/82 (21%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL+GH +I+++ + + + +++AS D + +W + + +S V+ ++ G
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 600 S-YVACGGLDNICSIYSLKTRE 662
+ +V+CG D + ++++ T E
Sbjct: 596 TQFVSCGA-DGLLKLWNVNTSE 616
Score = 34.7 bits (76), Expect = 0.069
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+T GH + + + +D VS DG L +W+ +T+ + V A
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 597 GSYVACGGLDNICSIY 644
+A GG D + +++
Sbjct: 637 TEMIATGGGDAVINLW 652
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.5 bits (78), Expect = 0.039
Identities = 30/127 (23%), Positives = 53/127 (41%)
Frame = +3
Query: 378 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 557
+L PIG +Q L G +H + ++ SQ+G L +W+ +T ++
Sbjct: 126 HLAPIGNLQ------LTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKG 179
Query: 558 RSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN 737
S V +C +P+ VA G D ++++K E V G ++ F D
Sbjct: 180 WGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEH---ASRGAVTALSFSTDG 236
Query: 738 QXLTSFG 758
+ L + G
Sbjct: 237 RPLLASG 243
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 444 IYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNKVHAI-PLRSSWVMTCAYAPSGSYVACG 617
+ A+ + +D R L+ S G + +W+ + I S +++ + + +
Sbjct: 227 VTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSA 286
Query: 618 GLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFG 758
DN ++ T +G+ R+ R GHS C RF + + + S G
Sbjct: 287 SADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAG 333
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 521
+ ++ R RGH +I + + D + ++S+S DG L +WD
Sbjct: 545 VTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TL GHL I + + + +VSAS D + +W+ + V + + +VM ++ P
Sbjct: 88 TLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKE 147
Query: 600 SYVACGGLDNICSIYSL 650
V LD ++ +
Sbjct: 148 DLVVSASLDQTVRVWDI 164
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
TLRGH+ + ++ + + +VS S+D + VWD+ + A P
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 600 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFL 728
+ +A G D+ ++ L+ RE R + L G S + + RFL
Sbjct: 303 NLLAAGH-DSGMIVFKLE-RE---RPAFALSGDSLFYAKDRFL 340
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D +S S DGK+ +WD V +R C Y P G G + C Y
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALC-YRPDGKGAVVGSMTGECRFY- 473
Query: 648 LKTREGNVRVSRELPGH 698
T + +++ R++ H
Sbjct: 474 -HTTDNQLQLDRDISLH 489
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 35.1 bits (77), Expect = 0.052
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +3
Query: 369 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 533
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 534 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 707
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 708 LSCCRFLDDNQXLTSFGDMT 767
+S RF+D + ++S D T
Sbjct: 665 VSYVRFVDSSTLVSSSTDNT 684
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMT-----C 581
T+ GH + + + DS LVS+S D L +WD S + + ++ PL S T
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 582 AYAPSGSYVACGGLDNICSIY 644
+ S Y+A G N +Y
Sbjct: 716 GLSVSDGYIATGSETNEVFVY 736
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 35.1 bits (77), Expect = 0.052
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Frame = +3
Query: 369 ATSNLEPIGRIQMRTRRTL----RGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTT 533
A+SN E + ++ R L + H +++++ + S D L S S DG + +W +
Sbjct: 550 ASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG 609
Query: 534 NKVHAIPLRSSWVMTCAYAPS--GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGY 707
+ I +++ + C PS G +A G D+ +Y R + + + GH
Sbjct: 610 VSIGTIKTKAN--ICCVQFPSETGRSLAFGSADH--KVYYYDLRNPKLPLCTMI-GHHKT 664
Query: 708 LSCCRFLDDNQXLTSFGDMT 767
+S RF+D + ++S D T
Sbjct: 665 VSYVRFVDSSTLVSSSTDNT 684
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMT-----C 581
T+ GH + + + DS LVS+S D L +WD S + + ++ PL S T
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 582 AYAPSGSYVACGGLDNICSIY 644
+ S Y+A G N +Y
Sbjct: 716 GLSVSDGYIATGSETNEVFVY 736
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 584
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 310 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 369
Query: 585 YAPSGSYVACGGLDNICSIYSLKT 656
+ G YVA + IY K+
Sbjct: 370 FTSDGRYVAMAEPADFVHIYDTKS 393
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 659
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 294 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 351
Query: 660 EGNVRVSRELPGHSGYLSCCRFLDDNQ 740
+V V L G+ G + RF D +
Sbjct: 352 SESVAV---LKGNLGAVRSIRFTSDGR 375
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSH-TTNKVHAIPLRSSWVMTCA 584
+T TL+GHL +A W + + +QD +WD+ + V + V +
Sbjct: 304 QTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIR 363
Query: 585 YAPSGSYVACGGLDNICSIYSLKT 656
+ G YVA + IY K+
Sbjct: 364 FTSDGRYVAMAEPADFVHIYDTKS 387
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/87 (24%), Positives = 35/87 (40%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR 659
+V DG L+ D+ + + + A+ P+G A G D C I+ +
Sbjct: 288 VVGDDPDGLLV--DTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKL 345
Query: 660 EGNVRVSRELPGHSGYLSCCRFLDDNQ 740
+V V L G+ G + RF D +
Sbjct: 346 SESVAV---LKGNLGAVRSIRFTSDGR 369
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 34.3 bits (75), Expect = 0.091
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 378 NLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH--AI 551
NL IQ +L G + ++Y++ G+D L + +QDG ++VW ++T A
Sbjct: 204 NLVKAWNIQNNADLSLNGPVGQVYSLVVGTDL--LFAGTQDGSILVWRYNSTTSCFDPAA 261
Query: 552 PLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
L + + + + G +DN ++SL
Sbjct: 262 SLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSL 294
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 34.3 bits (75), Expect = 0.091
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +3
Query: 369 ATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHA 548
A ++++ + +T T GH A + + D+ LV+ S+D +++W H K
Sbjct: 2646 ADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH---KAFT 2702
Query: 549 IPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTR-EGNVRVSRELPGHSGYLSCCRF 725
S T + APS + + L N + K R EG ++V R GH L CC
Sbjct: 2703 SRTSVSEPSTGSGAPSST--SNTNLANTLANKGKKCRLEGPIQVLR---GHRRELVCCCV 2757
Query: 726 LDDNQXLTS 752
D + S
Sbjct: 2758 SSDQGVVVS 2766
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 600 SYVACGGLDNICSIYSL 650
+ GG + I ++ +
Sbjct: 115 KSLLTGGFEKILRVFDM 131
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
T GH +++ +++ SAS D +WD+ T + +H+ V CA++
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDT 114
Query: 600 SYVACGGLDNICSIYSL 650
+ GG + I ++ +
Sbjct: 115 KSLLTGGFEKILRVFDM 131
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSR-NLVSASQDGKLIVWDSHT---TNKVHAIPL 557
H + I A W S +L+SAS DGK+++WD T T H+ PL
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAVMTKHTHSFPL 402
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/76 (19%), Positives = 38/76 (50%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYV 608
GH + ++ W LVS +D + +WD+ + ++ ++ + V++ + +G+++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 609 ACGGLDNICSIYSLKT 656
D I +Y ++T
Sbjct: 326 LTASKDQIIKLYDIRT 341
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMTCA 584
+T TL GHL +A W D + +QD VWD + + V + + +
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369
Query: 585 YAPSGSYVACGGLDNICSIYSL 650
Y G Y+A + +Y +
Sbjct: 370 YTSDGKYMAMAEPADFVHVYDV 391
>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 310
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 246 ELCVTRV-SIMNELDSLRQEAETLKNAIRDARK-AACDTSLAQATSNLEPIGRIQMR 410
ELC+ R+ S+M ELDSLR E ++L+ D K TS + + S PI Q R
Sbjct: 97 ELCLNRLQSLMTELDSLRHENDSLRFENSDLLKLIRISTSSSSSVSPPAPIHNRQFR 153
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/92 (25%), Positives = 43/92 (46%)
Frame = +3
Query: 276 NELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAM 455
+ELD L ++ E L + AACD + E R+ + G + ++
Sbjct: 152 SELDELDEKVEALDRHLA----AACDDGCVRIYYISESDKLTYYRSLPRVTG---RALSV 204
Query: 456 HWGSDSRNLVSASQDGKLIVWDSHTTNKVHAI 551
W +D++ + S S DG + WD++ ++V+ I
Sbjct: 205 TWSADAQRIFSGSSDGLIRCWDANLCHEVYRI 236
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSW--VM 575
++ + TL H + + W D L++ L +WD T H ++ V
Sbjct: 258 KVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVS 317
Query: 576 TCAYAPSGSYVACGGLD 626
+CA+ P + + CG D
Sbjct: 318 SCAWFPDSTRLVCGSSD 334
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSS 566
+I T + L H +++ + + + + L +AS D I+W NKV H + +
Sbjct: 211 QIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQN 270
Query: 567 WVMTCAYAPSGSYVACGGLDNICSIYSLKT 656
V +++P + + G + ++ + T
Sbjct: 271 PVSFVSWSPDDTKLLTCGNAEVLKLWDVDT 300
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 648 L 650
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D + +S S DGK+ +W + V R C Y P G V G L + C Y+
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVC-YQPDGQAVIIGTLTSDCRFYN 466
Query: 648 L 650
+
Sbjct: 467 V 467
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
++ H I AM + D R L SA +DG L VW
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVW 278
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 387 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 554
P G ++R ++L H AK+ + + S+S D +I+WD + + V +P
Sbjct: 3308 PRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLP 3363
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.1 bits (72), Expect = 0.21
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +3
Query: 447 YAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNKVHAIPLRSSWVMTCAYAPSGS-YV 608
Y H G+ + S S DG + VWD + V + S V + PSG V
Sbjct: 27 YTRHGGASTVG-ASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAV 85
Query: 609 ACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGD 761
A G D +Y ++ V + L GH+ +S RFLD +T+ D
Sbjct: 86 AVGCADRKGYVYDIRKL---VDPALTLQGHTKTVSYVRFLDGGTVVTAGTD 133
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +3
Query: 459 WGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAY---APSGSYVACGGLDN 629
W D R L ++++D T K+ A LR + Y AP+G Y+A GLD
Sbjct: 203 WSPDGRTLAVPGLRNDVVMYDRFTGEKLFA--LRGDHLEAICYLTWAPNGKYIATSGLDK 260
Query: 630 ICSIYSLKTRE 662
++ + ++
Sbjct: 261 QVLLWDVDKKQ 271
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 521
GH IYA+ W DS+ +++ S D VW+
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Frame = +3
Query: 447 YAMHWGSDSRNLVSASQDGKLI----------VWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+A+ W S N S S DGKL+ + DSH+ + ++ + A+ P+
Sbjct: 245 FALDW---SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPN 301
Query: 597 GSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDNQXL 746
G +A G D C ++ ++ + V L G+ G + +F + + L
Sbjct: 302 GLILATGNQDTACRLWDIRNPSESFAV---LKGNMGAIRGLKFTPEGRFL 348
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.7 bits (71), Expect = 0.28
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 521
GH IYA+ W D + +++ S D +WD
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/104 (21%), Positives = 39/104 (37%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGS 602
L+ H + I ++ L +AS D + +W+ + WV C ++ G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 603 YVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDD 734
Y+ D ++S+ R G + + H CC L D
Sbjct: 273 YLVTASSDTTARLWSM--RAGKEEMVYQ--AHRKATVCCTLLRD 312
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 648 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGD 761
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.7 bits (71), Expect = 0.28
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D +S S DGK+ +WD V +R C Y P G + C Y
Sbjct: 374 DDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYH 432
Query: 648 LKTREGNVRVSRELPGHSGYLSCCRFLDDNQXLTSFGD 761
+ E +++ +E+ H + + Q L S D
Sbjct: 433 I--FENQLQMDQEINVHGKKKVASKRISGLQYLPSDSD 468
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 599
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 600 SYVACGGLDNICSIYSL 650
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL-RSSWVMTCAYAPSG 599
L GH I+ + W D +VS S D +W+ + V + S V C S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCI--SD 288
Query: 600 SYVACGGLDNICSIYSL 650
S + G D C ++ +
Sbjct: 289 SLIVTAGEDCTCRVWGV 305
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 32.3 bits (70), Expect = 0.37
Identities = 19/60 (31%), Positives = 22/60 (36%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D R +S S D K+ VW V L C Y P G V G C +YS
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCRMYS 623
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 387 PIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIP 554
P G ++R + L H AK+ + + S S D +I+WD + + V +P
Sbjct: 3364 PRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLP 3419
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.9 bits (69), Expect = 0.49
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Frame = +3
Query: 516 WDSHTTNKVHAIPLRSSWV-------MTCAYAPSGSYVACGGLDNICSIYSLKTREGNVR 674
W S K H + + SW + A + G Y+A GG+D ++ ++TRE +V+
Sbjct: 184 WPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTRE-HVQ 242
Query: 675 VSR 683
V++
Sbjct: 243 VNK 245
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 342 AACDTSLAQA--TSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIV 515
AACD + SNLE ++ R+L + ++ W D++ + S S DG +
Sbjct: 170 AACDDGCVRLYRISNLE-----KLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRC 224
Query: 516 WDSHTTNKVHAI 551
WD+ + ++V+ I
Sbjct: 225 WDATSCHEVYRI 236
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL 650
LVS G + WDS + A V T A APS + V G D +Y L
Sbjct: 262 LVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKL 318
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/122 (20%), Positives = 47/122 (38%)
Frame = +3
Query: 366 QATSNLEPIGRIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 545
Q + EP+ ++Q GH+ K ++ L +AS D + +W+
Sbjct: 196 QTMTEFEPLHKLQAHN-----GHILKCLL---SPANKYLATASSDKTVKIWNVDGFKLEK 247
Query: 546 AIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
+ WV C ++ G ++ D ++S+ + V+V + GH CC
Sbjct: 248 VLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGK-EVKVYQ---GHHKATVCCAL 303
Query: 726 LD 731
D
Sbjct: 304 HD 305
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Frame = +3
Query: 480 LVSASQDGKLIVWDSHTTN-KVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSL-- 650
L+S Q+G + VWD + +P + V + G+ V C ++ L
Sbjct: 134 LISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLR 193
Query: 651 -KTREGNVRVSRELPGHSGYLSCCRFLDDNQXL-TSFGDMT 767
K +L H+G++ C N+ L T+ D T
Sbjct: 194 GKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKT 234
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Frame = +3
Query: 402 QMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC 581
+M+ + LRGH +Y + R +++ S D + +W T + + +
Sbjct: 294 KMQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDL 353
Query: 582 AYAPSGSYVACGGLDNICSIYSLKTREGNVRVSRELPGHSGYLSCCRFLDDN----QXLT 749
A + + + VA D + ++ L + +S L GH+G ++ F Q L+
Sbjct: 354 AVSSNNALVASASNDFVIRVWRL---PDGMPIS-VLRGHTGAVTAIAFSPRQASVYQLLS 409
Query: 750 SFGDMTC 770
S D TC
Sbjct: 410 SSDDGTC 416
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGS-DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 599
L GH Y + + R +SA DGK I+WD + + ++ ++ G
Sbjct: 635 LTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDG 694
Query: 600 SYVACGGLDNICSIYSLKTREG 665
+ + D++ IY L T +G
Sbjct: 695 TSIVLS--DDVGQIYFLNTGQG 714
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 557
+L GH ++ + S L S S DG L VWD ++ VH+I L
Sbjct: 126 SLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNK-VHAIP 554
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 205 RIRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFE 264
Query: 555 LRSSWVMTCAYAP-SGSYVACGG 620
++ V A+ P S +A GG
Sbjct: 265 EHTAAVRALAWCPFQASLLATGG 287
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +3
Query: 468 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYS 647
D +S S D K+ +W+ V L+ C Y P G G ++ C +YS
Sbjct: 571 DEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVC-YTPDGQAAFVGSINGHCRLYS 629
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.1 bits (67), Expect = 0.85
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-----SHTTNK-VHAIPL 557
RI+ T GH ++ + W + L S D + +WD S+ T + +H
Sbjct: 223 RIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEE 282
Query: 558 RSSWVMTCAYAP-SGSYVACGG 620
++ V A+ P S +A GG
Sbjct: 283 HTAAVRALAWCPFQASLLATGG 304
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW----DSHTTNKVHAIPLRSSWVMTCAY 587
TL GH K+ ++ + D+ +++AS D + +W D + T++ H + S+ V
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR-HTLKDHSAEVRAVTV 317
Query: 588 APSGSYVACGGLDNICSIYSLKT 656
+ Y LD+ Y L +
Sbjct: 318 HATNKYFVSASLDSTWCFYDLSS 340
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRS 563
L GH I + S L S S DG L++WD ++ V +I L++
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQA 229
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRN-------LVSASQDGKLIVWDSHT-----TNKVHAIPLRSS 566
L GH +++++ W S + L S S D + +W+ + T K +
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 567 WVMTCAYAPSGSYVACGGLDNICSIY 644
V +CA++PSG +A D I+
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIW 101
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSS----WVM 575
+ + T +GH ++ + S + +++ S+DG +WD T V I + V
Sbjct: 192 KIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVS 251
Query: 576 TCAYAPSGSYVACGGLDNICSIYSLKTRE 662
+ A S S++ CG N+ ++++L E
Sbjct: 252 SMALDGSESWLVCGQGKNL-ALWNLPASE 279
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW--DSHTTNKVHAIPLR 560
R +GH K++++ W S+ L S S D +W + H +K + L+
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELK 63
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 513 VWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTRE 662
V+D T K+ L T A + G Y+A GG D S+ +KT E
Sbjct: 238 VYDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTME 287
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP-SG 599
L GH + + W SDS L+SAS+D + +W + +H +++V + P +
Sbjct: 268 LYGHTGDVLDLAW-SDSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNK 325
Query: 600 SYVACGGLDNICSIYSL 650
+ A G +D I+ L
Sbjct: 326 NNFASGSIDGKARIWGL 342
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
+ GH KI+ + + D + L + +DG + +W
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 539
GH A + + W D ++ S+++DG L +WD K
Sbjct: 373 GHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGK 410
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLV-SASQDGKLIVWDSHTTNK 539
GH A + + W D ++ S+++DG L +WD +K
Sbjct: 384 GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSK 421
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHTT 533
L GH + Y + W S L+S SQD ++ +WD T
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSAT 202
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 530
H + + W + RN L SAS D K+ VWD T
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVAT 297
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRN-LVSASQDGKLIVWDSHT 530
H + + W + RN L SAS D K+ VWD T
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVAT 265
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 611
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 77 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 136
Query: 612 CGGLDNICSIYS 647
CG + +YS
Sbjct: 137 CGTQNGTLLLYS 148
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 611
H I M + SDS LV S DG L V + T+ +++ +G V
Sbjct: 134 HEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVI 193
Query: 612 CGGLDNICSIYS 647
CG + +YS
Sbjct: 194 CGTQNGTLLLYS 205
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 590
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 591 PSGSYVACGGLDNICSIYSLKTREGNVRVS 680
P+ Y LD Y L + +VS
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVS 348
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV---HAIPLRSSWVMTCAYA 590
TL GH K+ ++ + DS +++AS D + +W + + + S+ V
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVH 318
Query: 591 PSGSYVACGGLDNICSIYSLKTREGNVRVS 680
P+ Y LD Y L + +VS
Sbjct: 319 PTNKYFVSASLDGTWCFYDLSSGSCLAQVS 348
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +3
Query: 420 TLRGHLAKIYAMHW--GSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
TL HL + + + G D L++ S D VWD T + V + + V ++ P
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHP 239
Query: 594 SGSYVACGGLDNICSIYSLKT 656
+ G D I+ T
Sbjct: 240 ELPIIITGSEDGTVRIWHATT 260
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Frame = +3
Query: 396 RIQMRTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD------SHTTNKVHAIPL 557
RI+ T GH ++ + W S D + +WD T +H
Sbjct: 239 RIRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEE 298
Query: 558 RSSWVMTCAYAP-SGSYVACGG 620
++ V A+ P S +A GG
Sbjct: 299 HTAAVRALAWCPFQASLLATGG 320
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 423 LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD 521
L+GH + + + + +S +++AS+DG + VW+
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 429 GHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
GH + + + D LVS SQDG + VW
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 706
Query: 534 NKVHAIPLRSSWVMTCAYAPS 596
+ +H + + + + PS
Sbjct: 707 DCIHELSNSGNKFHSVVFHPS 727
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 534 NKVHAIPLRSSWVMTCAYAPS 596
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 534 NKVHAIPLRSSWVMTCAYAPS 596
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 534 NKVHAIPLRSSWVMTCAYAPS 596
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 360 LAQATSNLEPIGRIQMRTRRT--LRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTT 533
LA A+ N I I+ +R +GH + ++++ W + + S S+D + +W +
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDA-VKLWSLSSG 708
Query: 534 NKVHAIPLRSSWVMTCAYAPS 596
+ +H + + + + PS
Sbjct: 709 DCIHELSNSGNKFHSVVFHPS 729
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKV 542
+ + L GH KI + + LVS+ DGKL +W + + K+
Sbjct: 502 KVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 546
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Frame = +3
Query: 486 SASQDGKLIVWD----SHTTNKVHAIPLRSSWVMTCAYA----------PSGSYVACGGL 623
SAS DG + VWD S + + + L S V T A P +A GGL
Sbjct: 139 SASSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGL 198
Query: 624 DNICSIYSLKTREGNVRVSRELPGHSGYLSCCRF 725
DN +YS R G EL GH+ ++ F
Sbjct: 199 DNKIKLYS-GERTGKFTSVCELKGHTDWIRSLDF 231
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/108 (19%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +3
Query: 432 HLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVA 611
H + A+ + + + S DG + D H+ N + + V + +P G +
Sbjct: 115 HPGGVNAVSSSAKASCIYSGGADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKIL- 173
Query: 612 CGGLDNICSIYSLKTRE-GNVRVSRELPGHSGYLSCCRFLDDNQXLTS 752
+ + LKT +++ ++ GH G + C F +D + + S
Sbjct: 174 ------VTASTQLKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLS 215
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTN 536
TL GH + + + DS +VSAS D L +W+ + TN
Sbjct: 889 TLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWNLNKTN 926
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
RT + H +Y W ++ SAS D L +WD IP +++C +
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNK 202
Query: 594 -SGSYVACGGLDNICSIYSLKT 656
+A +D ++ +++
Sbjct: 203 YDDCILATSSVDKTVKVWDVRS 224
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
RT LRGH + + S+ + L ++ D ++IVW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 444 IYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH-AIPLRSSWVMTCAYAPSGSYVACGG 620
+ ++ + D ++L+S+ DG++ VWD T ++ + S+ + + +G+ A G
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 436
Query: 621 LDNICSIYSLKTREGNVR 674
I +IY G R
Sbjct: 437 DRGIVNIYKKSEFVGGKR 454
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 408 RTRRTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVW 518
RT LRGH + + S+ + L ++ D +++VW
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At4g25250.1 68417.m03633 invertase/pectin methylesterase inhibitor
family protein similar to pectinesterase from
Arabidopsis thaliana SP|Q42534, Lycopersicon esculentum
SP|Q43143; contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 199
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 433 ISRRSTPCTGAAIPGTWCRPVRMVS*SCGTATRPTRC 543
I+ + P T A PGT+ V +C + T PT C
Sbjct: 15 INSSNFPKTAATPPGTYQNHTTYVKTACNSTTYPTMC 51
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWD-SHTTNKVHAIPLRSSWVMT-----C 581
T+ GH + + + DS LVS+S D L +WD S + + ++ PL S T
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFV 757
Query: 582 AYAPSGSYVACGGLDNICSIY 644
+ S Y+A G N +Y
Sbjct: 758 GLSVSDGYIATGSETNEVFVY 778
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 399 IQMRTRRTLRGHLAKIYAM-HWGSDSRNLVSASQDGKLIVW 518
I R RGH ++ M + D L S S DGK+ VW
Sbjct: 209 INTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVW 249
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 RTLRGHLAKI-YAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAP 593
RTLR H A + + D +LVS DG + WD + + +V +P
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 594 -SGSYVACGGLDNICSIYSLKTREGN 668
+ S + G D+ ++ + N
Sbjct: 189 VNDSMLVTGSYDHTVKVWDARVHTSN 214
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 420 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVH 545
T+ H I AM W L + S D L WD+ N VH
Sbjct: 109 TVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVH 150
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +3
Query: 417 RTLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPS 596
+TL GH + A+ + + +++ S+DG + +W + T + + V Y S
Sbjct: 223 QTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKS 282
Query: 597 GSYVACG 617
V G
Sbjct: 283 SRRVVIG 289
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,940,862
Number of Sequences: 28952
Number of extensions: 322040
Number of successful extensions: 1365
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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